RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 MRPS23Q9Y3D9 190 aaKnown RBP17.71■□□□□ 0.43
COL9A3-208ENST00000469802 FRMD3A2A2Y4 597 aa17.7■□□□□ 0.42
COL9A3-208ENST00000469802 PROB1E7EW31 1015 aa17.7■□□□□ 0.42
COL9A3-208ENST00000469802 ELF1P32519 619 aa17.7■□□□□ 0.42
COL9A3-208ENST00000469802 POU5F1Q01860 360 aaKnown RBP17.7■□□□□ 0.42
COL9A3-208ENST00000469802 YWHAHQ04917 246 aaPredicted RBP17.7■□□□□ 0.42
COL9A3-208ENST00000469802 ADCY1Q08828 1119 aa17.7■□□□□ 0.42
COL9A3-208ENST00000469802 SLFN12LQ6IEE8 588 aa17.7■□□□□ 0.42
COL9A3-208ENST00000469802 PHLDB3Q6NSJ2 640 aa17.7■□□□□ 0.42
COL9A3-208ENST00000469802 ING5Q8WYH8 240 aa17.7■□□□□ 0.42
COL9A3-208ENST00000469802 ATOH1Q92858 354 aaPredicted RBP17.7■□□□□ 0.42
COL9A3-208ENST00000469802 OXCT2Q9BYC2 517 aaPredicted RBP17.7■□□□□ 0.42
COL9A3-208ENST00000469802 IKZF4Q9H2S9 585 aa17.7■□□□□ 0.42
COL9A3-208ENST00000469802 ASB7Q9H672 318 aa17.7■□□□□ 0.42
COL9A3-208ENST00000469802 TBC1D17Q9HA65 648 aa17.7■□□□□ 0.42
COL9A3-208ENST00000469802 OLFML3Q9NRN5 406 aa17.7■□□□□ 0.42
COL9A3-208ENST00000469802 GDE1Q9NZC3 331 aa17.7■□□□□ 0.42
COL9A3-208ENST00000469802 C2CD2Q9Y426 696 aa17.7■□□□□ 0.42
COL9A3-208ENST00000469802 DENND4CQ5VZ89 1909 aa17.7■□□□□ 0.42
COL9A3-208ENST00000469802 VPS13AQ96RL7 3174 aa17.7■□□□□ 0.42
COL9A3-208ENST00000469802 TICRRQ7Z2Z1 1910 aa17.69■□□□□ 0.42
COL9A3-208ENST00000469802 ANO9A1A5B4 782 aa17.69■□□□□ 0.42
COL9A3-208ENST00000469802 CPB1P15086 417 aa17.69■□□□□ 0.42
COL9A3-208ENST00000469802 CEBPBP17676 345 aa17.69■□□□□ 0.42
COL9A3-208ENST00000469802 GAP43P17677 238 aa17.69■□□□□ 0.42
COL9A3-208ENST00000469802 PTPN2P17706 415 aa17.69■□□□□ 0.42
COL9A3-208ENST00000469802 TYMPP19971 482 aa17.69■□□□□ 0.42
COL9A3-208ENST00000469802 PAX3P23760 479 aa17.69■□□□□ 0.42
COL9A3-208ENST00000469802 ADSSP30520 456 aa17.69■□□□□ 0.42
COL9A3-208ENST00000469802 ACOT2P49753 483 aa17.69■□□□□ 0.42
COL9A3-208ENST00000469802 LILRA4P59901 499 aa17.69■□□□□ 0.42
COL9A3-208ENST00000469802 GPC5P78333 572 aa17.69■□□□□ 0.42
COL9A3-208ENST00000469802 TMEM132DQ14C87 1099 aa17.69■□□□□ 0.42
COL9A3-208ENST00000469802 C9orf57Q5W0N0 161 aa17.69■□□□□ 0.42
COL9A3-208ENST00000469802 ADALQ6DHV7 355 aa17.69■□□□□ 0.42
COL9A3-208ENST00000469802 CRELD2Q6UXH1 353 aaPredicted RBP17.69■□□□□ 0.42
COL9A3-208ENST00000469802 RNF19BQ6ZMZ0 732 aa17.69■□□□□ 0.42
COL9A3-208ENST00000469802 CCDC73Q6ZRK6 1079 aa17.69■□□□□ 0.42
COL9A3-208ENST00000469802 SV2BQ7L1I2 683 aa17.69■□□□□ 0.42
COL9A3-208ENST00000469802 SNX21Q969T3 373 aa17.69■□□□□ 0.42
COL9A3-208ENST00000469802 KXD1Q9BQD3 176 aa17.69■□□□□ 0.42
COL9A3-208ENST00000469802 FOXD4L1Q9NU39 408 aa17.69■□□□□ 0.42
COL9A3-208ENST00000469802 AGO2Q9UKV8 859 aaKnown RBP17.69■□□□□ 0.42
COL9A3-208ENST00000469802 TIMM13Q9Y5L4 95 aaPredicted RBP17.69■□□□□ 0.42
COL9A3-208ENST00000469802 OBSL1O75147 1896 aa17.69■□□□□ 0.42
COL9A3-208ENST00000469802 PIRO00625 290 aa17.68■□□□□ 0.42
COL9A3-208ENST00000469802 NRG2O14511 850 aaPredicted RBP17.68■□□□□ 0.42
COL9A3-208ENST00000469802 SPTLC1O15269 473 aa17.68■□□□□ 0.42
COL9A3-208ENST00000469802 ECI2O75521 394 aa17.68■□□□□ 0.42
COL9A3-208ENST00000469802 MICAL2O94851 1124 aa17.68■□□□□ 0.42
COL9A3-208ENST00000469802 NBL1P41271 181 aa17.68■□□□□ 0.42
COL9A3-208ENST00000469802 CCR2P41597 374 aa17.68■□□□□ 0.42
COL9A3-208ENST00000469802 EPHA5P54756 1037 aa17.68■□□□□ 0.42
COL9A3-208ENST00000469802 KCNA1Q09470 495 aa17.68■□□□□ 0.42
COL9A3-208ENST00000469802 DTWD2Q8NBA8 298 aa17.68■□□□□ 0.42
COL9A3-208ENST00000469802 LINC00301Q8NCQ3 95 aa17.68■□□□□ 0.42
COL9A3-208ENST00000469802 CORO1BQ9BR76 489 aa17.68■□□□□ 0.42
COL9A3-208ENST00000469802 DDX23Q9BUQ8 820 aaKnown RBP17.68■□□□□ 0.42
COL9A3-208ENST00000469802 MRPL44Q9H9J2 332 aaKnown RBP17.68■□□□□ 0.42
COL9A3-208ENST00000469802 DLGAP2Q9P1A6 1054 aa17.68■□□□□ 0.42
COL9A3-208ENST00000469802 CEP72Q9P209 647 aa17.68■□□□□ 0.42
COL9A3-208ENST00000469802 KIF26AQ9ULI4 1882 aaPredicted RBP17.67■□□□□ 0.42
COL9A3-208ENST00000469802 ZFHX2Q9C0A1 2572 aaPredicted RBP17.67■□□□□ 0.42
COL9A3-208ENST00000469802 OR6C75A6NL08 312 aa17.67■□□□□ 0.42
COL9A3-208ENST00000469802 FCARP24071 287 aa17.67■□□□□ 0.42
COL9A3-208ENST00000469802 STAT6P42226 847 aa17.67■□□□□ 0.42
COL9A3-208ENST00000469802 CASP5P51878 434 aa17.67■□□□□ 0.42
COL9A3-208ENST00000469802 STARD6P59095 220 aa17.67■□□□□ 0.42
COL9A3-208ENST00000469802 GPR17Q13304 367 aa17.67■□□□□ 0.42
COL9A3-208ENST00000469802 MYBPC2Q14324 1141 aa17.67■□□□□ 0.42
COL9A3-208ENST00000469802 L1TD1Q5T7N2 865 aaKnown RBP17.67■□□□□ 0.42
COL9A3-208ENST00000469802 OVOS1Q6IE37 1185 aa17.67■□□□□ 0.42
COL9A3-208ENST00000469802 EFCAB13Q8IY85 973 aa17.67■□□□□ 0.42
COL9A3-208ENST00000469802 TCEAL4Q96EI5 215 aa17.67■□□□□ 0.42
COL9A3-208ENST00000469802 FAM212AQ96EL1 285 aa17.67■□□□□ 0.42
COL9A3-208ENST00000469802 SENP8Q96LD8 212 aa17.67■□□□□ 0.42
COL9A3-208ENST00000469802 FGFBP2Q9BYJ0 223 aa17.67■□□□□ 0.42
COL9A3-208ENST00000469802 CRISPLD1Q9H336 500 aa17.67■□□□□ 0.42
COL9A3-208ENST00000469802 YIPF1Q9Y548 306 aa17.67■□□□□ 0.42
COL9A3-208ENST00000469802 MOSPD3O75425 235 aa17.66■□□□□ 0.42
COL9A3-208ENST00000469802 CYP11A1P05108 521 aa17.66■□□□□ 0.42
COL9A3-208ENST00000469802 OR4Q2P0C623 313 aa17.66■□□□□ 0.42
COL9A3-208ENST00000469802 ODC1P11926 461 aa17.66■□□□□ 0.42
COL9A3-208ENST00000469802 TWF1Q12792 350 aa17.66■□□□□ 0.42
COL9A3-208ENST00000469802 POSTNQ15063 836 aa17.66■□□□□ 0.42
COL9A3-208ENST00000469802 E2F4Q16254 413 aa17.66■□□□□ 0.42
COL9A3-208ENST00000469802 DSTYKQ6XUX3 929 aa17.66■□□□□ 0.42
COL9A3-208ENST00000469802 PDZD4Q76G19 769 aaPredicted RBP17.66■□□□□ 0.42
COL9A3-208ENST00000469802 USP37Q86T82 979 aa17.66■□□□□ 0.42
COL9A3-208ENST00000469802 LEMD2Q8NC56 503 aa17.66■□□□□ 0.42
COL9A3-208ENST00000469802 POMGNT1Q8WZA1 660 aa17.66■□□□□ 0.42
COL9A3-208ENST00000469802 MCRS1Q96EZ8 462 aa17.66■□□□□ 0.42
COL9A3-208ENST00000469802 CACNA1IQ9P0X4 2223 aa17.66■□□□□ 0.42
COL9A3-208ENST00000469802 MTMR11A4FU01 709 aa17.65■□□□□ 0.42
COL9A3-208ENST00000469802 ZNF197O14709 1029 aa17.65■□□□□ 0.42
COL9A3-208ENST00000469802 GCNT3O95395 438 aa17.65■□□□□ 0.42
COL9A3-208ENST00000469802 WNT7BP56706 349 aa17.65■□□□□ 0.42
COL9A3-208ENST00000469802 PFKPQ01813 784 aa17.65■□□□□ 0.42
COL9A3-208ENST00000469802 PRKCQQ04759 706 aa17.65■□□□□ 0.42
COL9A3-208ENST00000469802 ALCAMQ13740 583 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms