RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 SDR42E1Q8WUS8 393 aa5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 CDCA5Q96FF9 252 aa5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 TRMT2BQ96GJ1 504 aaKnown RBP5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 LCORQ96JN0 433 aaPredicted RBP5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 CAPNS2Q96L46 248 aa5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 FSD1Q9BTV5 496 aa5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 CELF4Q9BZC1 486 aaKnown RBP5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 AASDHPPTQ9NRN7 309 aa5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 ZIM2Q9NZV7 527 aa5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 B4GALT6Q9UBX8 382 aa5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 HDAC9Q9UKV0 1011 aa5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 SPEF1Q9Y4P9 236 aa5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 PCDHA2Q9Y5H9 948 aa5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 SSC5DA1L4H1 1573 aa5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 BAZ2AQ9UIF9 1905 aaKnown RBP5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 GAKO14976 1311 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 PDS5AQ29RF7 1337 aaKnown RBP5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 TTC41PQ6P2S7 1318 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 MYO3BQ8WXR4 1341 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 ECM29Q5VYK3 1845 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 GPR75-ASB3A0A0A6YYF3 556 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 DDTLA6NHG4 134 aaPredicted RBP5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 UBE2Q2LH0YL09 131 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 H7BY64 318 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 DDX3XO00571 662 aaKnown RBP eCLIP5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 GABRDO14764 452 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 MATN3O15232 486 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 FOXP2O15409 715 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 PRKD3O94806 890 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 SOD2P04179 222 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 ADD2P35612 726 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 BCL6P41182 706 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 ECE1P42892 770 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 DNM2P50570 870 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 RRP1BQ14684 758 aaKnown RBP5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 SURF1Q15526 300 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 ATP13A4Q4VNC1 1196 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 TMEM177Q53S58 311 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 FAM47CQ5HY64 1035 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 EMC4Q5J8M3 183 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 TTC22Q5TAA0 569 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 VPS53Q5VIR6 699 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 SPTY2D1Q68D10 685 aaPredicted RBP5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 IQSEC1Q6DN90 963 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 MIGA2Q7L4E1 593 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 OVCH1Q7RTY7 1134 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 ZNF589Q86UQ0 364 aaPredicted RBP5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 ZBTB46Q86UZ6 589 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 CCAR1Q8IX12 1150 aaKnown RBP5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 TEX11Q8IYF3 940 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 CHPFQ8IZ52 775 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 KBTBD3Q8NAB2 608 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 TGFBRAP1Q8WUH2 860 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 FBXW5Q969U6 566 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 DCPSQ96C86 337 aaKnown RBP5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 CHMP4CQ96CF2 233 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 TMEM169Q96HH4 297 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 LOXL4Q96JB6 756 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 C8orf49Q96NF6 230 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 RIOK1Q9BRS2 568 aaKnown RBP5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 DEFB129Q9H1M3 183 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 INCENPQ9NQS7 918 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 THG1LQ9NWX6 298 aaKnown RBP5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 PGAP2Q9UHJ9 254 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 MAST2Q6P0Q8 1798 aa5.56□□□□□ -1.52
ATPAF1-203ENST00000460928 CEP290O15078 2479 aa5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 MAST3O60307 1309 aa5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 TNKSO95271 1327 aa5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 E2F8A0AVK6 867 aa5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 FAM47E-STBD1D6RA91 191 aa5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 WNT9AO14904 365 aa5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 HGSO14964 777 aaPredicted RBP5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 GSTA4O15217 222 aa5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 RNF113AO15541 343 aaKnown RBP5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 CELF2O95319 508 aaKnown RBP5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 SCGB1D2O95969 90 aa5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 STAT5AP42229 794 aa5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 LSSP48449 732 aa5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 MECP2P51608 486 aaKnown RBP5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 OCRLQ01968 901 aa5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 MAP3K12Q12852 859 aa5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 DNTTIP2Q5QJE6 756 aaKnown RBP5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 STK32CQ86UX6 486 aa5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 PNMA8AQ86V59 439 aaPredicted RBP5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 MYO1HQ8N1T3 1032 aa5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 SLC44A5Q8NCS7 719 aa5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 CHTF18Q8WVB6 975 aa5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 HOOK2Q96ED9 719 aa5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 DYNLL2Q96FJ2 89 aa5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 CLMNQ96JQ2 1002 aa5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 IPPKQ9H8X2 491 aa5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 SPTLC3Q9NUV7 552 aa5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 DTLQ9NZJ0 730 aa5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 COA3Q9Y2R0 106 aaPredicted RBP5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 SIPA1L1O43166 1804 aa5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 RFX7Q2KHR2 1363 aa5.55□□□□□ -1.52
ATPAF1-203ENST00000460928 MYH1P12882 1939 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 VCANP13611 3396 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms