RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 ANGPT1Q15389 498 aa6.29□□□□□ -1.4
PTCD3-207ENST00000467273 SYDE2Q5VT97 1194 aa6.29□□□□□ -1.4
PTCD3-207ENST00000467273 OVOS1Q6IE37 1185 aa6.29□□□□□ -1.4
PTCD3-207ENST00000467273 ZNF746Q6NUN9 644 aaPredicted RBP6.29□□□□□ -1.4
PTCD3-207ENST00000467273 LETMD1Q6P1Q0 360 aa6.29□□□□□ -1.4
PTCD3-207ENST00000467273 ADGRD2Q7Z7M1 963 aa6.29□□□□□ -1.4
PTCD3-207ENST00000467273 GGNQ86UU5 652 aa6.29□□□□□ -1.4
PTCD3-207ENST00000467273 CREG2Q8IUH2 290 aa6.29□□□□□ -1.4
PTCD3-207ENST00000467273 TMEM57Q8N5G2 664 aa6.29□□□□□ -1.4
PTCD3-207ENST00000467273 MICAL1Q8TDZ2 1067 aa6.29□□□□□ -1.4
PTCD3-207ENST00000467273 RUBCNQ92622 972 aa6.29□□□□□ -1.4
PTCD3-207ENST00000467273 MRFAP1L1Q96HT8 127 aa6.29□□□□□ -1.4
PTCD3-207ENST00000467273 SRPK1Q96SB4 655 aaKnown RBP6.29□□□□□ -1.4
PTCD3-207ENST00000467273 NACAP1Q9BZK3 213 aa6.29□□□□□ -1.4
PTCD3-207ENST00000467273 WNT10AQ9GZT5 417 aa6.29□□□□□ -1.4
PTCD3-207ENST00000467273 S1PR5Q9H228 398 aa6.29□□□□□ -1.4
PTCD3-207ENST00000467273 RTEL1Q9NZ71 1219 aa6.29□□□□□ -1.4
PTCD3-207ENST00000467273 BARX2Q9UMQ3 279 aaPredicted RBP6.29□□□□□ -1.4
PTCD3-207ENST00000467273 STX8Q9UNK0 236 aa6.29□□□□□ -1.4
PTCD3-207ENST00000467273 USP24Q9UPU5 2620 aa6.29□□□□□ -1.4
PTCD3-207ENST00000467273 EXOC6BQ9Y2D4 811 aa6.29□□□□□ -1.4
PTCD3-207ENST00000467273 ANKRD11Q6UB99 2663 aaPredicted RBP6.28□□□□□ -1.4
PTCD3-207ENST00000467273 KIAA1671Q9BY89 1806 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 A0A1W2PQH9 124 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 FAM221BA6H8Z2 402 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 MEIS3P2A8K0S8 358 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 CHURC1-FNTBB4DL54 471 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 TPD52L2O43399 206 aaKnown RBP6.28□□□□□ -1.4
PTCD3-207ENST00000467273 RAB11FIP3O75154 756 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 SEMA7AO75326 666 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 PRDM1O75626 825 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 ESR1P03372 595 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 ZFYP08048 801 aaPredicted RBP6.28□□□□□ -1.4
PTCD3-207ENST00000467273 ZNF286BP0CG31 522 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 DNAJB1P25685 340 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 KRTAP10-2P60368 255 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 ETF1P62495 437 aaKnown RBP6.28□□□□□ -1.4
PTCD3-207ENST00000467273 ITIH3Q06033 890 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 DUSP6Q16828 381 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 ST3GAL2Q16842 350 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 ZNF385BQ569K4 471 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 TMEM201Q5SNT2 666 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 LARP1BQ659C4 914 aaKnown RBP6.28□□□□□ -1.4
PTCD3-207ENST00000467273 CEP85Q6P2H3 762 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 SEPT14Q6ZU15 432 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 CHST3Q7LGC8 479 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 TMPRSS7Q7RTY8 843 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 ZDHHC14Q8IZN3 488 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 RIN3Q8TB24 985 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 POF1BQ8WVV4 589 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 APPBP2Q92624 585 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 C16orf70Q9BSU1 422 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 FTHL17Q9BXU8 183 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 SLC6A17Q9H1V8 727 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 IL1RAPL2Q9NP60 686 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 SNTG2Q9NY99 539 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 GMIPQ9P107 970 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 KLHL3Q9UH77 587 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 LZTS1Q9Y250 596 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 TMA7Q9Y2S6 64 aaKnown RBP6.28□□□□□ -1.4
PTCD3-207ENST00000467273 KCTD3Q9Y597 815 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 SQORQ9Y6N5 450 aa6.28□□□□□ -1.4
PTCD3-207ENST00000467273 OTOGLQ3ZCN5 2332 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 MYH7BA7E2Y1 1941 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 MYOCOSA0A1B0GUC4 107 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 TSPY2A6NKD2 308 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 ENPP3O14638 875 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 GPAA1O43292 621 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 CENPBP07199 599 aaPredicted RBP6.27□□□□□ -1.41
PTCD3-207ENST00000467273 STAG3L1P0CL83 205 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 GUCY2CP25092 1073 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 MTHFRP42898 656 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 SNAP25P60880 206 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 ZNF200P98182 395 aaPredicted RBP6.27□□□□□ -1.41
PTCD3-207ENST00000467273 TNK2Q07912 1038 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 SLBPQ14493 270 aaKnown RBP eCLIP6.27□□□□□ -1.41
PTCD3-207ENST00000467273 NKG7Q16617 165 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 DDR2Q16832 855 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 CCDC96Q2M329 555 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 SKOR2Q2VWA4 1001 aaPredicted RBP6.27□□□□□ -1.41
PTCD3-207ENST00000467273 CELF3Q5SZQ8 465 aaKnown RBP6.27□□□□□ -1.41
PTCD3-207ENST00000467273 ZKSCAN2Q63HK3 967 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 CES5AQ6NT32 575 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 ANKRD54Q6NXT1 300 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 TAF2Q6P1X5 1199 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 RASGRP2Q7LDG7 609 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 RSPH3Q86UC2 560 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 JAZF1Q86VZ6 243 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 IRF2BP1Q8IU81 584 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 KIAA2013Q8IYS2 634 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 MFSD2AQ8NA29 543 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 KBTBD3Q8NAB2 608 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 DTWD2Q8NBA8 298 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 KCNG4Q8TDN1 519 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 FRAT1Q92837 279 aaPredicted RBP6.27□□□□□ -1.41
PTCD3-207ENST00000467273 ACSF2Q96CM8 615 aaPredicted RBP6.27□□□□□ -1.41
PTCD3-207ENST00000467273 SPATA33Q96N06 139 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 DEPDC7Q96QD5 511 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 RMDN3Q96TC7 470 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 TM9SF2Q99805 663 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms