RNA–Protein interactions for RNA: ENST00000465339.5

COL28A1-206, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 3

Gene COL28A1, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-206ENST00000465339 GOLGA5Q8TBA6 731 aa14.12□□□□□ -0.15
COL28A1-206ENST00000465339 CACTINQ8WUQ7 758 aaKnown RBP14.12□□□□□ -0.15
COL28A1-206ENST00000465339 RHOBTB2Q9BYZ6 727 aa14.12□□□□□ -0.15
COL28A1-206ENST00000465339 MAN1C1Q9NR34 630 aa14.12□□□□□ -0.15
COL28A1-206ENST00000465339 DPP3Q9NY33 737 aa14.12□□□□□ -0.15
COL28A1-206ENST00000465339 RBAKQ9NYW8 714 aaPredicted RBP14.12□□□□□ -0.15
COL28A1-206ENST00000465339 ANO9A1A5B4 782 aa14.11□□□□□ -0.15
COL28A1-206ENST00000465339 GOLGA8IPA6NC78 632 aa14.11□□□□□ -0.15
COL28A1-206ENST00000465339 GOLGA8JA6NMD2 632 aa14.11□□□□□ -0.15
COL28A1-206ENST00000465339 M0QZQ0 153 aa14.11□□□□□ -0.15
COL28A1-206ENST00000465339 PIRO00625 290 aa14.11□□□□□ -0.15
COL28A1-206ENST00000465339 SPATA31D3P0C874 917 aa14.11□□□□□ -0.15
COL28A1-206ENST00000465339 OR1D2P34982 312 aa14.11□□□□□ -0.15
COL28A1-206ENST00000465339 AARSP49588 968 aaKnown RBP eCLIP14.11□□□□□ -0.15
COL28A1-206ENST00000465339 DPYDQ12882 1025 aa14.11□□□□□ -0.15
COL28A1-206ENST00000465339 STK4Q13043 487 aa14.11□□□□□ -0.15
COL28A1-206ENST00000465339 MRPL58Q14197 206 aaKnown RBP14.11□□□□□ -0.15
COL28A1-206ENST00000465339 SURF1Q15526 300 aa14.11□□□□□ -0.15
COL28A1-206ENST00000465339 VARS2Q5ST30 1063 aaKnown RBP14.11□□□□□ -0.15
COL28A1-206ENST00000465339 SPATA31D4Q6ZUB0 917 aa14.11□□□□□ -0.15
COL28A1-206ENST00000465339 RTL10Q7L3V2 364 aa14.11□□□□□ -0.15
COL28A1-206ENST00000465339 GPR149Q86SP6 731 aa14.11□□□□□ -0.15
COL28A1-206ENST00000465339 NELFCDQ8IXH7 590 aa14.11□□□□□ -0.15
COL28A1-206ENST00000465339 C12orf56Q8IXR9 622 aa14.11□□□□□ -0.15
COL28A1-206ENST00000465339 FMR1NBQ8N0W7 255 aaPredicted RBP14.11□□□□□ -0.15
COL28A1-206ENST00000465339 KREMEN2Q8NCW0 462 aa14.11□□□□□ -0.15
COL28A1-206ENST00000465339 ZSWIM2Q8NEG5 633 aa14.11□□□□□ -0.15
COL28A1-206ENST00000465339 NOC3LQ8WTT2 800 aaKnown RBP14.11□□□□□ -0.15
COL28A1-206ENST00000465339 OXCT2Q9BYC2 517 aaPredicted RBP14.11□□□□□ -0.15
COL28A1-206ENST00000465339 AGPAT3Q9NRZ7 376 aa14.11□□□□□ -0.15
COL28A1-206ENST00000465339 HSPBP1Q9NZL4 362 aa14.11□□□□□ -0.15
COL28A1-206ENST00000465339 CHMP5Q9NZZ3 219 aa14.11□□□□□ -0.15
COL28A1-206ENST00000465339 VCANP13611 3396 aa14.1□□□□□ -0.15
COL28A1-206ENST00000465339 CCDC195A0A1B0GUA6 201 aa14.1□□□□□ -0.15
COL28A1-206ENST00000465339 ARHGEF37A1IGU5 675 aa14.1□□□□□ -0.15
COL28A1-206ENST00000465339 RHOBTB3O94955 611 aa14.1□□□□□ -0.15
COL28A1-206ENST00000465339 KIF20AO95235 890 aa14.1□□□□□ -0.15
COL28A1-206ENST00000465339 PAPLNO95428 1278 aa14.1□□□□□ -0.15
COL28A1-206ENST00000465339 GUCY2FP51841 1108 aa14.1□□□□□ -0.15
COL28A1-206ENST00000465339 LILRA4P59901 499 aa14.1□□□□□ -0.15
COL28A1-206ENST00000465339 FAM160A1Q05DH4 1040 aa14.1□□□□□ -0.15
COL28A1-206ENST00000465339 KCNB1Q14721 858 aa14.1□□□□□ -0.15
COL28A1-206ENST00000465339 UVSSAQ2YD98 709 aa14.1□□□□□ -0.15
COL28A1-206ENST00000465339 SLC8B1Q6J4K2 584 aa14.1□□□□□ -0.15
COL28A1-206ENST00000465339 TMC5Q6UXY8 1006 aa14.1□□□□□ -0.15
COL28A1-206ENST00000465339 DSTYKQ6XUX3 929 aa14.1□□□□□ -0.15
COL28A1-206ENST00000465339 EFCAB13Q8IY85 973 aa14.1□□□□□ -0.15
COL28A1-206ENST00000465339 XXYLT1Q8NBI6 393 aa14.1□□□□□ -0.15
COL28A1-206ENST00000465339 ENGASEQ8NFI3 743 aa14.1□□□□□ -0.15
COL28A1-206ENST00000465339 ZNF461Q8TAF7 563 aa14.1□□□□□ -0.15
COL28A1-206ENST00000465339 CD320Q9NPF0 282 aa14.1□□□□□ -0.15
COL28A1-206ENST00000465339 ZDHHC7Q9NXF8 308 aa14.1□□□□□ -0.15
COL28A1-206ENST00000465339 CDY1Q9Y6F8 540 aa14.1□□□□□ -0.15
COL28A1-206ENST00000465339 SCN1AP35498 2009 aa14.1□□□□□ -0.15
COL28A1-206ENST00000465339 C2orf16Q68DN1 1984 aa14.09□□□□□ -0.15
COL28A1-206ENST00000465339 LOC730098B7Z3J9 87 aa14.09□□□□□ -0.15
COL28A1-206ENST00000465339 CLIC2O15247 247 aa14.09□□□□□ -0.15
COL28A1-206ENST00000465339 ADAM12O43184 909 aa14.09□□□□□ -0.15
COL28A1-206ENST00000465339 TBC1D4O60343 1298 aa14.09□□□□□ -0.15
COL28A1-206ENST00000465339 ZMYND10O75800 440 aa14.09□□□□□ -0.15
COL28A1-206ENST00000465339 OAZ2O95190 189 aa14.09□□□□□ -0.15
COL28A1-206ENST00000465339 PNPLA4P41247 253 aa14.09□□□□□ -0.15
COL28A1-206ENST00000465339 TFAMQ00059 246 aaKnown RBP14.09□□□□□ -0.15
COL28A1-206ENST00000465339 SNW1Q13573 536 aaKnown RBP14.09□□□□□ -0.15
COL28A1-206ENST00000465339 CTXN3Q4LDR2 81 aa14.09□□□□□ -0.15
COL28A1-206ENST00000465339 RSPO2Q6UXX9 243 aaPredicted RBP14.09□□□□□ -0.15
COL28A1-206ENST00000465339 USP37Q86T82 979 aa14.09□□□□□ -0.15
COL28A1-206ENST00000465339 KIAA0895Q8NCT3 520 aa14.09□□□□□ -0.15
COL28A1-206ENST00000465339 TMEM174Q8WUU8 243 aa14.09□□□□□ -0.15
COL28A1-206ENST00000465339 TIGD1Q96MW7 591 aa14.09□□□□□ -0.15
COL28A1-206ENST00000465339 PDE11AQ9HCR9 933 aa14.09□□□□□ -0.15
COL28A1-206ENST00000465339 HOOK1Q9UJC3 728 aaKnown RBP14.09□□□□□ -0.15
COL28A1-206ENST00000465339 FBXW11Q9UKB1 542 aa14.09□□□□□ -0.15
COL28A1-206ENST00000465339 NR2E1Q9Y466 385 aa14.09□□□□□ -0.15
COL28A1-206ENST00000465339 C2orf72A6NCS6 295 aa14.08□□□□□ -0.16
COL28A1-206ENST00000465339 PDXKO00764 312 aa14.08□□□□□ -0.16
COL28A1-206ENST00000465339 PPEF2O14830 753 aa14.08□□□□□ -0.16
COL28A1-206ENST00000465339 ABLIM3O94929 683 aa14.08□□□□□ -0.16
COL28A1-206ENST00000465339 HNRNPA1P09651 372 aaKnown RBP eCLIP14.08□□□□□ -0.16
COL28A1-206ENST00000465339 TYMPP19971 482 aa14.08□□□□□ -0.16
COL28A1-206ENST00000465339 TAF6P49848 677 aa14.08□□□□□ -0.16
COL28A1-206ENST00000465339 WNT7BP56706 349 aa14.08□□□□□ -0.16
COL28A1-206ENST00000465339 YWHAHQ04917 246 aaPredicted RBP14.08□□□□□ -0.16
COL28A1-206ENST00000465339 SNRNP35Q16560 246 aaKnown RBP14.08□□□□□ -0.16
COL28A1-206ENST00000465339 LIN9Q5TKA1 542 aa14.08□□□□□ -0.16
COL28A1-206ENST00000465339 TPGS2Q68CL5 300 aa14.08□□□□□ -0.16
COL28A1-206ENST00000465339 ZNF280DQ6N043 979 aa14.08□□□□□ -0.16
COL28A1-206ENST00000465339 CCDC149Q6ZUS6 474 aa14.08□□□□□ -0.16
COL28A1-206ENST00000465339 CBWD2Q8IUF1 395 aa14.08□□□□□ -0.16
COL28A1-206ENST00000465339 TMEM130Q8N3G9 435 aa14.08□□□□□ -0.16
COL28A1-206ENST00000465339 RDH13Q8NBN7 331 aa14.08□□□□□ -0.16
COL28A1-206ENST00000465339 RPGRIP1Q96KN7 1286 aa14.08□□□□□ -0.16
COL28A1-206ENST00000465339 SENP8Q96LD8 212 aa14.08□□□□□ -0.16
COL28A1-206ENST00000465339 PRKD2Q9BZL6 878 aa14.08□□□□□ -0.16
COL28A1-206ENST00000465339 POMKQ9H5K3 350 aa14.08□□□□□ -0.16
COL28A1-206ENST00000465339 FBXL5Q9UKA1 691 aa14.08□□□□□ -0.16
COL28A1-206ENST00000465339 ITGA11Q9UKX5 1188 aa14.08□□□□□ -0.16
COL28A1-206ENST00000465339 MAFFQ9ULX9 164 aa14.08□□□□□ -0.16
COL28A1-206ENST00000465339 KPNA7A9QM74 516 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 SPTLC1O15269 473 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms