RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 RHBDL2Q9NX52 303 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 MCM9Q9NXL9 1143 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 STK32BQ9NY57 414 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 ORC3Q9UBD5 711 aaPredicted RBP5.45□□□□□ -1.54
COL3A1-205ENST00000470167 CHMP2BQ9UQN3 213 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 RRP7AQ9Y3A4 280 aaKnown RBP5.45□□□□□ -1.54
COL3A1-205ENST00000470167 PCDHGB7Q9Y5F8 929 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 HEY1Q9Y5J3 304 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 SETD5Q9C0A6 1442 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 CPDO75976 1380 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 USP31Q70CQ4 1352 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 CYP3A7-CYP3A51PA0A087WV96 503 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 A0A1B0GVC2 190 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 MAGEB16A2A368 324 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 HEATR9A2RTY3 570 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 CCDC69A6NI79 296 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 C16orf96A6NNT2 1141 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 FAM155AB1AL88 458 aaPredicted RBP5.44□□□□□ -1.54
COL3A1-205ENST00000470167 H3BQF6 201 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 MYO1FO00160 1098 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 FYB1O15117 783 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 KCNQ2O43526 872 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 NDUFA2O43678 99 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 TIPRLO75663 272 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 FARP2O94887 1054 aaPredicted RBP5.44□□□□□ -1.54
COL3A1-205ENST00000470167 ADCY5O95622 1261 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 OXSR1O95747 527 aaPredicted RBP5.44□□□□□ -1.54
COL3A1-205ENST00000470167 MBD3O95983 291 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 HEXBP07686 556 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 ABCB1P08183 1280 aaPredicted RBP5.44□□□□□ -1.54
COL3A1-205ENST00000470167 POLR2MP0CAP2 368 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 RARBP10826 455 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 POLR2CP19387 275 aaPredicted RBP5.44□□□□□ -1.54
COL3A1-205ENST00000470167 CDH3P22223 829 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 CYP3A7P24462 503 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 ACAT1P24752 427 aaKnown RBP5.44□□□□□ -1.54
COL3A1-205ENST00000470167 GSTT1P30711 240 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 SOX18P35713 384 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 PPARGP37231 505 aaPredicted RBP5.44□□□□□ -1.54
COL3A1-205ENST00000470167 IFNAR2P48551 515 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 HSD17B4P51659 736 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 FCGRTP55899 365 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 NOP14P78316 857 aaKnown RBP5.44□□□□□ -1.54
COL3A1-205ENST00000470167 NKX3-2P78367 333 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 CTBSQ01459 385 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 KRT76Q01546 638 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 PLAURQ03405 335 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 CDC20Q12834 499 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 HYAL2Q12891 473 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 MXD4Q14582 209 aaPredicted RBP5.44□□□□□ -1.54
COL3A1-205ENST00000470167 RFTN1Q14699 578 aaPredicted RBP5.44□□□□□ -1.54
COL3A1-205ENST00000470167 CASP8Q14790 479 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 ALX1Q15699 326 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 MAPKAPK3Q16644 382 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 NFIL3Q16649 462 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 CWF19L2Q2TBE0 894 aaKnown RBP5.44□□□□□ -1.54
COL3A1-205ENST00000470167 MAJINQ3KP22 176 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 HSP90AA5PQ58FG0 334 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 HABP4Q5JVS0 413 aaKnown RBP5.44□□□□□ -1.54
COL3A1-205ENST00000470167 SPDYAQ5MJ70 313 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 SYDE2Q5VT97 1194 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 DAB2IPQ5VWQ8 1189 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 IQSEC1Q6DN90 963 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 TMEM132EQ6IEE7 984 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 FASTKD5Q7L8L6 764 aaKnown RBP5.44□□□□□ -1.54
COL3A1-205ENST00000470167 C17orf53Q8N3J3 647 aaPredicted RBP5.44□□□□□ -1.54
COL3A1-205ENST00000470167 NKAPQ8N5F7 415 aaKnown RBP5.44□□□□□ -1.54
COL3A1-205ENST00000470167 C3orf58Q8NDZ4 430 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 TTLQ8NG68 377 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 CEP70Q8NHQ1 597 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 HNRNPLLQ8WVV9 542 aaKnown RBP5.44□□□□□ -1.54
COL3A1-205ENST00000470167 TTC17Q96AE7 1141 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 HAPLN3Q96S86 360 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 TCF25Q9BQ70 676 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 ZKSCAN3Q9BRR0 538 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 ADPGKQ9BRR6 497 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 ZCWPW1Q9H0M4 648 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 KANSL2Q9H9L4 492 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 LIN7BQ9HAP6 207 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 FANCEQ9HB96 536 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 NEK6Q9HC98 313 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 SLC40A1Q9NP59 571 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 CNGB3Q9NQW8 809 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 ASNSD1Q9NWL6 643 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 SENP1Q9P0U3 644 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 TBC1D14Q9P2M4 693 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 TNFRSF10DQ9UBN6 386 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 CTNNAL1Q9UBT7 734 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 DBF4Q9UBU7 674 aaPredicted RBP5.44□□□□□ -1.54
COL3A1-205ENST00000470167 DNAJC16Q9Y2G8 782 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 TSC22D4Q9Y3Q8 395 aa5.44□□□□□ -1.54
COL3A1-205ENST00000470167 SBNO1A3KN83 1393 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 A0A0J9YVX5 310 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 GOLGA8QA0A0J9YX86 632 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 FAM237AA0A1B0GTK4 181 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 PTPDC1A2A3K4 754 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 SH3D21A4FU49 640 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 ANKRD34BA5PLL1 514 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 GOLGA8OA6NCC3 632 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 ACOD1A6NK06 481 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms