RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 COBLL1Q53SF7 1204 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 HSP90AB4PQ58FF6 505 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 MIIPQ5JXC2 388 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 NXNQ6DKJ4 435 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 TIGD7Q6NT04 549 aaPredicted RBP2.86□□□□□ -1.95
CALD1-216ENST00000473714 RASSF3Q86WH2 238 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 DGKHQ86XP1 1220 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 TEX2Q8IWB9 1127 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 ZZZ3Q8IYH5 903 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 ADSSL1Q8N142 457 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 CPA6Q8N4T0 437 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 SAMD3Q8N6K7 520 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 CLRN3Q8NCR9 226 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 WDR48Q8TAF3 677 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 ERCC4Q92889 916 aaPredicted RBP2.86□□□□□ -1.95
CALD1-216ENST00000473714 TIFAQ96CG3 184 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 PEX11GQ96HA9 241 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 WWC2-AS2Q96NR7 200 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 GORASP1Q9BQQ3 440 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 ORAI3Q9BRQ5 295 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 C11orf84Q9BUA3 381 aaPredicted RBP2.86□□□□□ -1.95
CALD1-216ENST00000473714 RTFDC1Q9BY42 306 aaPredicted RBP2.86□□□□□ -1.95
CALD1-216ENST00000473714 EPB41L1Q9H4G0 881 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 VTA1Q9NP79 307 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 ACSS2Q9NR19 701 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 MAN1C1Q9NR34 630 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 DNAJC28Q9NX36 388 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 OBP2AQ9NY56 170 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 PPARGC1AQ9UBK2 798 aaKnown RBP2.86□□□□□ -1.95
CALD1-216ENST00000473714 GULP1Q9UBP9 304 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 NUDT5Q9UKK9 219 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 DSEQ9UL01 958 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 PNMA8BQ9ULN7 279 aaPredicted RBP2.86□□□□□ -1.95
CALD1-216ENST00000473714 CBLCQ9ULV8 474 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 FAM50BQ9Y247 325 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 ZBTB1Q9Y2K1 713 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 RWDD3Q9Y3V2 267 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 ATP23Q9Y6H3 246 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 PFASO15067 1338 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 FRMPD2Q68DX3 1309 aaPredicted RBP2.86□□□□□ -1.95
CALD1-216ENST00000473714 MYPNQ86TC9 1320 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 KTN1Q86UP2 1357 aaKnown RBP2.86□□□□□ -1.95
CALD1-216ENST00000473714 KMT2EQ8IZD2 1858 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 GVINP1Q7Z2Y8 2422 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 DMXL1Q9Y485 3027 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 MAST2Q6P0Q8 1798 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 YDJCA8MPS7 323 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 AP1G1O43747 822 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 CREB3O43889 395 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 CTNND1O60716 968 aaKnown RBP2.85□□□□□ -1.95
CALD1-216ENST00000473714 OFD1O75665 1012 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 ABLIM3O94929 683 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 CYP1A1P04798 512 aaPredicted RBP2.85□□□□□ -1.95
CALD1-216ENST00000473714 CYP17A1P05093 508 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 CYP19A1P11511 503 aaPredicted RBP2.85□□□□□ -1.95
CALD1-216ENST00000473714 COL6A1P12109 1028 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 PHKG2P15735 406 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 FPR2P25090 351 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 AMPHP49418 695 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 CYP4F3Q08477 520 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 GTF2H3Q13889 308 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 TERF2Q15554 542 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 UAP1L1Q3KQV9 507 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 NRN1LQ496H8 165 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 LONRF3Q496Y0 759 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 CCDC157Q569K6 752 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 ARHGEF18Q6ZSZ5 1173 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 TSHZ1Q6ZSZ6 1077 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 IFNL2Q8IZJ0 200 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 CAMKK1Q8N5S9 505 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 LZTR1Q8N653 840 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 PPM1NQ8N819 430 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 KYQ8NBH2 561 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 ACRBPQ8NEB7 543 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 SUPT20HQ8NEM7 779 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 C1orf162Q8NEQ5 155 aaPredicted RBP2.85□□□□□ -1.95
CALD1-216ENST00000473714 PIP4K2CQ8TBX8 421 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 TGFBRAP1Q8WUH2 860 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 FERMT2Q96AC1 680 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 TTC17Q96AE7 1141 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 TNIP3Q96KP6 325 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 ELF4Q99607 663 aaPredicted RBP2.85□□□□□ -1.95
CALD1-216ENST00000473714 RHOBTB2Q9BYZ6 727 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 SLC13A1Q9BZW2 595 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 TOPORSQ9NS56 1045 aaPredicted RBP2.85□□□□□ -1.95
CALD1-216ENST00000473714 RIC8BQ9NVN3 520 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 SPO11Q9Y5K1 396 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 GBF1Q92538 1859 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 DMDP11532 3685 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 SCN9AQ15858 1988 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 A0A0G2JMZ2 1700 aa2.85□□□□□ -1.95
CALD1-216ENST00000473714 PTPN13Q12923 2485 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 GCN1Q92616 2671 aaKnown RBP2.84□□□□□ -1.95
CALD1-216ENST00000473714 ST20-MTHFSA0A0A6YYL1 179 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 PRAMEF25A6NGN4 478 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 PSMD14O00487 310 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 TCERG1O14776 1098 aaKnown RBP2.84□□□□□ -1.95
CALD1-216ENST00000473714 PRPF3O43395 683 aaKnown RBP2.84□□□□□ -1.95
CALD1-216ENST00000473714 WDHD1O75717 1129 aaPredicted RBP2.84□□□□□ -1.95
CALD1-216ENST00000473714 FOSP01100 380 aaPredicted RBP2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms