RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 TBC1D15Q8TC07 691 aa5.47□□□□□ -1.53
SMC4-207ENST00000467263 NSUN6Q8TEA1 469 aaKnown RBP5.47□□□□□ -1.53
SMC4-207ENST00000467263 RHOBTB2Q9BYZ6 727 aa5.47□□□□□ -1.53
SMC4-207ENST00000467263 GTPBP4Q9BZE4 634 aaKnown RBP5.47□□□□□ -1.53
SMC4-207ENST00000467263 REXO4Q9GZR2 422 aaKnown RBP5.47□□□□□ -1.53
SMC4-207ENST00000467263 TCF7L1Q9HCS4 588 aa5.47□□□□□ -1.53
SMC4-207ENST00000467263 FAM30AQ9NZY2 134 aa5.47□□□□□ -1.53
SMC4-207ENST00000467263 USP25Q9UHP3 1055 aa5.47□□□□□ -1.53
SMC4-207ENST00000467263 ANKRD6Q9Y2G4 727 aa5.47□□□□□ -1.53
SMC4-207ENST00000467263 THRAP3Q9Y2W1 955 aaKnown RBP5.47□□□□□ -1.53
SMC4-207ENST00000467263 A0A1B0GTW7 788 aa5.46□□□□□ -1.54
SMC4-207ENST00000467263 DTNBO60941 627 aa5.46□□□□□ -1.54
SMC4-207ENST00000467263 MATN4O95460 622 aa5.46□□□□□ -1.54
SMC4-207ENST00000467263 CFIP05156 583 aa5.46□□□□□ -1.54
SMC4-207ENST00000467263 HLA-DOAP06340 250 aa5.46□□□□□ -1.54
SMC4-207ENST00000467263 GCSHP23434 173 aa5.46□□□□□ -1.54
SMC4-207ENST00000467263 NOMO3P69849 1222 aa5.46□□□□□ -1.54
SMC4-207ENST00000467263 PABPC1LQ4VXU2 614 aaKnown RBP5.46□□□□□ -1.54
SMC4-207ENST00000467263 NOMO2Q5JPE7 1267 aa5.46□□□□□ -1.54
SMC4-207ENST00000467263 MAPKAPK5Q8IW41 473 aa5.46□□□□□ -1.54
SMC4-207ENST00000467263 PRR18Q8N4B5 295 aa5.46□□□□□ -1.54
SMC4-207ENST00000467263 FITM2Q8N6M3 262 aa5.46□□□□□ -1.54
SMC4-207ENST00000467263 MARS2Q96GW9 593 aaKnown RBP5.46□□□□□ -1.54
SMC4-207ENST00000467263 RTFDC1Q9BY42 306 aaPredicted RBP5.46□□□□□ -1.54
SMC4-207ENST00000467263 CALCOCO1Q9P1Z2 691 aa5.46□□□□□ -1.54
SMC4-207ENST00000467263 ZNF180Q9UJW8 692 aa5.46□□□□□ -1.54
SMC4-207ENST00000467263 FRMD4BQ9Y2L6 1034 aa5.46□□□□□ -1.54
SMC4-207ENST00000467263 C1QL1O75973 258 aa5.45□□□□□ -1.54
SMC4-207ENST00000467263 HAUS5O94927 633 aa5.45□□□□□ -1.54
SMC4-207ENST00000467263 MTHFD1P11586 935 aaKnown RBP5.45□□□□□ -1.54
SMC4-207ENST00000467263 CKBP12277 381 aa5.45□□□□□ -1.54
SMC4-207ENST00000467263 MALP21145 153 aa5.45□□□□□ -1.54
SMC4-207ENST00000467263 FGFR4P22455 802 aa5.45□□□□□ -1.54
SMC4-207ENST00000467263 HSD11B2P80365 405 aa5.45□□□□□ -1.54
SMC4-207ENST00000467263 OCA2Q04671 838 aa5.45□□□□□ -1.54
SMC4-207ENST00000467263 SNAPC2Q13487 334 aa5.45□□□□□ -1.54
SMC4-207ENST00000467263 PGS1Q32NB8 556 aa5.45□□□□□ -1.54
SMC4-207ENST00000467263 FLYWCH1Q4VC44 716 aa5.45□□□□□ -1.54
SMC4-207ENST00000467263 B3GNTL1Q67FW5 361 aaPredicted RBP5.45□□□□□ -1.54
SMC4-207ENST00000467263 NLGN4YQ8NFZ3 816 aaPredicted RBP5.45□□□□□ -1.54
SMC4-207ENST00000467263 JPH3Q8WXH2 748 aaPredicted RBP5.45□□□□□ -1.54
SMC4-207ENST00000467263 Q96MF0 132 aa5.45□□□□□ -1.54
SMC4-207ENST00000467263 PACSIN1Q9BY11 444 aa5.45□□□□□ -1.54
SMC4-207ENST00000467263 RNPEPQ9H4A4 650 aa5.45□□□□□ -1.54
SMC4-207ENST00000467263 ZIM2Q9NZV7 527 aa5.45□□□□□ -1.54
SMC4-207ENST00000467263 RNF181Q9P0P0 153 aa5.45□□□□□ -1.54
SMC4-207ENST00000467263 PCDHA3Q9Y5H8 950 aa5.45□□□□□ -1.54
SMC4-207ENST00000467263 MAST3O60307 1309 aa5.45□□□□□ -1.54
SMC4-207ENST00000467263 CDKL5O76039 1030 aa5.44□□□□□ -1.54
SMC4-207ENST00000467263 AGFG2O95081 481 aa5.44□□□□□ -1.54
SMC4-207ENST00000467263 FTLP02792 175 aaPredicted RBP5.44□□□□□ -1.54
SMC4-207ENST00000467263 S100BP04271 92 aaPredicted RBP5.44□□□□□ -1.54
SMC4-207ENST00000467263 EPHB1P54762 984 aa5.44□□□□□ -1.54
SMC4-207ENST00000467263 SIM1P81133 766 aaPredicted RBP5.44□□□□□ -1.54
SMC4-207ENST00000467263 SLFN5Q08AF3 891 aa5.44□□□□□ -1.54
SMC4-207ENST00000467263 MPP3Q13368 585 aa5.44□□□□□ -1.54
SMC4-207ENST00000467263 ZNF267Q14586 743 aaPredicted RBP5.44□□□□□ -1.54
SMC4-207ENST00000467263 IFIT1BQ5T764 474 aaKnown RBP5.44□□□□□ -1.54
SMC4-207ENST00000467263 UTP14CQ5TAP6 766 aaKnown RBP5.44□□□□□ -1.54
SMC4-207ENST00000467263 TPH2Q8IWU9 490 aa5.44□□□□□ -1.54
SMC4-207ENST00000467263 ANKRD13AQ8IZ07 590 aa5.44□□□□□ -1.54
SMC4-207ENST00000467263 TMEM132CQ8N3T6 1108 aa5.44□□□□□ -1.54
SMC4-207ENST00000467263 C3orf20Q8ND61 904 aa5.44□□□□□ -1.54
SMC4-207ENST00000467263 RGMAQ96B86 450 aa5.44□□□□□ -1.54
SMC4-207ENST00000467263 LRGUKQ96M69 825 aa5.44□□□□□ -1.54
SMC4-207ENST00000467263 TLR10Q9BXR5 811 aa5.44□□□□□ -1.54
SMC4-207ENST00000467263 MAN1C1Q9NR34 630 aa5.44□□□□□ -1.54
SMC4-207ENST00000467263 SLC45A2Q9UMX9 530 aa5.44□□□□□ -1.54
SMC4-207ENST00000467263 E2F8A0AVK6 867 aa5.43□□□□□ -1.54
SMC4-207ENST00000467263 LRRC3CA6NJW4 275 aa5.43□□□□□ -1.54
SMC4-207ENST00000467263 F2RL2O00254 374 aa5.43□□□□□ -1.54
SMC4-207ENST00000467263 GPANK1O95872 356 aa5.43□□□□□ -1.54
SMC4-207ENST00000467263 IGLV2-14P01704 120 aa5.43□□□□□ -1.54
SMC4-207ENST00000467263 FCER1AP12319 257 aa5.43□□□□□ -1.54
SMC4-207ENST00000467263 VCAM1P19320 739 aa5.43□□□□□ -1.54
SMC4-207ENST00000467263 AKAP5P24588 427 aa5.43□□□□□ -1.54
SMC4-207ENST00000467263 SMARCA1P28370 1054 aa5.43□□□□□ -1.54
SMC4-207ENST00000467263 MAP2K6P52564 334 aa5.43□□□□□ -1.54
SMC4-207ENST00000467263 NOGQ13253 232 aa5.43□□□□□ -1.54
SMC4-207ENST00000467263 SLC4A10Q6U841 1118 aa5.43□□□□□ -1.54
SMC4-207ENST00000467263 GRAMD1CQ8IYS0 662 aa5.43□□□□□ -1.54
SMC4-207ENST00000467263 SH2D3CQ8N5H7 860 aa5.43□□□□□ -1.54
SMC4-207ENST00000467263 IL17RDQ8NFM7 739 aa5.43□□□□□ -1.54
SMC4-207ENST00000467263 NUP133Q8WUM0 1156 aa5.43□□□□□ -1.54
SMC4-207ENST00000467263 RNF31Q96EP0 1072 aa5.43□□□□□ -1.54
SMC4-207ENST00000467263 MVB12AQ96EY5 273 aa5.43□□□□□ -1.54
SMC4-207ENST00000467263 NUP88Q99567 741 aaPredicted RBP5.43□□□□□ -1.54
SMC4-207ENST00000467263 ALOXE3Q9BYJ1 711 aa5.43□□□□□ -1.54
SMC4-207ENST00000467263 CDH19Q9H159 772 aa5.43□□□□□ -1.54
SMC4-207ENST00000467263 SLAMF7Q9NQ25 335 aa5.43□□□□□ -1.54
SMC4-207ENST00000467263 JKAMPQ9P055 326 aa5.43□□□□□ -1.54
SMC4-207ENST00000467263 HSFX1Q9UBD0 423 aa5.43□□□□□ -1.54
SMC4-207ENST00000467263 ABCF2Q9UG63 623 aa5.43□□□□□ -1.54
SMC4-207ENST00000467263 TLK1Q9UKI8 766 aa5.43□□□□□ -1.54
SMC4-207ENST00000467263 POLHQ9Y253 713 aa5.43□□□□□ -1.54
SMC4-207ENST00000467263 NT5C1B-RDH14C9J2C7 533 aa5.42□□□□□ -1.54
SMC4-207ENST00000467263 AP1G1O43747 822 aa5.42□□□□□ -1.54
SMC4-207ENST00000467263 SLC43A1O75387 559 aa5.42□□□□□ -1.54
SMC4-207ENST00000467263 ERN1O75460 977 aaKnown RBP5.42□□□□□ -1.54
SMC4-207ENST00000467263 ZNF169Q14929 603 aaPredicted RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms