RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 B3GALT2O43825 422 aa5.19□□□□□ -1.58
CLK1-208ENST00000464454 ABHD16AO95870 558 aa5.19□□□□□ -1.58
CLK1-208ENST00000464454 ZBED1O96006 694 aa5.19□□□□□ -1.58
CLK1-208ENST00000464454 HRGP04196 525 aa5.19□□□□□ -1.58
CLK1-208ENST00000464454 HTR1BP28222 390 aa5.19□□□□□ -1.58
CLK1-208ENST00000464454 PIK3CGP48736 1102 aa5.19□□□□□ -1.58
CLK1-208ENST00000464454 USP14P54578 494 aa5.19□□□□□ -1.58
CLK1-208ENST00000464454 FAM189BP81408 668 aa5.19□□□□□ -1.58
CLK1-208ENST00000464454 HDAC1Q13547 482 aaPredicted RBP5.19□□□□□ -1.58
CLK1-208ENST00000464454 LLGL1Q15334 1064 aa5.19□□□□□ -1.58
CLK1-208ENST00000464454 FLYWCH1Q4VC44 716 aa5.19□□□□□ -1.58
CLK1-208ENST00000464454 CCDC93Q567U6 631 aa5.19□□□□□ -1.58
CLK1-208ENST00000464454 FNDC7Q5VTL7 733 aa5.19□□□□□ -1.58
CLK1-208ENST00000464454 KRTAP5-3Q6L8H2 238 aa5.19□□□□□ -1.58
CLK1-208ENST00000464454 KCNV1Q6PIU1 500 aa5.19□□□□□ -1.58
CLK1-208ENST00000464454 RHOUQ7L0Q8 258 aa5.19□□□□□ -1.58
CLK1-208ENST00000464454 PDSS2Q86YH6 399 aa5.19□□□□□ -1.58
CLK1-208ENST00000464454 FAM43AQ8N2R8 423 aa5.19□□□□□ -1.58
CLK1-208ENST00000464454 MMRN2Q9H8L6 949 aa5.19□□□□□ -1.58
CLK1-208ENST00000464454 BRD9Q9H8M2 597 aa5.19□□□□□ -1.58
CLK1-208ENST00000464454 ABCF2Q9UG63 623 aa5.19□□□□□ -1.58
CLK1-208ENST00000464454 KCNE5Q9UJ90 142 aa5.19□□□□□ -1.58
CLK1-208ENST00000464454 STXBP5LQ9Y2K9 1186 aa5.19□□□□□ -1.58
CLK1-208ENST00000464454 PCDHA3Q9Y5H8 950 aa5.19□□□□□ -1.58
CLK1-208ENST00000464454 NOX1Q9Y5S8 564 aa5.19□□□□□ -1.58
CLK1-208ENST00000464454 LRRC14BA6NHZ5 514 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 TMEM200CA6NKL6 621 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 MARCH11A6NNE9 402 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 FAM227AF5H4B4 570 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 AGFG2O95081 481 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 NDUFA10O95299 355 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 GPANK1O95872 356 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 SBK3P0C264 359 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 NBPF7P0C2Y1 421 aaPredicted RBP5.18□□□□□ -1.58
CLK1-208ENST00000464454 TYRP14679 529 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 PHKG2P15735 406 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 FGFR4P22455 802 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 NR4A1P22736 598 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 DDX6P26196 483 aaKnown RBP eCLIP5.18□□□□□ -1.58
CLK1-208ENST00000464454 PRDX5P30044 214 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 SLC6A4P31645 630 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 OCA2Q04671 838 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 PIGFQ07326 219 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 PTPAQ15257 358 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 SAFBQ15424 915 aaKnown RBP eCLIP5.18□□□□□ -1.58
CLK1-208ENST00000464454 ANO6Q4KMQ2 910 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 COBLL1Q53SF7 1204 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 UTP14CQ5TAP6 766 aaKnown RBP5.18□□□□□ -1.58
CLK1-208ENST00000464454 CYB5RLQ6IPT4 315 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 NPNTQ6UXI9 565 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 DAAM2Q86T65 1068 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 CPEB3Q8NE35 698 aaKnown RBP5.18□□□□□ -1.58
CLK1-208ENST00000464454 PJA1Q8NG27 643 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 KLHDC4Q8TBB5 520 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 PROKR1Q8TCW9 393 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 FBXO41Q8TF61 875 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 SIK2Q9H0K1 926 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 DDX21Q9NR30 783 aaKnown RBP eCLIP5.18□□□□□ -1.58
CLK1-208ENST00000464454 ZDHHC8Q9ULC8 765 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 NEU2Q9Y3R4 380 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 NR2E3Q9Y5X4 410 aa5.18□□□□□ -1.58
CLK1-208ENST00000464454 A6NNZ2 444 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 CYR61O00622 381 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 TPP1O14773 563 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 ERN1O75460 977 aaKnown RBP5.17□□□□□ -1.58
CLK1-208ENST00000464454 CDKL5O76039 1030 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 CHEK2O96017 543 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 FOSP01100 380 aaPredicted RBP5.17□□□□□ -1.58
CLK1-208ENST00000464454 RHCEP18577 417 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 AGFG1P52594 562 aaKnown RBP5.17□□□□□ -1.58
CLK1-208ENST00000464454 PTTG1IPP53801 180 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 NOMO3P69849 1222 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 GUCY1B3Q02153 619 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 RHDQ02161 417 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 ZNF844Q08AG5 666 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 UBE4AQ14139 1066 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 GALEQ14376 348 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 NOMO2Q5JPE7 1267 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 DARS2Q6PI48 645 aaKnown RBP5.17□□□□□ -1.58
CLK1-208ENST00000464454 CCDC149Q6ZUS6 474 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 MRGPREQ86SM8 312 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 FAM90A1Q86YD7 464 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 ARHGEF19Q8IW93 802 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 KIAA0319LQ8IZA0 1049 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 Q8N1X5 172 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 TMEM132CQ8N3T6 1108 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 BRIX1Q8TDN6 353 aaKnown RBP5.17□□□□□ -1.58
CLK1-208ENST00000464454 SCAMP4Q969E2 229 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 MARS2Q96GW9 593 aaKnown RBP5.17□□□□□ -1.58
CLK1-208ENST00000464454 ZSWIM1Q9BR11 485 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 LRFN3Q9BTN0 628 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 TEX101Q9BY14 249 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 PNPOQ9NVS9 261 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 SRRDQ9UH36 339 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 L1RE1Q9UN81 338 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 MTO1Q9Y2Z2 717 aaKnown RBP5.17□□□□□ -1.58
CLK1-208ENST00000464454 HS3ST3A1Q9Y663 406 aa5.17□□□□□ -1.58
CLK1-208ENST00000464454 A0A088AWK7 358 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 ANO9A1A5B4 782 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 CAPN8A6NHC0 703 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms