RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 PARP2Q9UGN5 583 aa9.98□□□□□ -0.81
SMC4-213ENST00000472282 KCNG1Q9UIX4 513 aa9.98□□□□□ -0.81
SMC4-213ENST00000472282 GIT1Q9Y2X7 761 aa9.98□□□□□ -0.81
SMC4-213ENST00000472282 NOTCH4Q99466 2003 aa9.98□□□□□ -0.81
SMC4-213ENST00000472282 TMEM221A6NGB7 291 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 GOLGA6L22H0YM25 854 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 M0R296 226 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 PTGESO14684 152 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 N4BP3O15049 544 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 KLRC4O43908 158 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 GCNT3O95395 438 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 PDGFBP01127 241 aaPredicted RBP9.97□□□□□ -0.81
SMC4-213ENST00000472282 MYL1P05976 194 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 CASP5P51878 434 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 GTF2BQ00403 316 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 ITIH3Q06033 890 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 NCBP1Q09161 790 aaKnown RBP9.97□□□□□ -0.81
SMC4-213ENST00000472282 DPYDQ12882 1025 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 PNOCQ13519 176 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 NAB2Q15742 525 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 ZC2HC1CQ53FD0 456 aaPredicted RBP9.97□□□□□ -0.81
SMC4-213ENST00000472282 FAM26FQ5R3K3 315 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 ATF7IP2Q5U623 682 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 KIAA0319Q5VV43 1072 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 KIAA1841Q6NSI8 718 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 ZNF720Q7Z2F6 126 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 GLIS3Q8NEA6 775 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 ASIC4Q96FT7 647 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 BICD1Q96G01 975 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 CCDC34Q96HJ3 373 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 FBXL18Q96ME1 805 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 TIGD1Q96MW7 591 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 TARS2Q9BW92 718 aaKnown RBP9.97□□□□□ -0.81
SMC4-213ENST00000472282 MRPL4Q9BYD3 311 aaKnown RBP9.97□□□□□ -0.81
SMC4-213ENST00000472282 UBN1Q9NPG3 1134 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 LMBRD1Q9NUN5 540 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 EXOC1Q9NV70 894 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 SNTG2Q9NY99 539 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 TBX20Q9UMR3 447 aa9.97□□□□□ -0.81
SMC4-213ENST00000472282 PVALEFA0A1B0GWK0 134 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 CASTOR2A6NHX0 329 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 HNRNPDLO14979 420 aaKnown RBP9.96□□□□□ -0.82
SMC4-213ENST00000472282 TEX28O15482 410 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 MAN1A2O60476 641 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 RECQL4O94761 1208 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 PRPF6O94906 941 aaKnown RBP9.96□□□□□ -0.82
SMC4-213ENST00000472282 URODP06132 367 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 ASGR2P07307 311 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 SPATA31D3P0C874 917 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 RPL17P18621 184 aaKnown RBP9.96□□□□□ -0.82
SMC4-213ENST00000472282 KLRC2P26717 231 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 MTHFRP42898 656 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 GLUD2P49448 558 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 EHHADHQ08426 723 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 GRIK3Q13003 919 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 BMS1Q14692 1282 aaKnown RBP9.96□□□□□ -0.82
SMC4-213ENST00000472282 PTPN21Q16825 1174 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 ZNF568Q3ZCX4 644 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 CES5AQ6NT32 575 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 FUT10Q6P4F1 479 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 SPATA31D4Q6ZUB0 917 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 MAP4K3Q8IVH8 894 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 GLYCTKQ8IVS8 523 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 HASPINQ8TF76 798 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 ERCC4Q92889 916 aaPredicted RBP9.96□□□□□ -0.82
SMC4-213ENST00000472282 KCNN1Q92952 543 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 HVCN1Q96D96 273 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 RPS6KC1Q96S38 1066 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 ACO2Q99798 780 aaKnown RBP9.96□□□□□ -0.82
SMC4-213ENST00000472282 ADPGKQ9BRR6 497 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 ST6GALNAC4Q9H4F1 302 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 SLC39A2Q9NP94 309 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 MRPL17Q9NRX2 175 aaKnown RBP9.96□□□□□ -0.82
SMC4-213ENST00000472282 CHST7Q9NS84 486 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 DZANK1Q9NVP4 752 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 ANKFY1Q9P2R3 1169 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 TNFSF13BQ9Y275 285 aa9.96□□□□□ -0.82
SMC4-213ENST00000472282 CARNS1A5YM72 827 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 ABLIM1O14639 778 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 PIGRP01833 764 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 RPN1P04843 607 aaKnown RBP9.95□□□□□ -0.82
SMC4-213ENST00000472282 HARSP12081 509 aaKnown RBP9.95□□□□□ -0.82
SMC4-213ENST00000472282 SCP2P22307 547 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 ABCD1P33897 745 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 LIG4P49917 911 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 VCPP55072 806 aaKnown RBP9.95□□□□□ -0.82
SMC4-213ENST00000472282 DSG1Q02413 1049 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 SIGLEC14Q08ET2 396 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 KCNA1Q09470 495 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 ALCAMQ13740 583 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 DCAF4L1Q3SXM0 396 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 GLRA4Q5JXX5 417 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 RTP2Q5QGT7 225 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 ATAT1Q5SQI0 421 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 L1TD1Q5T7N2 865 aaKnown RBP9.95□□□□□ -0.82
SMC4-213ENST00000472282 PRSS55Q6UWB4 352 aaPredicted RBP9.95□□□□□ -0.82
SMC4-213ENST00000472282 ZPBP2Q6X784 338 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 STXBP4Q6ZWJ1 553 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 BMP8AQ7Z5Y6 402 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 GPR149Q86SP6 731 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms