RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 POLIQ9UNA4 740 aa24.42■■□□□ 1.5
PTP4A1-203ENST00000473334 TSC2P49815 1807 aa24.41■■□□□ 1.5
PTP4A1-203ENST00000473334 PIRO00625 290 aa24.41■■□□□ 1.5
PTP4A1-203ENST00000473334 OAZ2O95190 189 aa24.41■■□□□ 1.5
PTP4A1-203ENST00000473334 FSHRP23945 695 aa24.41■■□□□ 1.5
PTP4A1-203ENST00000473334 LILRA4P59901 499 aa24.41■■□□□ 1.5
PTP4A1-203ENST00000473334 ARMCX5Q6P1M9 558 aa24.41■■□□□ 1.5
PTP4A1-203ENST00000473334 USP37Q86T82 979 aa24.41■■□□□ 1.5
PTP4A1-203ENST00000473334 EFCAB13Q8IY85 973 aa24.41■■□□□ 1.5
PTP4A1-203ENST00000473334 CEP57L1Q8IYX8 460 aa24.41■■□□□ 1.5
PTP4A1-203ENST00000473334 ZSWIM2Q8NEG5 633 aa24.41■■□□□ 1.5
PTP4A1-203ENST00000473334 PBXIP1Q96AQ6 731 aa24.41■■□□□ 1.5
PTP4A1-203ENST00000473334 DPP3Q9NY33 737 aa24.41■■□□□ 1.5
PTP4A1-203ENST00000473334 IGSF9Q9P2J2 1179 aa24.41■■□□□ 1.5
PTP4A1-203ENST00000473334 ATP6V1DQ9Y5K8 247 aa24.41■■□□□ 1.5
PTP4A1-203ENST00000473334 TIMM13Q9Y5L4 95 aaPredicted RBP24.41■■□□□ 1.5
PTP4A1-203ENST00000473334 SCN1AP35498 2009 aa24.4■■□□□ 1.5
PTP4A1-203ENST00000473334 ARHGEF37A1IGU5 675 aa24.4■■□□□ 1.5
PTP4A1-203ENST00000473334 PRRG1O14668 218 aa24.4■■□□□ 1.5
PTP4A1-203ENST00000473334 KIAA0391O15091 583 aaKnown RBP24.4■■□□□ 1.5
PTP4A1-203ENST00000473334 EXTL3O43909 919 aa24.4■■□□□ 1.5
PTP4A1-203ENST00000473334 ODC1P11926 461 aa24.4■■□□□ 1.5
PTP4A1-203ENST00000473334 TYMPP19971 482 aa24.4■■□□□ 1.5
PTP4A1-203ENST00000473334 CASP1P29466 404 aa24.4■■□□□ 1.5
PTP4A1-203ENST00000473334 NTHL1P78549 312 aa24.4■■□□□ 1.5
PTP4A1-203ENST00000473334 BECN1Q14457 450 aa24.4■■□□□ 1.5
PTP4A1-203ENST00000473334 BLZF1Q9H2G9 400 aa24.4■■□□□ 1.5
PTP4A1-203ENST00000473334 SMOC2Q9H3U7 446 aa24.4■■□□□ 1.5
PTP4A1-203ENST00000473334 PCIF1Q9H4Z3 704 aa24.4■■□□□ 1.5
PTP4A1-203ENST00000473334 KCNK12Q9HB15 430 aa24.4■■□□□ 1.5
PTP4A1-203ENST00000473334 RBAKQ9NYW8 714 aaPredicted RBP24.4■■□□□ 1.5
PTP4A1-203ENST00000473334 TCHHQ07283 1943 aa24.39■■□□□ 1.5
PTP4A1-203ENST00000473334 GOLGA8IPA6NC78 632 aa24.39■■□□□ 1.49
PTP4A1-203ENST00000473334 GOLGA8JA6NMD2 632 aa24.39■■□□□ 1.49
PTP4A1-203ENST00000473334 LRG1P02750 347 aa24.39■■□□□ 1.49
PTP4A1-203ENST00000473334 CPB1P15086 417 aa24.39■■□□□ 1.49
PTP4A1-203ENST00000473334 AFMP43652 599 aa24.39■■□□□ 1.49
PTP4A1-203ENST00000473334 EHHADHQ08426 723 aa24.39■■□□□ 1.49
PTP4A1-203ENST00000473334 TDGQ13569 410 aa24.39■■□□□ 1.49
PTP4A1-203ENST00000473334 EPM2AIP1Q7L775 607 aaPredicted RBP24.39■■□□□ 1.49
PTP4A1-203ENST00000473334 TCEAL8Q8IYN2 117 aa24.39■■□□□ 1.49
PTP4A1-203ENST00000473334 CHAMP1Q96JM3 812 aa24.39■■□□□ 1.49
PTP4A1-203ENST00000473334 SENP8Q96LD8 212 aa24.39■■□□□ 1.49
PTP4A1-203ENST00000473334 CYP4F11Q9HBI6 524 aa24.39■■□□□ 1.49
PTP4A1-203ENST00000473334 AFF4Q9UHB7 1163 aaKnown RBP24.39■■□□□ 1.49
PTP4A1-203ENST00000473334 SERTAD1Q9UHV2 236 aa24.39■■□□□ 1.49
PTP4A1-203ENST00000473334 MAFFQ9ULX9 164 aa24.39■■□□□ 1.49
PTP4A1-203ENST00000473334 ARIH1Q9Y4X5 557 aaPredicted RBP24.39■■□□□ 1.49
PTP4A1-203ENST00000473334 UBE4BO95155 1302 aa24.38■■□□□ 1.49
PTP4A1-203ENST00000473334 SPTLC1O15269 473 aa24.38■■□□□ 1.49
PTP4A1-203ENST00000473334 SLFN14P0C7P3 912 aa24.38■■□□□ 1.49
PTP4A1-203ENST00000473334 LAMP2P13473 410 aa24.38■■□□□ 1.49
PTP4A1-203ENST00000473334 CMA1P23946 247 aa24.38■■□□□ 1.49
PTP4A1-203ENST00000473334 TAF6P49848 677 aa24.38■■□□□ 1.49
PTP4A1-203ENST00000473334 WNT7BP56706 349 aa24.38■■□□□ 1.49
PTP4A1-203ENST00000473334 CUL4BQ13620 913 aa24.38■■□□□ 1.49
PTP4A1-203ENST00000473334 OVOS1Q6IE37 1185 aa24.38■■□□□ 1.49
PTP4A1-203ENST00000473334 GPD1LQ8N335 351 aa24.38■■□□□ 1.49
PTP4A1-203ENST00000473334 ZNF507Q8TCN5 953 aa24.38■■□□□ 1.49
PTP4A1-203ENST00000473334 NOC3LQ8WTT2 800 aaKnown RBP24.38■■□□□ 1.49
PTP4A1-203ENST00000473334 NXPE3Q969Y0 559 aa24.38■■□□□ 1.49
PTP4A1-203ENST00000473334 HCFC1R1Q9NWW0 138 aa24.38■■□□□ 1.49
PTP4A1-203ENST00000473334 DNMT3BQ9UBC3 853 aaKnown RBP24.38■■□□□ 1.49
PTP4A1-203ENST00000473334 INSL5Q9Y5Q6 135 aa24.38■■□□□ 1.49
PTP4A1-203ENST00000473334 ZFP37Q9Y6Q3 630 aaPredicted RBP24.38■■□□□ 1.49
PTP4A1-203ENST00000473334 NOTCH4Q99466 2003 aa24.37■■□□□ 1.49
PTP4A1-203ENST00000473334 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.37■■□□□ 1.49
PTP4A1-203ENST00000473334 PVALEFA0A1B0GWK0 134 aa24.37■■□□□ 1.49
PTP4A1-203ENST00000473334 OR6C75A6NL08 312 aa24.37■■□□□ 1.49
PTP4A1-203ENST00000473334 ACTN4O43707 911 aaKnown RBP24.37■■□□□ 1.49
PTP4A1-203ENST00000473334 SEC24AO95486 1093 aa24.37■■□□□ 1.49
PTP4A1-203ENST00000473334 PFKFB1P16118 471 aa24.37■■□□□ 1.49
PTP4A1-203ENST00000473334 HOXD13P35453 343 aa24.37■■□□□ 1.49
PTP4A1-203ENST00000473334 ADCY1Q08828 1119 aa24.37■■□□□ 1.49
PTP4A1-203ENST00000473334 PABPC1LQ4VXU2 614 aaKnown RBP24.37■■□□□ 1.49
PTP4A1-203ENST00000473334 RNF19BQ6ZMZ0 732 aa24.37■■□□□ 1.49
PTP4A1-203ENST00000473334 SUGP1Q8IWZ8 645 aaKnown RBP24.37■■□□□ 1.49
PTP4A1-203ENST00000473334 FBXL6Q8N531 539 aa24.37■■□□□ 1.49
PTP4A1-203ENST00000473334 DUSP12Q9UNI6 340 aa24.37■■□□□ 1.49
PTP4A1-203ENST00000473334 A0A1B0GVL5 298 aa24.36■■□□□ 1.49
PTP4A1-203ENST00000473334 TULP1O00294 542 aaPredicted RBP24.36■■□□□ 1.49
PTP4A1-203ENST00000473334 CYP11A1P05108 521 aa24.36■■□□□ 1.49
PTP4A1-203ENST00000473334 TFAMQ00059 246 aaKnown RBP24.36■■□□□ 1.49
PTP4A1-203ENST00000473334 GRAMD1CQ8IYS0 662 aa24.36■■□□□ 1.49
PTP4A1-203ENST00000473334 CACTINQ8WUQ7 758 aaKnown RBP24.36■■□□□ 1.49
PTP4A1-203ENST00000473334 ZNF560Q96MR9 790 aa24.36■■□□□ 1.49
PTP4A1-203ENST00000473334 SCAND2PQ9GZW5 306 aaPredicted RBP24.36■■□□□ 1.49
PTP4A1-203ENST00000473334 USP25Q9UHP3 1055 aa24.36■■□□□ 1.49
PTP4A1-203ENST00000473334 DSEQ9UL01 958 aa24.36■■□□□ 1.49
PTP4A1-203ENST00000473334 CDH7Q9ULB5 785 aa24.36■■□□□ 1.49
PTP4A1-203ENST00000473334 HPSEQ9Y251 543 aa24.36■■□□□ 1.49
PTP4A1-203ENST00000473334 ZNF318Q5VUA4 2279 aa24.36■■□□□ 1.49
PTP4A1-203ENST00000473334 MYBPC2Q14324 1141 aa24.35■■□□□ 1.49
PTP4A1-203ENST00000473334 SV2CQ496J9 727 aa24.35■■□□□ 1.49
PTP4A1-203ENST00000473334 ITFG1Q8TB96 612 aa24.35■■□□□ 1.49
PTP4A1-203ENST00000473334 SCFD1Q8WVM8 642 aa24.35■■□□□ 1.49
PTP4A1-203ENST00000473334 RSAD2Q8WXG1 361 aa24.35■■□□□ 1.49
PTP4A1-203ENST00000473334 HSPBP1Q9NZL4 362 aa24.35■■□□□ 1.49
PTP4A1-203ENST00000473334 KMT2EQ8IZD2 1858 aa24.34■■□□□ 1.49
PTP4A1-203ENST00000473334 CYB561D2O14569 222 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms