RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 CAMK1Q14012 370 aa15.93■□□□□ 0.14
COL9A3-209ENST00000469852 KRT39Q6A163 491 aa15.93■□□□□ 0.14
COL9A3-209ENST00000469852 FUT10Q6P4F1 479 aa15.93■□□□□ 0.14
COL9A3-209ENST00000469852 SPPL3Q8TCT6 385 aa15.93■□□□□ 0.14
COL9A3-209ENST00000469852 TMEM169Q96HH4 297 aa15.93■□□□□ 0.14
COL9A3-209ENST00000469852 PI4K2AQ9BTU6 479 aa15.93■□□□□ 0.14
COL9A3-209ENST00000469852 XYLT2Q9H1B5 865 aa15.93■□□□□ 0.14
COL9A3-209ENST00000469852 MAGEC2Q9UBF1 373 aaPredicted RBP15.93■□□□□ 0.14
COL9A3-209ENST00000469852 PCDHGC5Q9Y5F6 944 aa15.93■□□□□ 0.14
COL9A3-209ENST00000469852 STX10O60499 249 aa15.92■□□□□ 0.14
COL9A3-209ENST00000469852 LPXNO60711 386 aa15.92■□□□□ 0.14
COL9A3-209ENST00000469852 CAVIN2O95810 425 aa15.92■□□□□ 0.14
COL9A3-209ENST00000469852 RB1P06400 928 aa15.92■□□□□ 0.14
COL9A3-209ENST00000469852 PRKCSHP14314 528 aaPredicted RBP15.92■□□□□ 0.14
COL9A3-209ENST00000469852 PIK3CAP42336 1068 aa15.92■□□□□ 0.14
COL9A3-209ENST00000469852 TAF6P49848 677 aa15.92■□□□□ 0.14
COL9A3-209ENST00000469852 MYL7Q01449 175 aa15.92■□□□□ 0.14
COL9A3-209ENST00000469852 GPM6BQ13491 265 aa15.92■□□□□ 0.14
COL9A3-209ENST00000469852 GRIN2CQ14957 1233 aa15.92■□□□□ 0.14
COL9A3-209ENST00000469852 MAN2A1Q16706 1144 aa15.92■□□□□ 0.14
COL9A3-209ENST00000469852 SPOPLQ6IQ16 392 aa15.92■□□□□ 0.14
COL9A3-209ENST00000469852 LRRC52Q8N7C0 313 aa15.92■□□□□ 0.14
COL9A3-209ENST00000469852 C11orf84Q9BUA3 381 aaPredicted RBP15.92■□□□□ 0.14
COL9A3-209ENST00000469852 VPS16Q9H269 839 aa15.92■□□□□ 0.14
COL9A3-209ENST00000469852 PRDM12Q9H4Q4 367 aa15.92■□□□□ 0.14
COL9A3-209ENST00000469852 LIMA1Q9UHB6 759 aaKnown RBP15.92■□□□□ 0.14
COL9A3-209ENST00000469852 NUB1Q9Y5A7 615 aa15.92■□□□□ 0.14
COL9A3-209ENST00000469852 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.92■□□□□ 0.14
COL9A3-209ENST00000469852 MYO9BQ13459 2157 aa15.92■□□□□ 0.14
COL9A3-209ENST00000469852 TKTP29401 623 aaKnown RBP15.91■□□□□ 0.14
COL9A3-209ENST00000469852 COPB1P53618 953 aaKnown RBP15.91■□□□□ 0.14
COL9A3-209ENST00000469852 ERVFC1P60507 584 aa15.91■□□□□ 0.14
COL9A3-209ENST00000469852 TRPC3Q13507 836 aa15.91■□□□□ 0.14
COL9A3-209ENST00000469852 VWA3BQ502W6 1294 aa15.91■□□□□ 0.14
COL9A3-209ENST00000469852 DDX53Q86TM3 631 aaKnown RBP15.91■□□□□ 0.14
COL9A3-209ENST00000469852 LMO3Q8TAP4 145 aa15.91■□□□□ 0.14
COL9A3-209ENST00000469852 POF1BQ8WVV4 589 aa15.91■□□□□ 0.14
COL9A3-209ENST00000469852 AUTS2Q8WXX7 1259 aa15.91■□□□□ 0.14
COL9A3-209ENST00000469852 HPDLQ96IR7 371 aa15.91■□□□□ 0.14
COL9A3-209ENST00000469852 SUSD3Q96L08 255 aa15.91■□□□□ 0.14
COL9A3-209ENST00000469852 SENP8Q96LD8 212 aa15.91■□□□□ 0.14
COL9A3-209ENST00000469852 RBSNQ9H1K0 784 aa15.91■□□□□ 0.14
COL9A3-209ENST00000469852 NDST4Q9H3R1 872 aa15.91■□□□□ 0.14
COL9A3-209ENST00000469852 APOBEC3GQ9HC16 384 aaKnown RBP15.91■□□□□ 0.14
COL9A3-209ENST00000469852 POLIQ9UNA4 740 aa15.91■□□□□ 0.14
COL9A3-209ENST00000469852 COQ4Q9Y3A0 265 aa15.91■□□□□ 0.14
COL9A3-209ENST00000469852 TIMM13Q9Y5L4 95 aaPredicted RBP15.91■□□□□ 0.14
COL9A3-209ENST00000469852 SF3B1O75533 1304 aaKnown RBP eCLIP15.91■□□□□ 0.14
COL9A3-209ENST00000469852 TMEM265A0A087WTH1 108 aa15.9■□□□□ 0.14
COL9A3-209ENST00000469852 KPNA7A9QM74 516 aa15.9■□□□□ 0.14
COL9A3-209ENST00000469852 M0QZQ0 153 aa15.9■□□□□ 0.14
COL9A3-209ENST00000469852 ASS1P00966 412 aaKnown RBP15.9■□□□□ 0.14
COL9A3-209ENST00000469852 SOD2P04179 222 aa15.9■□□□□ 0.14
COL9A3-209ENST00000469852 CDK11BP21127 795 aaKnown RBP15.9■□□□□ 0.14
COL9A3-209ENST00000469852 IRS1P35568 1242 aa15.9■□□□□ 0.14
COL9A3-209ENST00000469852 ZNF699Q32M78 642 aa15.9■□□□□ 0.14
COL9A3-209ENST00000469852 RTP2Q5QGT7 225 aa15.9■□□□□ 0.14
COL9A3-209ENST00000469852 FAM171A1Q5VUB5 890 aa15.9■□□□□ 0.14
COL9A3-209ENST00000469852 VPS52Q8N1B4 723 aa15.9■□□□□ 0.14
COL9A3-209ENST00000469852 FBXL13Q8NEE6 735 aa15.9■□□□□ 0.14
COL9A3-209ENST00000469852 ZNF560Q96MR9 790 aa15.9■□□□□ 0.14
COL9A3-209ENST00000469852 HERC2P3Q9BVR0 1158 aa15.9■□□□□ 0.14
COL9A3-209ENST00000469852 ZBP1Q9H171 429 aa15.9■□□□□ 0.14
COL9A3-209ENST00000469852 RAB20Q9NX57 234 aa15.9■□□□□ 0.14
COL9A3-209ENST00000469852 MYO7AQ13402 2215 aa15.9■□□□□ 0.14
COL9A3-209ENST00000469852 PMM2O15305 246 aa15.89■□□□□ 0.13
COL9A3-209ENST00000469852 STAU1O95793 577 aaKnown RBP15.89■□□□□ 0.13
COL9A3-209ENST00000469852 FGFR3P22607 806 aa15.89■□□□□ 0.13
COL9A3-209ENST00000469852 PNPLA4P41247 253 aa15.89■□□□□ 0.13
COL9A3-209ENST00000469852 APBA1Q02410 837 aa15.89■□□□□ 0.13
COL9A3-209ENST00000469852 KRT17Q04695 432 aa15.89■□□□□ 0.13
COL9A3-209ENST00000469852 PTPN21Q16825 1174 aa15.89■□□□□ 0.13
COL9A3-209ENST00000469852 WDR72Q3MJ13 1102 aa15.89■□□□□ 0.13
COL9A3-209ENST00000469852 SV2CQ496J9 727 aa15.89■□□□□ 0.13
COL9A3-209ENST00000469852 DSTYKQ6XUX3 929 aa15.89■□□□□ 0.13
COL9A3-209ENST00000469852 MYLIPQ8WY64 445 aa15.89■□□□□ 0.13
COL9A3-209ENST00000469852 TATDN2Q93075 761 aa15.89■□□□□ 0.13
COL9A3-209ENST00000469852 CRACR2AQ9BSW2 395 aa15.89■□□□□ 0.13
COL9A3-209ENST00000469852 SDCBP2Q9H190 292 aa15.89■□□□□ 0.13
COL9A3-209ENST00000469852 CHST7Q9NS84 486 aa15.89■□□□□ 0.13
COL9A3-209ENST00000469852 L1RE1Q9UN81 338 aa15.89■□□□□ 0.13
COL9A3-209ENST00000469852 LZTS1Q9Y250 596 aa15.89■□□□□ 0.13
COL9A3-209ENST00000469852 SNX9Q9Y5X1 595 aa15.89■□□□□ 0.13
COL9A3-209ENST00000469852 VCANP13611 3396 aa15.89■□□□□ 0.13
COL9A3-209ENST00000469852 CARNS1A5YM72 827 aa15.88■□□□□ 0.13
COL9A3-209ENST00000469852 LRRC10BA6NIK2 292 aa15.88■□□□□ 0.13
COL9A3-209ENST00000469852 GOLGA6L19H0YKK7 550 aa15.88■□□□□ 0.13
COL9A3-209ENST00000469852 PES1O00541 588 aaKnown RBP15.88■□□□□ 0.13
COL9A3-209ENST00000469852 C2CD2LO14523 706 aa15.88■□□□□ 0.13
COL9A3-209ENST00000469852 CYB561D2O14569 222 aa15.88■□□□□ 0.13
COL9A3-209ENST00000469852 FSCN2O14926 492 aa15.88■□□□□ 0.13
COL9A3-209ENST00000469852 N4BP1O75113 896 aaKnown RBP15.88■□□□□ 0.13
COL9A3-209ENST00000469852 ATICP31939 592 aa15.88■□□□□ 0.13
COL9A3-209ENST00000469852 NOP14P78316 857 aaKnown RBP15.88■□□□□ 0.13
COL9A3-209ENST00000469852 LRMPQ12912 555 aa15.88■□□□□ 0.13
COL9A3-209ENST00000469852 MYO1EQ12965 1108 aa15.88■□□□□ 0.13
COL9A3-209ENST00000469852 ADGRE1Q14246 886 aa15.88■□□□□ 0.13
COL9A3-209ENST00000469852 SOWAHAQ2M3V2 549 aa15.88■□□□□ 0.13
COL9A3-209ENST00000469852 SGSM1Q2NKQ1 1148 aa15.88■□□□□ 0.13
COL9A3-209ENST00000469852 PRSS55Q6UWB4 352 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms