RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 SLC9A2Q9UBY0 812 aa14.49□□□□□ -0.09
BRCA1-209ENST00000470026 SEPT9Q9UHD8 586 aaPredicted RBP14.49□□□□□ -0.09
BRCA1-209ENST00000470026 AGO2Q9UKV8 859 aaKnown RBP14.49□□□□□ -0.09
BRCA1-209ENST00000470026 ZNF541Q9H0D2 1346 aa14.49□□□□□ -0.09
BRCA1-209ENST00000470026 TCRBV5S1A1TA0A578 114 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 STAM2O75886 525 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 UBOX5O94941 541 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 ATP6V1G2O95670 118 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 KCNA3P22001 575 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 TBXAS1P24557 533 aaPredicted RBP14.48□□□□□ -0.09
BRCA1-209ENST00000470026 SLC8A1P32418 973 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 RDXP35241 583 aaKnown RBP14.48□□□□□ -0.09
BRCA1-209ENST00000470026 ACTR2P61160 394 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 NCALDP61601 193 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 LMNB2Q03252 620 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 DAB2IPQ5VWQ8 1189 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 LMBRD2Q68DH5 695 aaPredicted RBP14.48□□□□□ -0.09
BRCA1-209ENST00000470026 TDRPQ86YL5 185 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 NIM1KQ8IY84 436 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 FEZF2Q8TBJ5 459 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 CCHCR1Q8TD31 782 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 MAF1Q9H063 256 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 DNAJC17Q9NVM6 304 aaKnown RBP14.48□□□□□ -0.09
BRCA1-209ENST00000470026 ARL2BPQ9Y2Y0 163 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 CTDP1Q9Y5B0 961 aaPredicted RBP14.48□□□□□ -0.09
BRCA1-209ENST00000470026 ADGRA2Q96PE1 1338 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 CNTNAP2Q9UHC6 1331 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 DOCK1Q14185 1865 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 TNNI1P19237 187 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 GNA15P30679 374 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 PTPN7P35236 360 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 NFX1Q12986 1120 aaKnown RBP14.48□□□□□ -0.09
BRCA1-209ENST00000470026 EMC2Q15006 297 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 LRRC38Q5VT99 294 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 NUGGCQ68CJ6 796 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 SLFN12LQ6IEE8 588 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 ARHGEF18Q6ZSZ5 1173 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 SPATA21Q7Z572 469 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 RCOR2Q8IZ40 523 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 MGARPQ8TDB4 240 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 CGRRF1Q99675 332 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 CCDC77Q9BR77 488 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 IP6K2Q9UHH9 426 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 MCM8Q9UJA3 840 aa14.48□□□□□ -0.09
BRCA1-209ENST00000470026 SPATA31C2B4DYI2 1134 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 LIASO43766 372 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 ATG7O95352 703 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 LDHAP00338 332 aaKnown RBP14.47□□□□□ -0.09
BRCA1-209ENST00000470026 SUPT20HL2P0C7V6 817 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 ALADP13716 330 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 ARL2P36404 184 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 NAMPTP43490 491 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 SLC18A1P54219 525 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 ZNF280AP59817 542 aaPredicted RBP14.47□□□□□ -0.09
BRCA1-209ENST00000470026 ACVR2BQ13705 512 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 TNFAIP1Q13829 316 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 SUPT20HL1Q3ZLR7 823 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 SMYD5Q6GMV2 418 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 CGB2Q6NT52 195 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 PPP1R21Q6ZMI0 780 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 RBBP8NLQ8NC74 664 aaPredicted RBP14.47□□□□□ -0.09
BRCA1-209ENST00000470026 PORCNQ9H237 461 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 DHX33Q9H6R0 707 aaKnown RBP14.47□□□□□ -0.09
BRCA1-209ENST00000470026 PARVAQ9NVD7 372 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 ZNF214Q9UL59 606 aaPredicted RBP14.47□□□□□ -0.09
BRCA1-209ENST00000470026 PCDHB4Q9Y5E5 795 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 CD2APQ9Y5K6 639 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 PHIPQ8WWQ0 1821 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 LOC285556D6RIA3 1793 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 MYH9P35579 1960 aaKnown RBP14.47□□□□□ -0.09
BRCA1-209ENST00000470026 A0A0B4J269 797 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 TMEM191CA6NGB0 347 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 FOXO6A8MYZ6 492 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 DNALI1O14645 258 aaPredicted RBP14.47□□□□□ -0.09
BRCA1-209ENST00000470026 ATP2A1O14983 1001 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 TLR3O15455 904 aaKnown RBP14.47□□□□□ -0.09
BRCA1-209ENST00000470026 MAGEB2O15479 319 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 GH1P01241 217 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 TMEM191BP0C7N4 346 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 ATP4AP20648 1035 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 MMP8P22894 467 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 GLRA2P23416 452 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 GCAP28676 217 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 MAGEA4P43358 317 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 ACOT2P49753 483 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 VPS41P49754 854 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 MCL1Q07820 350 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 STRN3Q13033 797 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 NR1H3Q13133 447 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 FAM133BQ5BKY9 247 aaKnown RBP14.47□□□□□ -0.09
BRCA1-209ENST00000470026 RNF43Q68DV7 783 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 MIS18BP1Q6P0N0 1132 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 TMEM270Q6UE05 265 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 ANKRD42Q8N9B4 389 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 ASAP3Q8TDY4 903 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 GRAMD1AQ96CP6 724 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 RBM41Q96IZ5 413 aaKnown RBP14.47□□□□□ -0.09
BRCA1-209ENST00000470026 C9orf72Q96LT7 481 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 SLITRK1Q96PX8 696 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 NOD2Q9HC29 1040 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms