RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 HEATR6Q6AI08 1181 aaKnown RBP17.15■□□□□ 0.34
SND1-203ENST00000463020 MFSD6LQ8IWD5 586 aa17.15■□□□□ 0.34
SND1-203ENST00000463020 TTC9BQ8N6N2 239 aa17.15■□□□□ 0.34
SND1-203ENST00000463020 ERMNQ8TAM6 284 aa17.15■□□□□ 0.34
SND1-203ENST00000463020 ZFYVE19Q96K21 471 aa17.15■□□□□ 0.34
SND1-203ENST00000463020 TRPV5Q9NQA5 729 aa17.15■□□□□ 0.34
SND1-203ENST00000463020 SEMA4GQ9NTN9 838 aa17.15■□□□□ 0.34
SND1-203ENST00000463020 AFF4Q9UHB7 1163 aaKnown RBP17.15■□□□□ 0.34
SND1-203ENST00000463020 NUB1Q9Y5A7 615 aa17.15■□□□□ 0.34
SND1-203ENST00000463020 ZZEF1O43149 2961 aa17.14■□□□□ 0.33
SND1-203ENST00000463020 PDCD11Q14690 1871 aaKnown RBP17.14■□□□□ 0.33
SND1-203ENST00000463020 A0A1W2PRU2 124 aa17.14■□□□□ 0.33
SND1-203ENST00000463020 SFI1A8K8P3 1242 aa17.14■□□□□ 0.33
SND1-203ENST00000463020 ZNF197O14709 1029 aa17.14■□□□□ 0.33
SND1-203ENST00000463020 SLC30A4O14863 429 aa17.14■□□□□ 0.33
SND1-203ENST00000463020 ZNF263O14978 683 aa17.14■□□□□ 0.33
SND1-203ENST00000463020 SOAT2O75908 522 aa17.14■□□□□ 0.33
SND1-203ENST00000463020 RETP07949 1114 aa17.14■□□□□ 0.33
SND1-203ENST00000463020 MCF2P10911 925 aa17.14■□□□□ 0.33
SND1-203ENST00000463020 SDHBP21912 280 aa17.14■□□□□ 0.33
SND1-203ENST00000463020 CDC25AP30304 524 aa17.14■□□□□ 0.33
SND1-203ENST00000463020 MCM4P33991 863 aa17.14■□□□□ 0.33
SND1-203ENST00000463020 CCR3P51677 355 aa17.14■□□□□ 0.33
SND1-203ENST00000463020 GUCY2FP51841 1108 aa17.14■□□□□ 0.33
SND1-203ENST00000463020 PTGDRQ13258 359 aa17.14■□□□□ 0.33
SND1-203ENST00000463020 TRIM29Q14134 588 aa17.14■□□□□ 0.33
SND1-203ENST00000463020 SIM2Q14190 667 aaPredicted RBP17.14■□□□□ 0.33
SND1-203ENST00000463020 ANKRD1Q15327 319 aa17.14■□□□□ 0.33
SND1-203ENST00000463020 TTC38Q5R3I4 469 aa17.14■□□□□ 0.33
SND1-203ENST00000463020 CYP4A22Q5TCH4 519 aa17.14■□□□□ 0.33
SND1-203ENST00000463020 TPGS2Q68CL5 300 aa17.14■□□□□ 0.33
SND1-203ENST00000463020 CELF5Q8N6W0 485 aaKnown RBP17.14■□□□□ 0.33
SND1-203ENST00000463020 BEST2Q8NFU1 509 aa17.14■□□□□ 0.33
SND1-203ENST00000463020 ACAP3Q96P50 834 aa17.14■□□□□ 0.33
SND1-203ENST00000463020 MRPL4Q9BYD3 311 aaKnown RBP17.14■□□□□ 0.33
SND1-203ENST00000463020 ASAH2Q9NR71 780 aa17.14■□□□□ 0.33
SND1-203ENST00000463020 TOPORSQ9NS56 1045 aaPredicted RBP17.14■□□□□ 0.33
SND1-203ENST00000463020 SLC38A7Q9NVC3 462 aa17.14■□□□□ 0.33
SND1-203ENST00000463020 SPEGQ15772 3267 aa17.13■□□□□ 0.33
SND1-203ENST00000463020 H7C4K7 107 aa17.13■□□□□ 0.33
SND1-203ENST00000463020 PPEF2O14830 753 aa17.13■□□□□ 0.33
SND1-203ENST00000463020 SLC16A4O15374 487 aa17.13■□□□□ 0.33
SND1-203ENST00000463020 CPB1P15086 417 aa17.13■□□□□ 0.33
SND1-203ENST00000463020 CXCL12P48061 93 aa17.13■□□□□ 0.33
SND1-203ENST00000463020 FXR2P51116 673 aaKnown RBP eCLIP17.13■□□□□ 0.332e-15■□□□□ 8.6
SND1-203ENST00000463020 CCDC6Q16204 474 aa17.13■□□□□ 0.33
SND1-203ENST00000463020 ZNF280DQ6N043 979 aa17.13■□□□□ 0.33
SND1-203ENST00000463020 PKN3Q6P5Z2 889 aa17.13■□□□□ 0.33
SND1-203ENST00000463020 MPZL3Q6UWV2 235 aa17.13■□□□□ 0.33
SND1-203ENST00000463020 PRR23CQ6ZRP0 262 aa17.13■□□□□ 0.33
SND1-203ENST00000463020 DEPDC1BQ8WUY9 529 aa17.13■□□□□ 0.33
SND1-203ENST00000463020 ZNF512Q96ME7 567 aaPredicted RBP17.13■□□□□ 0.33
SND1-203ENST00000463020 TMEM209Q96SK2 561 aa17.13■□□□□ 0.33
SND1-203ENST00000463020 TMEM134Q9H6X4 195 aa17.13■□□□□ 0.33
SND1-203ENST00000463020 RXFP3Q9NSD7 469 aa17.13■□□□□ 0.33
SND1-203ENST00000463020 ANKFY1Q9P2R3 1169 aa17.13■□□□□ 0.33
SND1-203ENST00000463020 RALYQ9UKM9 306 aaKnown RBP17.13■□□□□ 0.33
SND1-203ENST00000463020 PCDHB8Q9UN66 801 aa17.13■□□□□ 0.33
SND1-203ENST00000463020 CXCL8P10145 99 aa17.12■□□□□ 0.33
SND1-203ENST00000463020 RPL9P32969 192 aaKnown RBP17.12■□□□□ 0.33
SND1-203ENST00000463020 TOB1P50616 345 aaPredicted RBP17.12■□□□□ 0.33
SND1-203ENST00000463020 NRLP54845 237 aa17.12■□□□□ 0.33
SND1-203ENST00000463020 ANAPC15P60006 121 aa17.12■□□□□ 0.33
SND1-203ENST00000463020 RAD51AP2Q09MP3 1159 aa17.12■□□□□ 0.33
SND1-203ENST00000463020 ST3GAL2Q16842 350 aa17.12■□□□□ 0.33
SND1-203ENST00000463020 IQCEQ6IPM2 695 aa17.12■□□□□ 0.33
SND1-203ENST00000463020 GAREM2Q75VX8 874 aa17.12■□□□□ 0.33
SND1-203ENST00000463020 SPEM1Q8N4L4 309 aa17.12■□□□□ 0.33
SND1-203ENST00000463020 NETO1Q8TDF5 533 aa17.12■□□□□ 0.33
SND1-203ENST00000463020 SNX29Q8TEQ0 813 aa17.12■□□□□ 0.33
SND1-203ENST00000463020 MMTAG2Q9BU76 263 aaKnown RBP17.12■□□□□ 0.33
SND1-203ENST00000463020 SLITRK6Q9H5Y7 841 aa17.12■□□□□ 0.33
SND1-203ENST00000463020 KMT5AQ9NQR1 393 aa17.12■□□□□ 0.33
SND1-203ENST00000463020 POLR3BQ9NW08 1133 aaPredicted RBP17.12■□□□□ 0.33
SND1-203ENST00000463020 GTSE1Q9NYZ3 720 aa17.12■□□□□ 0.33
SND1-203ENST00000463020 LRWD1Q9UFC0 647 aa17.12■□□□□ 0.33
SND1-203ENST00000463020 RAB23Q9ULC3 237 aa17.12■□□□□ 0.33
SND1-203ENST00000463020 SLC27A5Q9Y2P5 690 aa17.12■□□□□ 0.33
SND1-203ENST00000463020 WDFY3Q8IZQ1 3526 aa17.12■□□□□ 0.33
SND1-203ENST00000463020 CITO14578 2027 aa17.11■□□□□ 0.33
SND1-203ENST00000463020 M0QZQ0 153 aa17.11■□□□□ 0.33
SND1-203ENST00000463020 PRAMEF12O95522 483 aa17.11■□□□□ 0.33
SND1-203ENST00000463020 MUTP22033 750 aa17.11■□□□□ 0.33
SND1-203ENST00000463020 TNFSF9P41273 254 aa17.11■□□□□ 0.33
SND1-203ENST00000463020 TNK2Q07912 1038 aa17.11■□□□□ 0.33
SND1-203ENST00000463020 FCHO2Q0JRZ9 810 aa17.11■□□□□ 0.33
SND1-203ENST00000463020 DUSP4Q13115 394 aa17.11■□□□□ 0.33
SND1-203ENST00000463020 CSRP2Q16527 193 aa17.11■□□□□ 0.33
SND1-203ENST00000463020 HAUS3Q68CZ6 603 aa17.11■□□□□ 0.33
SND1-203ENST00000463020 RINT1Q6NUQ1 792 aa17.11■□□□□ 0.33
SND1-203ENST00000463020 C1orf186Q6ZWK4 172 aa17.11■□□□□ 0.33
SND1-203ENST00000463020 ELMOD1Q8N336 334 aa17.11■□□□□ 0.33
SND1-203ENST00000463020 FAM160A2Q8N612 972 aaPredicted RBP17.11■□□□□ 0.33
SND1-203ENST00000463020 IGSF22Q8N9C0 903 aa17.11■□□□□ 0.33
SND1-203ENST00000463020 TCHPQ9BT92 498 aa17.11■□□□□ 0.33
SND1-203ENST00000463020 SMG9Q9H0W8 520 aaKnown RBP17.11■□□□□ 0.33
SND1-203ENST00000463020 MYBPHLA2RUH7 354 aa17.1■□□□□ 0.33
SND1-203ENST00000463020 SPECC1L-ADORA2AF8WAN1 911 aa17.1■□□□□ 0.33
SND1-203ENST00000463020 EIF5BO60841 1220 aaKnown RBP17.1■□□□□ 0.33
SND1-203ENST00000463020 CTHP32929 405 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms