RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 KLF1Q13351 362 aaPredicted RBP16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 CCNG2Q16589 344 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 IZUMO3Q5VZ72 239 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 C15orf39Q6ZRI6 1047 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 MON1BQ7L1V2 547 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 APOBEC3FQ8IUX4 373 aaKnown RBP16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 RHOT1Q8IXI2 618 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 AS3MTQ9HBK9 375 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 GPRC5DQ9NZD1 345 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 NEU2Q9Y3R4 380 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 HLA-DRAP01903 254 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 SSTR3P32745 418 aaPredicted RBP16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 PTP4A2Q12974 167 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 NEDD9Q14511 834 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 LIN9Q5TKA1 542 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 SNRNP48Q6IEG0 339 aaKnown RBP16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 SPOPLQ6IQ16 392 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 PASD1Q8IV76 773 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 KIRREL3Q8IZU9 778 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 RDM1Q8NG50 284 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 C9orf72Q96LT7 481 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 FNBP1Q96RU3 617 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 MCM8Q9UJA3 840 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 NAALADL1Q9UQQ1 740 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 USTQ9Y2C2 406 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 UMODL1Q5DID0 1318 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 CFHP08603 1231 aa16.75■□□□□ 0.27
TSPAN4-211ENST00000468468 EZRP15311 586 aaKnown RBP16.75■□□□□ 0.27
TSPAN4-211ENST00000468468 STX2P32856 288 aa16.75■□□□□ 0.27
TSPAN4-211ENST00000468468 ADCY1Q08828 1119 aa16.75■□□□□ 0.27
TSPAN4-211ENST00000468468 ZKSCAN8Q15776 578 aaPredicted RBP16.75■□□□□ 0.27
TSPAN4-211ENST00000468468 FAM43BQ6ZT52 329 aaPredicted RBP16.75■□□□□ 0.27
TSPAN4-211ENST00000468468 TAS1R3Q7RTX0 852 aa16.75■□□□□ 0.27
TSPAN4-211ENST00000468468 PRUNE1Q86TP1 453 aa16.75■□□□□ 0.27
TSPAN4-211ENST00000468468 SRRM1Q8IYB3 904 aaKnown RBP16.75■□□□□ 0.27
TSPAN4-211ENST00000468468 CCDC89Q8N998 374 aa16.75■□□□□ 0.27
TSPAN4-211ENST00000468468 BBOF1Q8ND07 529 aa16.75■□□□□ 0.27
TSPAN4-211ENST00000468468 OSBPL8Q9BZF1 889 aa16.75■□□□□ 0.27
TSPAN4-211ENST00000468468 PSTPIP1O43586 416 aa16.75■□□□□ 0.27
TSPAN4-211ENST00000468468 CD58P19256 250 aa16.75■□□□□ 0.27
TSPAN4-211ENST00000468468 PIK3CAP42336 1068 aa16.75■□□□□ 0.27
TSPAN4-211ENST00000468468 SWSAP1Q6NVH7 229 aa16.75■□□□□ 0.27
TSPAN4-211ENST00000468468 SEPT14Q6ZU15 432 aa16.75■□□□□ 0.27
TSPAN4-211ENST00000468468 GSTA5Q7RTV2 222 aa16.75■□□□□ 0.27
TSPAN4-211ENST00000468468 SPATA21Q7Z572 469 aa16.75■□□□□ 0.27
TSPAN4-211ENST00000468468 REPS2Q8NFH8 660 aa16.75■□□□□ 0.27
TSPAN4-211ENST00000468468 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.75■□□□□ 0.27
TSPAN4-211ENST00000468468 ATP6V0A1Q93050 837 aa16.75■□□□□ 0.27
TSPAN4-211ENST00000468468 KLRG1Q96E93 195 aa16.75■□□□□ 0.27
TSPAN4-211ENST00000468468 TGS1Q96RS0 853 aaKnown RBP16.75■□□□□ 0.27
TSPAN4-211ENST00000468468 CCDC77Q9BR77 488 aa16.75■□□□□ 0.27
TSPAN4-211ENST00000468468 ECT2Q9H8V3 914 aa16.75■□□□□ 0.27
TSPAN4-211ENST00000468468 ADAM22Q9P0K1 906 aa16.75■□□□□ 0.27
TSPAN4-211ENST00000468468 LGALS13Q9UHV8 139 aa16.75■□□□□ 0.27
TSPAN4-211ENST00000468468 GSTTP1A0A1W2PQM5 241 aa16.74■□□□□ 0.27
TSPAN4-211ENST00000468468 EXTL3O43909 919 aa16.74■□□□□ 0.27
TSPAN4-211ENST00000468468 CDH16O75309 829 aa16.74■□□□□ 0.27
TSPAN4-211ENST00000468468 STBD1O95210 358 aa16.74■□□□□ 0.27
TSPAN4-211ENST00000468468 DSG3P32926 999 aa16.74■□□□□ 0.27
TSPAN4-211ENST00000468468 LIG4P49917 911 aa16.74■□□□□ 0.27
TSPAN4-211ENST00000468468 NCALDP61601 193 aa16.74■□□□□ 0.27
TSPAN4-211ENST00000468468 SP4Q02446 784 aa16.74■□□□□ 0.27
TSPAN4-211ENST00000468468 ENPEPQ07075 957 aa16.74■□□□□ 0.27
TSPAN4-211ENST00000468468 IFT74Q96LB3 600 aa16.74■□□□□ 0.27
TSPAN4-211ENST00000468468 XPNPEP1Q9NQW7 623 aa16.74■□□□□ 0.27
TSPAN4-211ENST00000468468 ARL2BPQ9Y2Y0 163 aa16.74■□□□□ 0.27
TSPAN4-211ENST00000468468 DGAT1O75907 488 aa16.74■□□□□ 0.27
TSPAN4-211ENST00000468468 FDX1P10109 184 aa16.74■□□□□ 0.27
TSPAN4-211ENST00000468468 WNT7BP56706 349 aa16.74■□□□□ 0.27
TSPAN4-211ENST00000468468 MAMLD1Q13495 774 aa16.74■□□□□ 0.27
TSPAN4-211ENST00000468468 TMEM132BQ14DG7 1078 aa16.74■□□□□ 0.27
TSPAN4-211ENST00000468468 ZACNQ401N2 412 aa16.74■□□□□ 0.27
TSPAN4-211ENST00000468468 GALNTL6Q49A17 601 aa16.74■□□□□ 0.27
TSPAN4-211ENST00000468468 TDRD10Q5VZ19 366 aaKnown RBP16.74■□□□□ 0.27
TSPAN4-211ENST00000468468 MCPH1Q8NEM0 835 aa16.74■□□□□ 0.27
TSPAN4-211ENST00000468468 TBC1D31Q96DN5 1066 aa16.74■□□□□ 0.27
TSPAN4-211ENST00000468468 NKIRAS1Q9NYS0 192 aa16.74■□□□□ 0.27
TSPAN4-211ENST00000468468 SEPT9Q9UHD8 586 aaPredicted RBP16.74■□□□□ 0.27
TSPAN4-211ENST00000468468 ZNF214Q9UL59 606 aaPredicted RBP16.74■□□□□ 0.27
TSPAN4-211ENST00000468468 TELO2Q9Y4R8 837 aa16.74■□□□□ 0.27
TSPAN4-211ENST00000468468 PCDHB4Q9Y5E5 795 aa16.74■□□□□ 0.27
TSPAN4-211ENST00000468468 SSC5DA1L4H1 1573 aa16.73■□□□□ 0.27
TSPAN4-211ENST00000468468 C4BPAP04003 597 aaKnown RBP16.73■□□□□ 0.27
TSPAN4-211ENST00000468468 CCND2P30279 289 aa16.73■□□□□ 0.27
TSPAN4-211ENST00000468468 KCNJ2P63252 427 aa16.73■□□□□ 0.27
TSPAN4-211ENST00000468468 STAT4Q14765 748 aa16.73■□□□□ 0.27
TSPAN4-211ENST00000468468 PSMD6Q15008 389 aa16.73■□□□□ 0.27
TSPAN4-211ENST00000468468 ARHGEF18Q6ZSZ5 1173 aa16.73■□□□□ 0.27
TSPAN4-211ENST00000468468 ANKS1BQ7Z6G8 1248 aa16.73■□□□□ 0.27
TSPAN4-211ENST00000468468 KATNAL2Q8IYT4 538 aa16.73■□□□□ 0.27
TSPAN4-211ENST00000468468 SENP7Q9BQF6 1050 aa16.73■□□□□ 0.27
TSPAN4-211ENST00000468468 TACO1Q9BSH4 297 aaKnown RBP16.73■□□□□ 0.27
TSPAN4-211ENST00000468468 POLR3FQ9H1D9 316 aaPredicted RBP16.73■□□□□ 0.27
TSPAN4-211ENST00000468468 MRPL47Q9HD33 250 aaKnown RBP16.73■□□□□ 0.27
TSPAN4-211ENST00000468468 PDLIM7Q9NR12 457 aa16.73■□□□□ 0.27
TSPAN4-211ENST00000468468 NR3C2P08235 984 aa16.73■□□□□ 0.27
TSPAN4-211ENST00000468468 NQO1P15559 274 aaKnown RBP16.73■□□□□ 0.27
TSPAN4-211ENST00000468468 ACO1P21399 889 aaKnown RBP16.73■□□□□ 0.27
TSPAN4-211ENST00000468468 NF2P35240 595 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms