RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 SLAMF7Q9NQ25 335 aa5.07□□□□□ -1.6
BRCA2-202ENST00000470094 RLIMQ9NVW2 624 aa5.07□□□□□ -1.6
BRCA2-202ENST00000470094 CFAP97Q9P2B7 532 aa5.07□□□□□ -1.6
BRCA2-202ENST00000470094 HSFX1Q9UBD0 423 aa5.07□□□□□ -1.6
BRCA2-202ENST00000470094 SLC45A2Q9UMX9 530 aa5.07□□□□□ -1.6
BRCA2-202ENST00000470094 RAMP2O60895 175 aa5.06□□□□□ -1.6
BRCA2-202ENST00000470094 GJB1P08034 283 aa5.06□□□□□ -1.6
BRCA2-202ENST00000470094 ZEB1P37275 1124 aaPredicted RBP5.06□□□□□ -1.6
BRCA2-202ENST00000470094 IL12RB1P42701 662 aa5.06□□□□□ -1.6
BRCA2-202ENST00000470094 HMGA2P52926 109 aa5.06□□□□□ -1.6
BRCA2-202ENST00000470094 GTF2H3Q13889 308 aa5.06□□□□□ -1.6
BRCA2-202ENST00000470094 ZNF267Q14586 743 aaPredicted RBP5.06□□□□□ -1.6
BRCA2-202ENST00000470094 PPP2R5AQ15172 486 aa5.06□□□□□ -1.6
BRCA2-202ENST00000470094 ABHD17BQ5VST6 288 aa5.06□□□□□ -1.6
BRCA2-202ENST00000470094 LAIR1Q6GTX8 287 aa5.06□□□□□ -1.6
BRCA2-202ENST00000470094 MRGPRGQ86SM5 289 aa5.06□□□□□ -1.6
BRCA2-202ENST00000470094 FAM90A1Q86YD7 464 aa5.06□□□□□ -1.6
BRCA2-202ENST00000470094 PDSS2Q86YH6 399 aa5.06□□□□□ -1.6
BRCA2-202ENST00000470094 VRK3Q8IV63 474 aa5.06□□□□□ -1.6
BRCA2-202ENST00000470094 RAVER1Q8IY67 606 aaKnown RBP5.06□□□□□ -1.6
BRCA2-202ENST00000470094 COLGALT2Q8IYK4 626 aa5.06□□□□□ -1.6
BRCA2-202ENST00000470094 CHPFQ8IZ52 775 aa5.06□□□□□ -1.6
BRCA2-202ENST00000470094 SH2D3CQ8N5H7 860 aa5.06□□□□□ -1.6
BRCA2-202ENST00000470094 CAMKK1Q8N5S9 505 aa5.06□□□□□ -1.6
BRCA2-202ENST00000470094 SLC17A8Q8NDX2 589 aa5.06□□□□□ -1.6
BRCA2-202ENST00000470094 TMIEQ8NEW7 156 aa5.06□□□□□ -1.6
BRCA2-202ENST00000470094 C1GALT1C1Q96EU7 318 aa5.06□□□□□ -1.6
BRCA2-202ENST00000470094 CDK5RAP3Q96JB5 506 aa5.06□□□□□ -1.6
BRCA2-202ENST00000470094 TESQ9UGI8 421 aaKnown RBP5.06□□□□□ -1.6
BRCA2-202ENST00000470094 TCEAL9Q9UHQ7 104 aa5.06□□□□□ -1.6
BRCA2-202ENST00000470094 NR2E3Q9Y5X4 410 aa5.06□□□□□ -1.6
BRCA2-202ENST00000470094 EID1Q9Y6B2 187 aa5.06□□□□□ -1.6
BRCA2-202ENST00000470094 WDR33Q9C0J8 1336 aaKnown RBP5.05□□□□□ -1.6
BRCA2-202ENST00000470094 PIPSLA2A3N6 862 aa5.05□□□□□ -1.6
BRCA2-202ENST00000470094 MYADML2A6NDP7 307 aa5.05□□□□□ -1.6
BRCA2-202ENST00000470094 ZNF785A8K8V0 405 aa5.05□□□□□ -1.6
BRCA2-202ENST00000470094 H3BUI4 141 aa5.05□□□□□ -1.6
BRCA2-202ENST00000470094 PPM1GO15355 546 aaPredicted RBP5.05□□□□□ -1.6
BRCA2-202ENST00000470094 U2AF1L5P0DN76 240 aaPredicted RBP5.05□□□□□ -1.6
BRCA2-202ENST00000470094 ITGAMP11215 1152 aa5.05□□□□□ -1.6
BRCA2-202ENST00000470094 TYRP14679 529 aa5.05□□□□□ -1.6
BRCA2-202ENST00000470094 AVPR1BP47901 424 aa5.05□□□□□ -1.6
BRCA2-202ENST00000470094 USP14P54578 494 aa5.05□□□□□ -1.6
BRCA2-202ENST00000470094 PSMC1P62191 440 aaKnown RBP5.05□□□□□ -1.6
BRCA2-202ENST00000470094 BLOC1S1P78537 153 aa5.05□□□□□ -1.6
BRCA2-202ENST00000470094 U2AF1Q01081 240 aaKnown RBP eCLIP5.05□□□□□ -1.6
BRCA2-202ENST00000470094 TAP1Q03518 808 aa5.05□□□□□ -1.6
BRCA2-202ENST00000470094 FSTL1Q12841 308 aa5.05□□□□□ -1.6
BRCA2-202ENST00000470094 CYP2A13Q16696 494 aa5.05□□□□□ -1.6
BRCA2-202ENST00000470094 Q6ZPA2 131 aa5.05□□□□□ -1.6
BRCA2-202ENST00000470094 LDLRAD3Q86YD5 345 aa5.05□□□□□ -1.6
BRCA2-202ENST00000470094 PDPRQ8NCN5 879 aa5.05□□□□□ -1.6
BRCA2-202ENST00000470094 DIS3LQ8TF46 1054 aaKnown RBP5.05□□□□□ -1.6
BRCA2-202ENST00000470094 ASB10Q8WXI3 467 aa5.05□□□□□ -1.6
BRCA2-202ENST00000470094 TNPO1Q92973 898 aaKnown RBP5.05□□□□□ -1.6
BRCA2-202ENST00000470094 SCAMP4Q969E2 229 aa5.05□□□□□ -1.6
BRCA2-202ENST00000470094 MTFMTQ96DP5 389 aaKnown RBP5.05□□□□□ -1.6
BRCA2-202ENST00000470094 C1orf43Q9BWL3 253 aa5.05□□□□□ -1.6
BRCA2-202ENST00000470094 TMEM74BQ9NUR3 256 aa5.05□□□□□ -1.6
BRCA2-202ENST00000470094 TBCCD1Q9NVR7 557 aa5.05□□□□□ -1.6
BRCA2-202ENST00000470094 PNPOQ9NVS9 261 aa5.05□□□□□ -1.6
BRCA2-202ENST00000470094 ZDHHC8Q9ULC8 765 aa5.05□□□□□ -1.6
BRCA2-202ENST00000470094 G3BP2Q9UN86 482 aaKnown RBP5.05□□□□□ -1.6
BRCA2-202ENST00000470094 STXBP5LQ9Y2K9 1186 aa5.05□□□□□ -1.6
BRCA2-202ENST00000470094 NEU2Q9Y3R4 380 aa5.05□□□□□ -1.6
BRCA2-202ENST00000470094 FOXN1O15353 648 aa5.04□□□□□ -1.6
BRCA2-202ENST00000470094 SCGB1D2O95969 90 aa5.04□□□□□ -1.6
BRCA2-202ENST00000470094 ALDH2P05091 517 aa5.04□□□□□ -1.6
BRCA2-202ENST00000470094 RARBP10826 455 aa5.04□□□□□ -1.6
BRCA2-202ENST00000470094 KCNA2P16389 499 aa5.04□□□□□ -1.6
BRCA2-202ENST00000470094 KRT4P19013 534 aa5.04□□□□□ -1.6
BRCA2-202ENST00000470094 FDXRP22570 491 aa5.04□□□□□ -1.6
BRCA2-202ENST00000470094 PHKA1P46020 1223 aa5.04□□□□□ -1.6
BRCA2-202ENST00000470094 VAV2P52735 878 aa5.04□□□□□ -1.6
BRCA2-202ENST00000470094 NFE2Q16621 373 aaPredicted RBP5.04□□□□□ -1.6
BRCA2-202ENST00000470094 GEN1Q17RS7 908 aa5.04□□□□□ -1.6
BRCA2-202ENST00000470094 CXorf57Q6NSI4 855 aaKnown RBP5.04□□□□□ -1.6
BRCA2-202ENST00000470094 Q6YL49 198 aa5.04□□□□□ -1.6
BRCA2-202ENST00000470094 CLNKQ7Z7G1 428 aa5.04□□□□□ -1.6
BRCA2-202ENST00000470094 DENND1CQ8IV53 801 aa5.04□□□□□ -1.6
BRCA2-202ENST00000470094 CFAP52Q8N1V2 620 aa5.04□□□□□ -1.6
BRCA2-202ENST00000470094 SUPT20HQ8NEM7 779 aa5.04□□□□□ -1.6
BRCA2-202ENST00000470094 BRIX1Q8TDN6 353 aaKnown RBP5.04□□□□□ -1.6
BRCA2-202ENST00000470094 NACC2Q96BF6 587 aa5.04□□□□□ -1.6
BRCA2-202ENST00000470094 CHFRQ96EP1 664 aa5.04□□□□□ -1.6
BRCA2-202ENST00000470094 SLC35A4Q96G79 324 aa5.04□□□□□ -1.6
BRCA2-202ENST00000470094 CGRRF1Q99675 332 aa5.04□□□□□ -1.6
BRCA2-202ENST00000470094 SMOQ99835 787 aa5.04□□□□□ -1.6
BRCA2-202ENST00000470094 SIK2Q9H0K1 926 aa5.04□□□□□ -1.6
BRCA2-202ENST00000470094 MRPL46Q9H2W6 279 aaKnown RBP5.04□□□□□ -1.6
BRCA2-202ENST00000470094 NOB1Q9ULX3 412 aaKnown RBP5.04□□□□□ -1.6
BRCA2-202ENST00000470094 TRGV11A0A075B6L2 103 aa5.03□□□□□ -1.6
BRCA2-202ENST00000470094 A0A087X1B8 175 aa5.03□□□□□ -1.6
BRCA2-202ENST00000470094 CCDC195A0A1B0GUA6 201 aa5.03□□□□□ -1.6
BRCA2-202ENST00000470094 A0A1W2PS29 197 aa5.03□□□□□ -1.6
BRCA2-202ENST00000470094 GRID2IPA4D2P6 1211 aa5.03□□□□□ -1.6
BRCA2-202ENST00000470094 H3BML4 177 aa5.03□□□□□ -1.6
BRCA2-202ENST00000470094 TOR1BO14657 336 aa5.03□□□□□ -1.6
BRCA2-202ENST00000470094 MATN4O95460 622 aa5.03□□□□□ -1.6
BRCA2-202ENST00000470094 CHEK2O96017 543 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms