RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 E9PMD0 336 aa13.81□□□□□ -0.2
TRAF4-209ENST00000473421 ZNF197O14709 1029 aa13.81□□□□□ -0.2
TRAF4-209ENST00000473421 SYN3O14994 580 aa13.81□□□□□ -0.2
TRAF4-209ENST00000473421 OR52Z1P0C646 297 aa13.81□□□□□ -0.2
TRAF4-209ENST00000473421 HARSP12081 509 aaKnown RBP13.81□□□□□ -0.2
TRAF4-209ENST00000473421 KCNA4P22459 653 aa13.81□□□□□ -0.2
TRAF4-209ENST00000473421 PXNP49023 591 aaPredicted RBP13.81□□□□□ -0.2
TRAF4-209ENST00000473421 GUCY2FP51841 1108 aa13.81□□□□□ -0.2
TRAF4-209ENST00000473421 EFNA5P52803 228 aa13.81□□□□□ -0.2
TRAF4-209ENST00000473421 NRLP54845 237 aa13.81□□□□□ -0.2
TRAF4-209ENST00000473421 PPP2R5AQ15172 486 aa13.81□□□□□ -0.2
TRAF4-209ENST00000473421 CSRP2Q16527 193 aa13.81□□□□□ -0.2
TRAF4-209ENST00000473421 TPGS2Q68CL5 300 aa13.81□□□□□ -0.2
TRAF4-209ENST00000473421 KCNK18Q7Z418 384 aa13.81□□□□□ -0.2
TRAF4-209ENST00000473421 SPEM1Q8N4L4 309 aa13.81□□□□□ -0.2
TRAF4-209ENST00000473421 ZNF512Q96ME7 567 aaPredicted RBP13.81□□□□□ -0.2
TRAF4-209ENST00000473421 TMEM209Q96SK2 561 aa13.81□□□□□ -0.2
TRAF4-209ENST00000473421 RUSC1Q9BVN2 902 aa13.81□□□□□ -0.2
TRAF4-209ENST00000473421 GTSE1Q9NYZ3 720 aa13.81□□□□□ -0.2
TRAF4-209ENST00000473421 CNTN3Q9P232 1028 aa13.81□□□□□ -0.2
TRAF4-209ENST00000473421 ARHGAP28Q9P2N2 729 aa13.81□□□□□ -0.2
TRAF4-209ENST00000473421 AFF4Q9UHB7 1163 aaKnown RBP13.81□□□□□ -0.2
TRAF4-209ENST00000473421 RAB23Q9ULC3 237 aa13.81□□□□□ -0.2
TRAF4-209ENST00000473421 KIAA1024Q9UPX6 916 aa13.81□□□□□ -0.2
TRAF4-209ENST00000473421 YIPF1Q9Y548 306 aa13.81□□□□□ -0.2
TRAF4-209ENST00000473421 NUB1Q9Y5A7 615 aa13.81□□□□□ -0.2
TRAF4-209ENST00000473421 CITO14578 2027 aa13.81□□□□□ -0.2
TRAF4-209ENST00000473421 H7C4K7 107 aa13.8□□□□□ -0.2
TRAF4-209ENST00000473421 TM4SF5O14894 197 aa13.8□□□□□ -0.2
TRAF4-209ENST00000473421 EXTL3O43909 919 aa13.8□□□□□ -0.2
TRAF4-209ENST00000473421 HIP1RO75146 1068 aa13.8□□□□□ -0.2
TRAF4-209ENST00000473421 CDC25AP30304 524 aa13.8□□□□□ -0.2
TRAF4-209ENST00000473421 MCM4P33991 863 aa13.8□□□□□ -0.2
TRAF4-209ENST00000473421 CCT6AP40227 531 aaKnown RBP13.8□□□□□ -0.2
TRAF4-209ENST00000473421 TNK2Q07912 1038 aa13.8□□□□□ -0.2
TRAF4-209ENST00000473421 DUSP4Q13115 394 aa13.8□□□□□ -0.2
TRAF4-209ENST00000473421 IL17AQ16552 155 aa13.8□□□□□ -0.2
TRAF4-209ENST00000473421 N4BP2L1Q5TBK1 243 aaPredicted RBP13.8□□□□□ -0.2
TRAF4-209ENST00000473421 GAREM2Q75VX8 874 aa13.8□□□□□ -0.2
TRAF4-209ENST00000473421 ARID3BQ8IVW6 561 aaPredicted RBP13.8□□□□□ -0.2
TRAF4-209ENST00000473421 BEST2Q8NFU1 509 aa13.8□□□□□ -0.2
TRAF4-209ENST00000473421 DEPDC1BQ8WUY9 529 aa13.8□□□□□ -0.2
TRAF4-209ENST00000473421 IFT74Q96LB3 600 aa13.8□□□□□ -0.2
TRAF4-209ENST00000473421 ACAP3Q96P50 834 aa13.8□□□□□ -0.2
TRAF4-209ENST00000473421 CCDC94Q9BW85 323 aaPredicted RBP13.8□□□□□ -0.2
TRAF4-209ENST00000473421 SMOC1Q9H4F8 434 aa13.8□□□□□ -0.2
TRAF4-209ENST00000473421 DDX19AQ9NUU7 478 aaKnown RBP13.8□□□□□ -0.2
TRAF4-209ENST00000473421 SLC27A5Q9Y2P5 690 aa13.8□□□□□ -0.2
TRAF4-209ENST00000473421 SPECC1L-ADORA2AF8WAN1 911 aa13.79□□□□□ -0.2
TRAF4-209ENST00000473421 PPEF2O14830 753 aa13.79□□□□□ -0.2
TRAF4-209ENST00000473421 AXIN1O15169 862 aa13.79□□□□□ -0.2
TRAF4-209ENST00000473421 SLC16A4O15374 487 aa13.79□□□□□ -0.2
TRAF4-209ENST00000473421 PRAMEF12O95522 483 aa13.79□□□□□ -0.2
TRAF4-209ENST00000473421 CPB1P15086 417 aa13.79□□□□□ -0.2
TRAF4-209ENST00000473421 CTHP32929 405 aa13.79□□□□□ -0.2
TRAF4-209ENST00000473421 YARSP54577 528 aaKnown RBP13.79□□□□□ -0.2
TRAF4-209ENST00000473421 FCHO2Q0JRZ9 810 aa13.79□□□□□ -0.2
TRAF4-209ENST00000473421 PON2Q15165 354 aa13.79□□□□□ -0.2
TRAF4-209ENST00000473421 IQCEQ6IPM2 695 aa13.79□□□□□ -0.2
TRAF4-209ENST00000473421 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.79□□□□□ -0.2
TRAF4-209ENST00000473421 ATAD1Q8NBU5 361 aa13.79□□□□□ -0.2
TRAF4-209ENST00000473421 KIFAP3Q92845 792 aa13.79□□□□□ -0.2
TRAF4-209ENST00000473421 CHFRQ96EP1 664 aa13.79□□□□□ -0.2
TRAF4-209ENST00000473421 CHAMP1Q96JM3 812 aa13.79□□□□□ -0.2
TRAF4-209ENST00000473421 MRPL4Q9BYD3 311 aaKnown RBP13.79□□□□□ -0.2
TRAF4-209ENST00000473421 SMG9Q9H0W8 520 aaKnown RBP13.79□□□□□ -0.2
TRAF4-209ENST00000473421 SLITRK6Q9H5Y7 841 aa13.79□□□□□ -0.2
TRAF4-209ENST00000473421 ASAH2Q9NR71 780 aa13.79□□□□□ -0.2
TRAF4-209ENST00000473421 TOPORSQ9NS56 1045 aaPredicted RBP13.79□□□□□ -0.2
TRAF4-209ENST00000473421 SLC38A7Q9NVC3 462 aa13.79□□□□□ -0.2
TRAF4-209ENST00000473421 PCDHB8Q9UN66 801 aa13.79□□□□□ -0.2
TRAF4-209ENST00000473421 MYBPHLA2RUH7 354 aa13.78□□□□□ -0.2
TRAF4-209ENST00000473421 CHADO15335 359 aa13.78□□□□□ -0.2
TRAF4-209ENST00000473421 LRP3O75074 770 aa13.78□□□□□ -0.2
TRAF4-209ENST00000473421 MCF2P10911 925 aa13.78□□□□□ -0.2
TRAF4-209ENST00000473421 RPL9P32969 192 aaKnown RBP13.78□□□□□ -0.2
TRAF4-209ENST00000473421 KPNA1P52294 538 aaPredicted RBP13.78□□□□□ -0.2
TRAF4-209ENST00000473421 CACNB1Q02641 598 aaPredicted RBP13.78□□□□□ -0.2
TRAF4-209ENST00000473421 RAD51AP2Q09MP3 1159 aa13.78□□□□□ -0.2
TRAF4-209ENST00000473421 CCINQ13939 588 aa13.78□□□□□ -0.2
TRAF4-209ENST00000473421 ZNF280DQ6N043 979 aa13.78□□□□□ -0.2
TRAF4-209ENST00000473421 MPZL3Q6UWV2 235 aa13.78□□□□□ -0.2
TRAF4-209ENST00000473421 LONP2Q86WA8 852 aa13.78□□□□□ -0.2
TRAF4-209ENST00000473421 TCHPQ9BT92 498 aa13.78□□□□□ -0.2
TRAF4-209ENST00000473421 MMTAG2Q9BU76 263 aaKnown RBP13.78□□□□□ -0.2
TRAF4-209ENST00000473421 ARRDC1-AS1Q9H2J1 176 aa13.78□□□□□ -0.2
TRAF4-209ENST00000473421 TMEM134Q9H6X4 195 aa13.78□□□□□ -0.2
TRAF4-209ENST00000473421 PHLPP2Q6ZVD8 1323 aa13.78□□□□□ -0.2
TRAF4-209ENST00000473421 EML5Q05BV3 1969 aa13.78□□□□□ -0.2
TRAF4-209ENST00000473421 OTOL1A6NHN0 477 aaPredicted RBP13.77□□□□□ -0.21
TRAF4-209ENST00000473421 M0QZQ0 153 aa13.77□□□□□ -0.21
TRAF4-209ENST00000473421 OAZ2O95190 189 aa13.77□□□□□ -0.21
TRAF4-209ENST00000473421 PAPSS2O95340 614 aaPredicted RBP13.77□□□□□ -0.21
TRAF4-209ENST00000473421 CXCL8P10145 99 aa13.77□□□□□ -0.21
TRAF4-209ENST00000473421 ANK1P16157 1881 aa13.77□□□□□ -0.21
TRAF4-209ENST00000473421 PMLP29590 882 aa13.77□□□□□ -0.21
TRAF4-209ENST00000473421 TNFSF9P41273 254 aa13.77□□□□□ -0.21
TRAF4-209ENST00000473421 TOB1P50616 345 aaPredicted RBP13.77□□□□□ -0.21
TRAF4-209ENST00000473421 ZBTB6Q15916 424 aa13.77□□□□□ -0.21
TRAF4-209ENST00000473421 NAIF1Q69YI7 327 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms