RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 PCGF6Q9BYE7 350 aa3.43□□□□□ -1.86
UBXN4-206ENST00000470687 CPEB1Q9BZB8 566 aaKnown RBP3.43□□□□□ -1.86
UBXN4-206ENST00000470687 SAE1Q9UBE0 346 aaPredicted RBP3.43□□□□□ -1.86
UBXN4-206ENST00000470687 IP6K2Q9UHH9 426 aa3.43□□□□□ -1.86
UBXN4-206ENST00000470687 PCDHA13Q9Y5I0 950 aa3.43□□□□□ -1.86
UBXN4-206ENST00000470687 RBM8AQ9Y5S9 174 aaKnown RBP3.43□□□□□ -1.86
UBXN4-206ENST00000470687 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.43□□□□□ -1.86
UBXN4-206ENST00000470687 PTCH1Q13635 1447 aa3.43□□□□□ -1.86
UBXN4-206ENST00000470687 ADGRL3Q9HAR2 1447 aa3.43□□□□□ -1.86
UBXN4-206ENST00000470687 KIF1BO60333 1816 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 METP08581 1390 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 EIF3AQ14152 1382 aaKnown RBP3.42□□□□□ -1.86
UBXN4-206ENST00000470687 DHX57Q6P158 1386 aaKnown RBP3.42□□□□□ -1.86
UBXN4-206ENST00000470687 KLRG2A4D1S0 409 aaPredicted RBP3.42□□□□□ -1.86
UBXN4-206ENST00000470687 CCDC154A6NI56 674 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 RFPL1O75677 317 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 PRSS23O95084 383 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 ABHD16AO95870 558 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 ALDH2P05091 517 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 ZSCAN20P17040 1043 aaPredicted RBP3.42□□□□□ -1.86
UBXN4-206ENST00000470687 NR4A1P22736 598 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 HMGB2P26583 209 aaKnown RBP3.42□□□□□ -1.86
UBXN4-206ENST00000470687 CASRP41180 1078 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 RABGGTBP53611 331 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 MALLQ13021 153 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 TCIRG1Q13488 830 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 PTPAQ15257 358 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 ELAVL1Q15717 326 aaKnown RBP3.42□□□□□ -1.86
UBXN4-206ENST00000470687 ANO4Q32M45 955 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 FLYWCH1Q4VC44 716 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 C19orf54Q5BKX5 351 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 EPHA10Q5JZY3 1008 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 ATAT1Q5SQI0 421 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 LY6G5CQ5SRR4 150 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 PRAMEF14Q5SWL7 426 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 HECTD2Q5U5R9 776 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 TIGD7Q6NT04 549 aaPredicted RBP3.42□□□□□ -1.86
UBXN4-206ENST00000470687 KLHDC10Q6PID8 442 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 OLFML1Q6UWY5 402 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 LRRC55Q6ZSA7 311 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 GSPT2Q8IYD1 628 aaKnown RBP3.42□□□□□ -1.86
UBXN4-206ENST00000470687 SYNE4Q8N205 404 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 CELF5Q8N6W0 485 aaKnown RBP3.42□□□□□ -1.86
UBXN4-206ENST00000470687 ANKRD53Q8N9V6 530 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.42□□□□□ -1.86
UBXN4-206ENST00000470687 PPP1R35Q8TAP8 253 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 JPH3Q8WXH2 748 aaPredicted RBP3.42□□□□□ -1.86
UBXN4-206ENST00000470687 JDP2Q8WYK2 163 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 FERMT2Q96AC1 680 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 E2F7Q96AV8 911 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 RUNDC1Q96C34 613 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 CCDC136Q96JN2 1154 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 PDCD2LQ9BRP1 358 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 TOR3AQ9H497 397 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 LDAHQ9H6V9 325 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 C14orf93Q9H972 538 aaKnown RBP3.42□□□□□ -1.86
UBXN4-206ENST00000470687 FZD1Q9UP38 647 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 VWA7Q9Y334 891 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 LUC7L2Q9Y383 392 aaKnown RBP3.42□□□□□ -1.86
UBXN4-206ENST00000470687 HS3ST4Q9Y661 456 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 CCDC144AA2RUR9 1427 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 MST1RQ04912 1400 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 NAIPQ13075 1403 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 SHPRHQ149N8 1683 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 AFF2P51816 1311 aa3.42□□□□□ -1.86
UBXN4-206ENST00000470687 C1orf167Q5SNV9 1468 aa3.41□□□□□ -1.86
UBXN4-206ENST00000470687 COL16A1Q07092 1604 aaPredicted RBP3.41□□□□□ -1.86
UBXN4-206ENST00000470687 KLHL33A6NCF5 533 aa3.41□□□□□ -1.86
UBXN4-206ENST00000470687 NT5C1B-RDH14C9J2C7 533 aa3.41□□□□□ -1.86
UBXN4-206ENST00000470687 KIAA0355O15063 1070 aa3.41□□□□□ -1.86
UBXN4-206ENST00000470687 ALDH1A2O94788 518 aa3.41□□□□□ -1.86
UBXN4-206ENST00000470687 ITGB1P05556 798 aa3.41□□□□□ -1.86
UBXN4-206ENST00000470687 LTA4HP09960 611 aaKnown RBP3.41□□□□□ -1.86
UBXN4-206ENST00000470687 VSIG10L2P0DP72 767 aa3.41□□□□□ -1.86
UBXN4-206ENST00000470687 MYBP10242 640 aa3.41□□□□□ -1.86
UBXN4-206ENST00000470687 PF4V1P10720 104 aa3.41□□□□□ -1.86
UBXN4-206ENST00000470687 GSPT1P15170 499 aaKnown RBP3.41□□□□□ -1.86
UBXN4-206ENST00000470687 CPEP16870 476 aa3.41□□□□□ -1.86
UBXN4-206ENST00000470687 ADSLP30566 484 aaPredicted RBP3.41□□□□□ -1.86
UBXN4-206ENST00000470687 CLK3P49761 638 aaKnown RBP3.41□□□□□ -1.86
UBXN4-206ENST00000470687 MGAT2Q10469 447 aa3.41□□□□□ -1.86
UBXN4-206ENST00000470687 RRP12Q5JTH9 1297 aaKnown RBP3.41□□□□□ -1.86
UBXN4-206ENST00000470687 ZNF362Q5T0B9 420 aaPredicted RBP3.41□□□□□ -1.86
UBXN4-206ENST00000470687 LMBR1LQ6UX01 489 aa3.41□□□□□ -1.86
UBXN4-206ENST00000470687 HTR3DQ70Z44 454 aa3.41□□□□□ -1.86
UBXN4-206ENST00000470687 BEND2Q8NDZ0 799 aa3.41□□□□□ -1.86
UBXN4-206ENST00000470687 GPR156Q8NFN8 814 aa3.41□□□□□ -1.86
UBXN4-206ENST00000470687 TTC8Q8TAM2 541 aa3.41□□□□□ -1.86
UBXN4-206ENST00000470687 STON2Q8WXE9 905 aa3.41□□□□□ -1.86
UBXN4-206ENST00000470687 RAX2Q96IS3 184 aa3.41□□□□□ -1.86
UBXN4-206ENST00000470687 TAAR9Q96RI9 348 aa3.41□□□□□ -1.86
UBXN4-206ENST00000470687 SLC6A15Q9H2J7 730 aa3.41□□□□□ -1.86
UBXN4-206ENST00000470687 R3HDMLQ9H3Y0 253 aa3.41□□□□□ -1.86
UBXN4-206ENST00000470687 PRDM13Q9H4Q3 707 aa3.41□□□□□ -1.86
UBXN4-206ENST00000470687 GREM2Q9H772 168 aa3.41□□□□□ -1.86
UBXN4-206ENST00000470687 MRPS18AQ9NVS2 196 aaKnown RBP3.41□□□□□ -1.86
UBXN4-206ENST00000470687 MKS1Q9NXB0 559 aa3.41□□□□□ -1.86
UBXN4-206ENST00000470687 NOB1Q9ULX3 412 aaKnown RBP3.41□□□□□ -1.86
UBXN4-206ENST00000470687 DNM3Q9UQ16 869 aa3.41□□□□□ -1.86
UBXN4-206ENST00000470687 COX11Q9Y6N1 276 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms