RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 PCDHGA10Q9Y5H3 936 aa16.34■□□□□ 0.21
CALD1-215ENST00000472096 IL18RAPO95256 599 aa16.33■□□□□ 0.2
CALD1-215ENST00000472096 LDHAP00338 332 aaKnown RBP16.33■□□□□ 0.2
CALD1-215ENST00000472096 SPATA31D3P0C874 917 aa16.33■□□□□ 0.2
CALD1-215ENST00000472096 AARSP49588 968 aaKnown RBP eCLIP16.33■□□□□ 0.2
CALD1-215ENST00000472096 VARS2Q5ST30 1063 aaKnown RBP16.33■□□□□ 0.2
CALD1-215ENST00000472096 SPATA31D4Q6ZUB0 917 aa16.33■□□□□ 0.2
CALD1-215ENST00000472096 GPR149Q86SP6 731 aa16.33■□□□□ 0.2
CALD1-215ENST00000472096 EFCAB13Q8IY85 973 aa16.33■□□□□ 0.2
CALD1-215ENST00000472096 ZNF507Q8TCN5 953 aa16.33■□□□□ 0.2
CALD1-215ENST00000472096 HDAC7Q8WUI4 952 aa16.33■□□□□ 0.2
CALD1-215ENST00000472096 SCFD1Q8WVM8 642 aa16.33■□□□□ 0.2
CALD1-215ENST00000472096 PLEKHA4Q9H4M7 779 aa16.33■□□□□ 0.2
CALD1-215ENST00000472096 BACE2Q9Y5Z0 518 aa16.33■□□□□ 0.2
CALD1-215ENST00000472096 MYO10Q9HD67 2058 aa16.33■□□□□ 0.2
CALD1-215ENST00000472096 GOLGA8IPA6NC78 632 aa16.32■□□□□ 0.2
CALD1-215ENST00000472096 GOLGA8JA6NMD2 632 aa16.32■□□□□ 0.2
CALD1-215ENST00000472096 M0QZQ0 153 aa16.32■□□□□ 0.2
CALD1-215ENST00000472096 PPEF2O14830 753 aa16.32■□□□□ 0.2
CALD1-215ENST00000472096 KIAA0391O15091 583 aaKnown RBP16.32■□□□□ 0.2
CALD1-215ENST00000472096 EXTL3O43909 919 aa16.32■□□□□ 0.2
CALD1-215ENST00000472096 RFPL2O75678 378 aa16.32■□□□□ 0.2
CALD1-215ENST00000472096 PAPLNO95428 1278 aa16.32■□□□□ 0.2
CALD1-215ENST00000472096 MYL1P05976 194 aa16.32■□□□□ 0.2
CALD1-215ENST00000472096 WNT7BP56706 349 aa16.32■□□□□ 0.2
CALD1-215ENST00000472096 BMT2Q1RMZ1 405 aa16.32■□□□□ 0.2
CALD1-215ENST00000472096 RSPO2Q6UXX9 243 aaPredicted RBP16.32■□□□□ 0.2
CALD1-215ENST00000472096 C15orf39Q6ZRI6 1047 aa16.32■□□□□ 0.2
CALD1-215ENST00000472096 GPD1LQ8N335 351 aa16.32■□□□□ 0.2
CALD1-215ENST00000472096 KREMEN2Q8NCW0 462 aa16.32■□□□□ 0.2
CALD1-215ENST00000472096 RPGRIP1Q96KN7 1286 aa16.32■□□□□ 0.2
CALD1-215ENST00000472096 PCIF1Q9H4Z3 704 aa16.32■□□□□ 0.2
CALD1-215ENST00000472096 SLC39A2Q9NP94 309 aa16.32■□□□□ 0.2
CALD1-215ENST00000472096 EXOC1Q9NV70 894 aa16.32■□□□□ 0.2
CALD1-215ENST00000472096 RBAKQ9NYW8 714 aaPredicted RBP16.32■□□□□ 0.2
CALD1-215ENST00000472096 CDY1Q9Y6F8 540 aa16.32■□□□□ 0.2
CALD1-215ENST00000472096 NOTCH4Q99466 2003 aa16.31■□□□□ 0.2
CALD1-215ENST00000472096 ZMYND10O75800 440 aa16.31■□□□□ 0.2
CALD1-215ENST00000472096 OR1D2P34982 312 aa16.31■□□□□ 0.2
CALD1-215ENST00000472096 RAB33AQ14088 237 aa16.31■□□□□ 0.2
CALD1-215ENST00000472096 KMT5BQ4FZB7 885 aa16.31■□□□□ 0.2
CALD1-215ENST00000472096 ATAT1Q5SQI0 421 aa16.31■□□□□ 0.2
CALD1-215ENST00000472096 C9orf57Q5W0N0 161 aa16.31■□□□□ 0.2
CALD1-215ENST00000472096 KRBA2Q6ZNG9 492 aa16.31■□□□□ 0.2
CALD1-215ENST00000472096 NT5DC4Q86YG4 428 aa16.31■□□□□ 0.2
CALD1-215ENST00000472096 NELFCDQ8IXH7 590 aa16.31■□□□□ 0.2
CALD1-215ENST00000472096 KIAA0895Q8NCT3 520 aa16.31■□□□□ 0.2
CALD1-215ENST00000472096 NOC3LQ8WTT2 800 aaKnown RBP16.31■□□□□ 0.2
CALD1-215ENST00000472096 EPAS1Q99814 870 aa16.31■□□□□ 0.2
CALD1-215ENST00000472096 RHOBTB2Q9BYZ6 727 aa16.31■□□□□ 0.2
CALD1-215ENST00000472096 ZDHHC7Q9NXF8 308 aa16.31■□□□□ 0.2
CALD1-215ENST00000472096 HSPBP1Q9NZL4 362 aa16.31■□□□□ 0.2
CALD1-215ENST00000472096 CCDC195A0A1B0GUA6 201 aa16.3■□□□□ 0.2
CALD1-215ENST00000472096 ANO9A1A5B4 782 aa16.3■□□□□ 0.2
CALD1-215ENST00000472096 H7C4K7 107 aa16.3■□□□□ 0.2
CALD1-215ENST00000472096 PIRO00625 290 aa16.3■□□□□ 0.2
CALD1-215ENST00000472096 TGFB1I1O43294 461 aa16.3■□□□□ 0.2
CALD1-215ENST00000472096 TBC1D4O60343 1298 aa16.3■□□□□ 0.2
CALD1-215ENST00000472096 SP100P23497 879 aaPredicted RBP16.3■□□□□ 0.2
CALD1-215ENST00000472096 ROR1Q01973 937 aa16.3■□□□□ 0.2
CALD1-215ENST00000472096 MRPL58Q14197 206 aaKnown RBP16.3■□□□□ 0.2
CALD1-215ENST00000472096 SLC8B1Q6J4K2 584 aa16.3■□□□□ 0.2
CALD1-215ENST00000472096 ZNF280DQ6N043 979 aa16.3■□□□□ 0.2
CALD1-215ENST00000472096 RNF135Q8IUD6 432 aa16.3■□□□□ 0.2
CALD1-215ENST00000472096 APPL2Q8NEU8 664 aa16.3■□□□□ 0.2
CALD1-215ENST00000472096 ZNF707Q96C28 371 aaPredicted RBP16.3■□□□□ 0.2
CALD1-215ENST00000472096 AGPAT3Q9NRZ7 376 aa16.3■□□□□ 0.2
CALD1-215ENST00000472096 DPP3Q9NY33 737 aa16.3■□□□□ 0.2
CALD1-215ENST00000472096 NR2E1Q9Y466 385 aa16.3■□□□□ 0.2
CALD1-215ENST00000472096 ZNF202O95125 648 aa16.29■□□□□ 0.2
CALD1-215ENST00000472096 C8AP07357 584 aa16.29■□□□□ 0.2
CALD1-215ENST00000472096 LILRA4P59901 499 aa16.29■□□□□ 0.2
CALD1-215ENST00000472096 SNRPFP62306 86 aaKnown RBP16.29■□□□□ 0.2
CALD1-215ENST00000472096 DPYDQ12882 1025 aa16.29■□□□□ 0.2
CALD1-215ENST00000472096 STK4Q13043 487 aa16.29■□□□□ 0.2
CALD1-215ENST00000472096 CTXN3Q4LDR2 81 aa16.29■□□□□ 0.2
CALD1-215ENST00000472096 LIN9Q5TKA1 542 aa16.29■□□□□ 0.2
CALD1-215ENST00000472096 CYP26C1Q6V0L0 522 aa16.29■□□□□ 0.2
CALD1-215ENST00000472096 CCDC149Q6ZUS6 474 aa16.29■□□□□ 0.2
CALD1-215ENST00000472096 HS2ST1Q7LGA3 356 aa16.29■□□□□ 0.2
CALD1-215ENST00000472096 CBWD2Q8IUF1 395 aa16.29■□□□□ 0.2
CALD1-215ENST00000472096 SMG7Q92540 1137 aaKnown RBP16.29■□□□□ 0.2
CALD1-215ENST00000472096 EPHX3Q9H6B9 360 aa16.29■□□□□ 0.2
CALD1-215ENST00000472096 PDE11AQ9HCR9 933 aa16.29■□□□□ 0.2
CALD1-215ENST00000472096 FBXL5Q9UKA1 691 aa16.29■□□□□ 0.2
CALD1-215ENST00000472096 WDR27A2RRH5 827 aa16.28■□□□□ 0.2
CALD1-215ENST00000472096 C2CD4DB7Z1M9 353 aa16.28■□□□□ 0.2
CALD1-215ENST00000472096 PI4K2BG5E9Z4 385 aa16.28■□□□□ 0.2
CALD1-215ENST00000472096 CLIC2O15247 247 aa16.28■□□□□ 0.2
CALD1-215ENST00000472096 SPTLC1O15269 473 aa16.28■□□□□ 0.2
CALD1-215ENST00000472096 DCXO43602 365 aa16.28■□□□□ 0.2
CALD1-215ENST00000472096 RPN1P04843 607 aaKnown RBP16.28■□□□□ 0.2
CALD1-215ENST00000472096 TYMPP19971 482 aa16.28■□□□□ 0.2
CALD1-215ENST00000472096 PAX3P23760 479 aa16.28■□□□□ 0.2
CALD1-215ENST00000472096 TFAMQ00059 246 aaKnown RBP16.28■□□□□ 0.2
CALD1-215ENST00000472096 YWHAHQ04917 246 aaPredicted RBP16.28■□□□□ 0.2
CALD1-215ENST00000472096 PSMD2Q13200 908 aa16.28■□□□□ 0.2
CALD1-215ENST00000472096 KNOP1Q1ED39 458 aaKnown RBP16.28■□□□□ 0.2
CALD1-215ENST00000472096 DSTYKQ6XUX3 929 aa16.28■□□□□ 0.2
CALD1-215ENST00000472096 C12orf56Q8IXR9 622 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms