RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 MATN2O00339 956 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 VPS4BO75351 444 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 FGF18O76093 207 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 AGFG2O95081 481 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 NDST3O95803 873 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 FGAP02671 866 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 MTHFD1P11586 935 aaKnown RBP4.95□□□□□ -1.62
VPS13A-209ENST00000467124 MYL4P12829 197 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 FGFR2P21802 821 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 RENBPP51606 427 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 ARFIP2P53365 341 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 SLURP1P55000 103 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 UCP3P55916 312 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 RAC3P60763 192 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 PTH1RQ03431 593 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 DUSP8Q13202 625 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 MRPL49Q13405 166 aaKnown RBP4.95□□□□□ -1.62
VPS13A-209ENST00000467124 BIRC3Q13489 604 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 PDCD2Q16342 344 aaPredicted RBP4.95□□□□□ -1.62
VPS13A-209ENST00000467124 TMEM95Q3KNT9 176 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 ZNF648Q5T619 568 aaPredicted RBP4.95□□□□□ -1.62
VPS13A-209ENST00000467124 LDHAL6AQ6ZMR3 332 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 LGI4Q8N135 537 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 NKAPQ8N5F7 415 aaKnown RBP4.95□□□□□ -1.62
VPS13A-209ENST00000467124 DNAJC5GQ8N7S2 189 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 ATG16L2Q8NAA4 619 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 ZNF527Q8NB42 609 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 SLC17A8Q8NDX2 589 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 SHCBP1Q8NEM2 672 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 TBC1D15Q8TC07 691 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 KBTBD7Q8WVZ9 684 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 RAPGEF4Q8WZA2 1011 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 SUCLG2Q96I99 432 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 SNX22Q96L94 193 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 SELENOOQ9BVL4 669 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 TTLL2Q9BWV7 592 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 IMPG2Q9BZV3 1241 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 ENKD1Q9H0I2 346 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 SPON1Q9HCB6 807 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 GNL3LQ9NVN8 582 aaKnown RBP4.95□□□□□ -1.62
VPS13A-209ENST00000467124 LRFN1Q9P244 771 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 GRHPRQ9UBQ7 328 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 HDAC9Q9UKV0 1011 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 PNMA2Q9UL42 364 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 MAN2B2Q9Y2E5 1009 aa4.95□□□□□ -1.62
VPS13A-209ENST00000467124 A0A1W2PPC4 97 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 TRIM43BA6NCK2 446 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 AQP12BA6NM10 295 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 ADAMTS3O15072 1205 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 NOBOXO60393 691 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 SLC43A1O75387 559 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 DNAJB5O75953 348 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 PRSS23O95084 383 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 KIF20AO95235 890 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 ITGB1P05556 798 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 GRPP07492 148 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 TYRP1P17643 537 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 CHRM3P20309 590 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 EEF1GP26641 437 aaKnown RBP4.94□□□□□ -1.62
VPS13A-209ENST00000467124 PDIA3P30101 505 aaKnown RBP4.94□□□□□ -1.62
VPS13A-209ENST00000467124 TXKP42681 527 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 KCNC1P48547 511 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 CARSP49589 748 aaKnown RBP4.94□□□□□ -1.62
VPS13A-209ENST00000467124 KIF22Q14807 665 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 DCAF12L1Q5VU92 463 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 OTUD7BQ6GQQ9 843 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 SEM1Q6ZVN7 128 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 MICU3Q86XE3 530 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 SMAP1Q8IYB5 467 aaPredicted RBP4.94□□□□□ -1.62
VPS13A-209ENST00000467124 GPR135Q8IZ08 494 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 FAM9AQ8IZU1 332 aaPredicted RBP4.94□□□□□ -1.62
VPS13A-209ENST00000467124 NSUN7Q8NE18 718 aaKnown RBP4.94□□□□□ -1.62
VPS13A-209ENST00000467124 TMIEQ8NEW7 156 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 IL17RDQ8NFM7 739 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 OR10H5Q8NGA6 315 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 IPO4Q8TEX9 1081 aaKnown RBP4.94□□□□□ -1.62
VPS13A-209ENST00000467124 TRIM43Q96BQ3 446 aaPredicted RBP4.94□□□□□ -1.62
VPS13A-209ENST00000467124 IQCDQ96DY2 449 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 TCF25Q9BQ70 676 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 BRIP1Q9BX63 1249 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 PRDM16Q9HAZ2 1276 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 OBP2BQ9NPH6 170 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 CFAP97Q9P2B7 532 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 SLC39A10Q9ULF5 831 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 OAZ3Q9UMX2 235 aa4.94□□□□□ -1.62
VPS13A-209ENST00000467124 B5MCH6 92 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 PYCARD-AS1I3L0S3 204 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 FOXN3O00409 490 aaPredicted RBP4.93□□□□□ -1.62
VPS13A-209ENST00000467124 HOXA3O43365 443 aaPredicted RBP4.93□□□□□ -1.62
VPS13A-209ENST00000467124 B4GALT3O60512 393 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 CDC14BO60729 498 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 EIF5BO60841 1220 aaKnown RBP4.93□□□□□ -1.62
VPS13A-209ENST00000467124 RASSF9O75901 435 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 MT-ND5P03915 603 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 GNAI2P04899 355 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 RARBP10826 455 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 IL1R1P14778 569 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 RPL17P18621 184 aaKnown RBP4.93□□□□□ -1.62
VPS13A-209ENST00000467124 ALDH9A1P49189 494 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 SLC11A2P49281 568 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms