RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 M0QZQ0 153 aa18.4■□□□□ 0.54
VPS52-215ENST00000464425 EXOC3O60645 756 aa18.4■□□□□ 0.54
VPS52-215ENST00000464425 RFPL2O75678 378 aa18.4■□□□□ 0.54
VPS52-215ENST00000464425 KIF20AO95235 890 aa18.4■□□□□ 0.54
VPS52-215ENST00000464425 AARSP49588 968 aaKnown RBP eCLIP18.4■□□□□ 0.54
VPS52-215ENST00000464425 ITIH3Q06033 890 aa18.4■□□□□ 0.54
VPS52-215ENST00000464425 CBX2Q14781 532 aaPredicted RBP18.4■□□□□ 0.54
VPS52-215ENST00000464425 KLHL40Q2TBA0 621 aa18.4■□□□□ 0.54
VPS52-215ENST00000464425 COBLL1Q53SF7 1204 aa18.4■□□□□ 0.54
VPS52-215ENST00000464425 C12orf56Q8IXR9 622 aa18.4■□□□□ 0.54
VPS52-215ENST00000464425 SMYD4Q8IYR2 804 aaPredicted RBP18.4■□□□□ 0.54
VPS52-215ENST00000464425 CSGALNACT2Q8N6G5 542 aa18.4■□□□□ 0.54
VPS52-215ENST00000464425 TRIML1Q8N9V2 468 aa18.4■□□□□ 0.54
VPS52-215ENST00000464425 KREMEN2Q8NCW0 462 aa18.4■□□□□ 0.54
VPS52-215ENST00000464425 CCDC127Q96BQ5 260 aa18.4■□□□□ 0.54
VPS52-215ENST00000464425 SENP8Q96LD8 212 aa18.4■□□□□ 0.54
VPS52-215ENST00000464425 SFXN1Q9H9B4 322 aa18.4■□□□□ 0.54
VPS52-215ENST00000464425 CD320Q9NPF0 282 aa18.4■□□□□ 0.54
VPS52-215ENST00000464425 NCOR1O75376 2440 aa18.39■□□□□ 0.53
VPS52-215ENST00000464425 CUL9Q8IWT3 2517 aa18.39■□□□□ 0.53
VPS52-215ENST00000464425 H7C4K7 107 aa18.39■□□□□ 0.53
VPS52-215ENST00000464425 PDXKO00764 312 aa18.39■□□□□ 0.53
VPS52-215ENST00000464425 ITGB3P05106 788 aa18.39■□□□□ 0.53
VPS52-215ENST00000464425 KRT19P08727 400 aa18.39■□□□□ 0.53
VPS52-215ENST00000464425 DLATP10515 647 aaKnown RBP18.39■□□□□ 0.53
VPS52-215ENST00000464425 POLR2BP30876 1174 aaKnown RBP18.39■□□□□ 0.53
VPS52-215ENST00000464425 SSTR3P32745 418 aaPredicted RBP18.39■□□□□ 0.53
VPS52-215ENST00000464425 ZP2Q05996 745 aa18.39■□□□□ 0.53
VPS52-215ENST00000464425 CYP24A1Q07973 514 aa18.39■□□□□ 0.53
VPS52-215ENST00000464425 RAB33AQ14088 237 aa18.39■□□□□ 0.53
VPS52-215ENST00000464425 MRPL58Q14197 206 aaKnown RBP18.39■□□□□ 0.53
VPS52-215ENST00000464425 SURF1Q15526 300 aa18.39■□□□□ 0.53
VPS52-215ENST00000464425 CTXN3Q4LDR2 81 aa18.39■□□□□ 0.53
VPS52-215ENST00000464425 ATAT1Q5SQI0 421 aa18.39■□□□□ 0.53
VPS52-215ENST00000464425 ELMSAN1Q6PJG2 1045 aa18.39■□□□□ 0.53
VPS52-215ENST00000464425 RBM43Q6ZSC3 357 aaKnown RBP18.39■□□□□ 0.53
VPS52-215ENST00000464425 ADHFE1Q8IWW8 467 aa18.39■□□□□ 0.53
VPS52-215ENST00000464425 C1orf127Q8N9H9 656 aa18.39■□□□□ 0.53
VPS52-215ENST00000464425 OR5B17Q8NGF7 314 aa18.39■□□□□ 0.53
VPS52-215ENST00000464425 POP1Q99575 1024 aaKnown RBP18.39■□□□□ 0.53
VPS52-215ENST00000464425 MTMR12Q9C0I1 747 aa18.39■□□□□ 0.53
VPS52-215ENST00000464425 PLEKHA4Q9H4M7 779 aa18.39■□□□□ 0.53
VPS52-215ENST00000464425 INTS13Q9NVM9 706 aa18.39■□□□□ 0.53
VPS52-215ENST00000464425 PRKAG3Q9UGI9 489 aa18.39■□□□□ 0.53
VPS52-215ENST00000464425 DPP7Q9UHL4 492 aa18.39■□□□□ 0.53
VPS52-215ENST00000464425 MAN1B1Q9UKM7 699 aa18.39■□□□□ 0.53
VPS52-215ENST00000464425 AGAP1Q9UPQ3 857 aa18.39■□□□□ 0.53
VPS52-215ENST00000464425 PTPRJQ12913 1337 aa18.39■□□□□ 0.53
VPS52-215ENST00000464425 PLXNA3P51805 1871 aa18.38■□□□□ 0.53
VPS52-215ENST00000464425 CCDC195A0A1B0GUA6 201 aa18.38■□□□□ 0.53
VPS52-215ENST00000464425 NR3C1P04150 777 aa18.38■□□□□ 0.53
VPS52-215ENST00000464425 TMEM191BP0C7N4 346 aa18.38■□□□□ 0.53
VPS52-215ENST00000464425 TAF6P49848 677 aa18.38■□□□□ 0.53
VPS52-215ENST00000464425 YWHAHQ04917 246 aaPredicted RBP18.38■□□□□ 0.53
VPS52-215ENST00000464425 MORC3Q14149 939 aa18.38■□□□□ 0.53
VPS52-215ENST00000464425 NFKBIBQ15653 356 aa18.38■□□□□ 0.53
VPS52-215ENST00000464425 CCDC183Q5T5S1 534 aa18.38■□□□□ 0.53
VPS52-215ENST00000464425 USP37Q86T82 979 aa18.38■□□□□ 0.53
VPS52-215ENST00000464425 GJD3Q8N144 294 aa18.38■□□□□ 0.53
VPS52-215ENST00000464425 GUF1Q8N442 669 aaKnown RBP18.38■□□□□ 0.53
VPS52-215ENST00000464425 SYAP1Q96A49 352 aaPredicted RBP18.38■□□□□ 0.53
VPS52-215ENST00000464425 ANKRD36BP1Q96IX9 119 aa18.38■□□□□ 0.53
VPS52-215ENST00000464425 RPGRIP1Q96KN7 1286 aa18.38■□□□□ 0.53
VPS52-215ENST00000464425 RIPOR3Q96MK2 946 aa18.38■□□□□ 0.53
VPS52-215ENST00000464425 FNBP1Q96RU3 617 aa18.38■□□□□ 0.53
VPS52-215ENST00000464425 DMAC2Q9NW81 257 aa18.38■□□□□ 0.53
VPS52-215ENST00000464425 FBXL5Q9UKA1 691 aa18.38■□□□□ 0.53
VPS52-215ENST00000464425 TNFRSF10AO00220 468 aa18.37■□□□□ 0.53
VPS52-215ENST00000464425 CYB561D2O14569 222 aa18.37■□□□□ 0.53
VPS52-215ENST00000464425 CALUO43852 315 aaPredicted RBP18.37■□□□□ 0.53
VPS52-215ENST00000464425 TBC1D4O60343 1298 aa18.37■□□□□ 0.53
VPS52-215ENST00000464425 C1RP00736 705 aa18.37■□□□□ 0.53
VPS52-215ENST00000464425 TNNC2P02585 160 aa18.37■□□□□ 0.53
VPS52-215ENST00000464425 ODC1P11926 461 aa18.37■□□□□ 0.53
VPS52-215ENST00000464425 TNNI1P19237 187 aa18.37■□□□□ 0.53
VPS52-215ENST00000464425 SP100P23497 879 aaPredicted RBP18.37■□□□□ 0.53
VPS52-215ENST00000464425 ROR1Q01973 937 aa18.37■□□□□ 0.53
VPS52-215ENST00000464425 PSMD6Q15008 389 aa18.37■□□□□ 0.53
VPS52-215ENST00000464425 DUOXA2Q1HG44 320 aa18.37■□□□□ 0.53
VPS52-215ENST00000464425 ISM2Q6H9L7 571 aa18.37■□□□□ 0.53
VPS52-215ENST00000464425 SLC8B1Q6J4K2 584 aa18.37■□□□□ 0.53
VPS52-215ENST00000464425 ZNF280DQ6N043 979 aa18.37■□□□□ 0.53
VPS52-215ENST00000464425 GPR149Q86SP6 731 aa18.37■□□□□ 0.53
VPS52-215ENST00000464425 HDAC7Q8WUI4 952 aa18.37■□□□□ 0.53
VPS52-215ENST00000464425 MFSD14AQ96MC6 490 aa18.37■□□□□ 0.53
VPS52-215ENST00000464425 PHF7Q9BWX1 381 aaPredicted RBP18.37■□□□□ 0.53
VPS52-215ENST00000464425 POMKQ9H5K3 350 aa18.37■□□□□ 0.53
VPS52-215ENST00000464425 SIX4Q9UIU6 781 aa18.37■□□□□ 0.53
VPS52-215ENST00000464425 FBXW11Q9UKB1 542 aa18.37■□□□□ 0.53
VPS52-215ENST00000464425 ITGA11Q9UKX5 1188 aa18.37■□□□□ 0.53
VPS52-215ENST00000464425 SCN1AP35498 2009 aa18.37■□□□□ 0.53
VPS52-215ENST00000464425 KPNA7A9QM74 516 aa18.36■□□□□ 0.53
VPS52-215ENST00000464425 ZMYND10O75800 440 aa18.36■□□□□ 0.53
VPS52-215ENST00000464425 OAZ2O95190 189 aa18.36■□□□□ 0.53
VPS52-215ENST00000464425 TYMPP19971 482 aa18.36■□□□□ 0.53
VPS52-215ENST00000464425 BMP6P22004 513 aa18.36■□□□□ 0.53
VPS52-215ENST00000464425 PAX3P23760 479 aa18.36■□□□□ 0.53
VPS52-215ENST00000464425 PPP1R2P41236 205 aa18.36■□□□□ 0.53
VPS52-215ENST00000464425 MTHFRP42898 656 aa18.36■□□□□ 0.53
VPS52-215ENST00000464425 CASP4P49662 377 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms