RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 GRM3Q14832 879 aa5.86□□□□□ -1.47
CDHR3-208ENST00000471910 LSM12Q3MHD2 195 aaKnown RBP5.86□□□□□ -1.47
CDHR3-208ENST00000471910 TIGD2Q4W5G0 525 aa5.86□□□□□ -1.47
CDHR3-208ENST00000471910 MIIPQ5JXC2 388 aa5.86□□□□□ -1.47
CDHR3-208ENST00000471910 DARS2Q6PI48 645 aaKnown RBP5.86□□□□□ -1.47
CDHR3-208ENST00000471910 MAEAQ7L5Y9 396 aa5.86□□□□□ -1.47
CDHR3-208ENST00000471910 CHST15Q7LFX5 561 aaPredicted RBP5.86□□□□□ -1.47
CDHR3-208ENST00000471910 PPP1R3BQ86XI6 285 aa5.86□□□□□ -1.47
CDHR3-208ENST00000471910 KIAA0319LQ8IZA0 1049 aa5.86□□□□□ -1.47
CDHR3-208ENST00000471910 PLBD2Q8NHP8 589 aa5.86□□□□□ -1.47
CDHR3-208ENST00000471910 HAS1Q92839 578 aa5.86□□□□□ -1.47
CDHR3-208ENST00000471910 ZNF503Q96F45 646 aa5.86□□□□□ -1.47
CDHR3-208ENST00000471910 SMOQ99835 787 aa5.86□□□□□ -1.47
CDHR3-208ENST00000471910 RSAD1Q9HA92 442 aa5.86□□□□□ -1.47
CDHR3-208ENST00000471910 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.86□□□□□ -1.47
CDHR3-208ENST00000471910 STAP2Q9UGK3 403 aa5.86□□□□□ -1.47
CDHR3-208ENST00000471910 DDX20Q9UHI6 824 aaKnown RBP5.86□□□□□ -1.47
CDHR3-208ENST00000471910 SLC45A2Q9UMX9 530 aa5.86□□□□□ -1.47
CDHR3-208ENST00000471910 REXO2Q9Y3B8 237 aaKnown RBP5.86□□□□□ -1.47
CDHR3-208ENST00000471910 NEU2Q9Y3R4 380 aa5.86□□□□□ -1.47
CDHR3-208ENST00000471910 CFAP69A5D8W1 941 aa5.85□□□□□ -1.47
CDHR3-208ENST00000471910 ZNF785A8K8V0 405 aa5.85□□□□□ -1.47
CDHR3-208ENST00000471910 CAND2O75155 1236 aa5.85□□□□□ -1.47
CDHR3-208ENST00000471910 NCR1O76036 304 aa5.85□□□□□ -1.47
CDHR3-208ENST00000471910 NDUFA10O95299 355 aa5.85□□□□□ -1.47
CDHR3-208ENST00000471910 MATN4O95460 622 aa5.85□□□□□ -1.47
CDHR3-208ENST00000471910 ZBED1O96006 694 aa5.85□□□□□ -1.47
CDHR3-208ENST00000471910 AHSGP02765 367 aa5.85□□□□□ -1.47
CDHR3-208ENST00000471910 FGFR4P22455 802 aa5.85□□□□□ -1.47
CDHR3-208ENST00000471910 PHKA1P46020 1223 aa5.85□□□□□ -1.47
CDHR3-208ENST00000471910 PTTG1IPP53801 180 aa5.85□□□□□ -1.47
CDHR3-208ENST00000471910 SOX8P57073 446 aa5.85□□□□□ -1.47
CDHR3-208ENST00000471910 FAM193AP78312 1265 aa5.85□□□□□ -1.47
CDHR3-208ENST00000471910 SLC25A3Q00325 362 aa5.85□□□□□ -1.47
CDHR3-208ENST00000471910 HABP2Q14520 560 aaPredicted RBP5.85□□□□□ -1.47
CDHR3-208ENST00000471910 EMC10Q5UCC4 262 aa5.85□□□□□ -1.47
CDHR3-208ENST00000471910 TMEM132CQ8N3T6 1108 aa5.85□□□□□ -1.47
CDHR3-208ENST00000471910 CACTINQ8WUQ7 758 aaKnown RBP5.85□□□□□ -1.47
CDHR3-208ENST00000471910 KLHL32Q96NJ5 620 aa5.85□□□□□ -1.47
CDHR3-208ENST00000471910 NEU1Q99519 415 aa5.85□□□□□ -1.47
CDHR3-208ENST00000471910 VPS11Q9H270 941 aa5.85□□□□□ -1.47
CDHR3-208ENST00000471910 ZNF768Q9H5H4 540 aaKnown RBP5.85□□□□□ -1.47
CDHR3-208ENST00000471910 NRDE2Q9H7Z3 1164 aa5.85□□□□□ -1.47
CDHR3-208ENST00000471910 GPR35Q9HC97 309 aa5.85□□□□□ -1.47
CDHR3-208ENST00000471910 L1RE1Q9UN81 338 aa5.85□□□□□ -1.47
CDHR3-208ENST00000471910 FZD1Q9UP38 647 aa5.85□□□□□ -1.47
CDHR3-208ENST00000471910 CDYLQ9Y232 598 aa5.85□□□□□ -1.47
CDHR3-208ENST00000471910 PRC1O43663 620 aa5.84□□□□□ -1.47
CDHR3-208ENST00000471910 MGEA5O60502 916 aa5.84□□□□□ -1.47
CDHR3-208ENST00000471910 HRGP04196 525 aa5.84□□□□□ -1.47
CDHR3-208ENST00000471910 CFIP05156 583 aa5.84□□□□□ -1.47
CDHR3-208ENST00000471910 FCER1AP12319 257 aa5.84□□□□□ -1.47
CDHR3-208ENST00000471910 BMPR1AP36894 532 aa5.84□□□□□ -1.47
CDHR3-208ENST00000471910 ZNF135P52742 658 aaPredicted RBP5.84□□□□□ -1.47
CDHR3-208ENST00000471910 HSD11B2P80365 405 aa5.84□□□□□ -1.47
CDHR3-208ENST00000471910 EXOSC9Q06265 439 aaKnown RBP5.84□□□□□ -1.47
CDHR3-208ENST00000471910 SLFN5Q08AF3 891 aa5.84□□□□□ -1.47
CDHR3-208ENST00000471910 CNN3Q15417 329 aaKnown RBP5.84□□□□□ -1.47
CDHR3-208ENST00000471910 KIAA0753Q2KHM9 967 aa5.84□□□□□ -1.47
CDHR3-208ENST00000471910 AMOTQ4VCS5 1084 aa5.84□□□□□ -1.47
CDHR3-208ENST00000471910 RNF220Q5VTB9 566 aa5.84□□□□□ -1.47
CDHR3-208ENST00000471910 DBX2Q6ZNG2 339 aa5.84□□□□□ -1.47
CDHR3-208ENST00000471910 CCAR1Q8IX12 1150 aaKnown RBP5.84□□□□□ -1.47
CDHR3-208ENST00000471910 FAM156AQ8NDB6 213 aa5.84□□□□□ -1.47
CDHR3-208ENST00000471910 TMIEQ8NEW7 156 aa5.84□□□□□ -1.47
CDHR3-208ENST00000471910 MYEOVQ96EZ4 313 aa5.84□□□□□ -1.47
CDHR3-208ENST00000471910 ZSWIM1Q9BR11 485 aa5.84□□□□□ -1.47
CDHR3-208ENST00000471910 CNPPD1Q9BV87 410 aa5.84□□□□□ -1.47
CDHR3-208ENST00000471910 TEX101Q9BY14 249 aa5.84□□□□□ -1.47
CDHR3-208ENST00000471910 TPCN1Q9ULQ1 816 aa5.84□□□□□ -1.47
CDHR3-208ENST00000471910 AATKQ6ZMQ8 1374 aa5.83□□□□□ -1.48
CDHR3-208ENST00000471910 GOLIM4O00461 696 aa5.83□□□□□ -1.48
CDHR3-208ENST00000471910 TPP1O14773 563 aa5.83□□□□□ -1.48
CDHR3-208ENST00000471910 HDCP19113 662 aa5.83□□□□□ -1.48
CDHR3-208ENST00000471910 POU6F2P78424 691 aaPredicted RBP5.83□□□□□ -1.48
CDHR3-208ENST00000471910 FAM189BP81408 668 aa5.83□□□□□ -1.48
CDHR3-208ENST00000471910 DGCR2P98153 550 aa5.83□□□□□ -1.48
CDHR3-208ENST00000471910 OCA2Q04671 838 aa5.83□□□□□ -1.48
CDHR3-208ENST00000471910 RESTQ13127 1097 aa5.83□□□□□ -1.48
CDHR3-208ENST00000471910 PUM1Q14671 1186 aaKnown RBP eCLIP5.83□□□□□ -1.48
CDHR3-208ENST00000471910 BEAN1Q3B7T3 259 aa5.83□□□□□ -1.48
CDHR3-208ENST00000471910 USP37Q86T82 979 aa5.83□□□□□ -1.48
CDHR3-208ENST00000471910 CFAP52Q8N1V2 620 aa5.83□□□□□ -1.48
CDHR3-208ENST00000471910 PDPRQ8NCN5 879 aa5.83□□□□□ -1.48
CDHR3-208ENST00000471910 CPEB3Q8NE35 698 aaKnown RBP5.83□□□□□ -1.48
CDHR3-208ENST00000471910 ZNF483Q8TF39 744 aaPredicted RBP5.83□□□□□ -1.48
CDHR3-208ENST00000471910 LENG9Q96B70 501 aa5.83□□□□□ -1.48
CDHR3-208ENST00000471910 RNF31Q96EP0 1072 aa5.83□□□□□ -1.48
CDHR3-208ENST00000471910 SUCLG2Q96I99 432 aa5.83□□□□□ -1.48
CDHR3-208ENST00000471910 BOD1Q96IK1 185 aa5.83□□□□□ -1.48
CDHR3-208ENST00000471910 TLR10Q9BXR5 811 aa5.83□□□□□ -1.48
CDHR3-208ENST00000471910 ALOXE3Q9BYJ1 711 aa5.83□□□□□ -1.48
CDHR3-208ENST00000471910 ZMAT3Q9HA38 289 aaKnown RBP5.83□□□□□ -1.48
CDHR3-208ENST00000471910 USP25Q9UHP3 1055 aa5.83□□□□□ -1.48
CDHR3-208ENST00000471910 KCNE5Q9UJ90 142 aa5.83□□□□□ -1.48
CDHR3-208ENST00000471910 MAP3K2Q9Y2U5 619 aa5.83□□□□□ -1.48
CDHR3-208ENST00000471910 CCDC195A0A1B0GUA6 201 aa5.82□□□□□ -1.48
CDHR3-208ENST00000471910 PRSS29PA6NIE9 313 aa5.82□□□□□ -1.48
CDHR3-208ENST00000471910 POLRMTO00411 1230 aaKnown RBP5.82□□□□□ -1.48
CDHR3-208ENST00000471910 FOSP01100 380 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms