RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 WDR72Q3MJ13 1102 aa9.33□□□□□ -0.92
HDLBP-233ENST00000470710 TDRD12Q587J7 1177 aaKnown RBP9.33□□□□□ -0.92
HDLBP-233ENST00000470710 NOMO2Q5JPE7 1267 aa9.33□□□□□ -0.92
HDLBP-233ENST00000470710 CLLU1OSQ5K130 101 aa9.33□□□□□ -0.92
HDLBP-233ENST00000470710 MFSD5Q6N075 450 aa9.33□□□□□ -0.92
HDLBP-233ENST00000470710 ZNF571Q7Z3V5 609 aaPredicted RBP9.33□□□□□ -0.92
HDLBP-233ENST00000470710 NPAS4Q8IUM7 802 aa9.33□□□□□ -0.92
HDLBP-233ENST00000470710 CRIPAKQ8N1N5 446 aa9.33□□□□□ -0.92
HDLBP-233ENST00000470710 TMEM130Q8N3G9 435 aa9.33□□□□□ -0.92
HDLBP-233ENST00000470710 TTC39CQ8N584 583 aa9.33□□□□□ -0.92
HDLBP-233ENST00000470710 ELMO3Q96BJ8 720 aa9.33□□□□□ -0.92
HDLBP-233ENST00000470710 DDX27Q96GQ7 796 aaKnown RBP9.33□□□□□ -0.92
HDLBP-233ENST00000470710 CCDC42Q96M95 316 aa9.33□□□□□ -0.92
HDLBP-233ENST00000470710 UROC1Q96N76 676 aa9.33□□□□□ -0.92
HDLBP-233ENST00000470710 SYT11Q9BT88 431 aa9.33□□□□□ -0.92
HDLBP-233ENST00000470710 HAUS4Q9H6D7 363 aa9.33□□□□□ -0.92
HDLBP-233ENST00000470710 RNF19AQ9NV58 838 aa9.33□□□□□ -0.92
HDLBP-233ENST00000470710 MIOSQ9NXC5 875 aa9.33□□□□□ -0.92
HDLBP-233ENST00000470710 GDAP2Q9NXN4 497 aa9.33□□□□□ -0.92
HDLBP-233ENST00000470710 KANSL3Q9P2N6 904 aa9.33□□□□□ -0.92
HDLBP-233ENST00000470710 PCDHB7Q9Y5E2 793 aa9.33□□□□□ -0.92
HDLBP-233ENST00000470710 EPN1Q9Y6I3 576 aaPredicted RBP9.33□□□□□ -0.92
HDLBP-233ENST00000470710 ANK1P16157 1881 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 ABHD14A-ACY1A0A1B0GW23 586 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.32□□□□□ -0.92
HDLBP-233ENST00000470710 ESPNB1AK53 854 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 EIF3CLB5ME19 914 aaKnown RBP9.32□□□□□ -0.92
HDLBP-233ENST00000470710 PPEF2O14830 753 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 CYP26A1O43174 497 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 CCP110O43303 1012 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 EFCAB14O75071 495 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 CLSTN1O94985 981 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 FAM163BP0C2L3 166 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 KRT5P13647 590 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 RAG1P15918 1043 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 ITGB8P26012 769 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 MSNP26038 577 aaKnown RBP9.32□□□□□ -0.92
HDLBP-233ENST00000470710 CLCN1P35523 988 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 USP8P40818 1118 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 TAF6P49848 677 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 AFF1P51825 1210 aaKnown RBP9.32□□□□□ -0.92
HDLBP-233ENST00000470710 KIF11P52732 1056 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 TNNC1P63316 161 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 PTK2Q05397 1052 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 INCA1Q0VD86 236 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 TUSC3Q13454 348 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 IKBKEQ14164 716 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 MTF1Q14872 753 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 SV2CQ496J9 727 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 TOGARAM2Q6ZUX3 1019 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 LIMS2Q7Z4I7 341 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 DEFB128Q7Z7B8 93 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 VPS36Q86VN1 386 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 RPUSD2Q8IZ73 545 aaKnown RBP9.32□□□□□ -0.92
HDLBP-233ENST00000470710 TMEM199Q8N511 208 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 URGCPQ8TCY9 931 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 EIF3CQ99613 913 aaKnown RBP9.32□□□□□ -0.92
HDLBP-233ENST00000470710 DEF6Q9H4E7 631 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 PRDM5Q9NQX1 630 aaPredicted RBP9.32□□□□□ -0.92
HDLBP-233ENST00000470710 CISHQ9NSE2 258 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 NXF1Q9UBU9 619 aaKnown RBP9.32□□□□□ -0.92
HDLBP-233ENST00000470710 NOCTQ9UK39 431 aaKnown RBP9.32□□□□□ -0.92
HDLBP-233ENST00000470710 LRFN2Q9ULH4 789 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 POLIQ9UNA4 740 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 PCDHB4Q9Y5E5 795 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 ADGRG1Q9Y653 693 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 CITO14578 2027 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 TANC1Q9C0D5 1861 aa9.32□□□□□ -0.92
HDLBP-233ENST00000470710 KPNA7A9QM74 516 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 PODXLO00592 558 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 ZSCAN12O43309 604 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 AKR1B10O60218 316 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 CILPO75339 1184 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 TACC1O75410 805 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 IPO7O95373 1038 aaKnown RBP9.31□□□□□ -0.92
HDLBP-233ENST00000470710 POMCP01189 267 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 WEE2P0C1S8 567 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 CCDC175P0C221 793 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 FGFR1P11362 822 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 CYP11B1P15538 503 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 AARSP49588 968 aaKnown RBP eCLIP9.31□□□□□ -0.92
HDLBP-233ENST00000470710 PDE6CP51160 858 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 LILRA4P59901 499 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 KRT83P78385 493 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 DSC1Q08554 894 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 BMS1Q14692 1282 aaKnown RBP9.31□□□□□ -0.92
HDLBP-233ENST00000470710 SPA17Q15506 151 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 SLC18A3Q16572 532 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 UPP1Q16831 310 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 TMEM270Q6UE05 265 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 SCARA5Q6ZMJ2 495 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 SLC47A2Q86VL8 602 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 ZNF677Q86XU0 584 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 GPIHBP1Q8IV16 184 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 ABI1Q8IZP0 508 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 CCAR2Q8N163 923 aaKnown RBP9.31□□□□□ -0.92
HDLBP-233ENST00000470710 RBBP8NLQ8NC74 664 aaPredicted RBP9.31□□□□□ -0.92
HDLBP-233ENST00000470710 SLC30A5Q8TAD4 765 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 OLIG1Q8TAK6 271 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 EPS8L1Q8TE68 723 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms