RNA–Protein interactions for RNA: ENST00000460886.1

COL6A2-207, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 306 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-207ENST00000460886 PDXDC1Q6P996 788 aa10.29□□□□□ -0.76
COL6A2-207ENST00000460886 SPATA31D4Q6ZUB0 917 aa10.29□□□□□ -0.76
COL6A2-207ENST00000460886 RTL10Q7L3V2 364 aa10.29□□□□□ -0.76
COL6A2-207ENST00000460886 EPM2AIP1Q7L775 607 aaPredicted RBP10.29□□□□□ -0.76
COL6A2-207ENST00000460886 FRMD5Q7Z6J6 570 aa10.29□□□□□ -0.76
COL6A2-207ENST00000460886 NELFCDQ8IXH7 590 aa10.29□□□□□ -0.76
COL6A2-207ENST00000460886 ZNF507Q8TCN5 953 aa10.29□□□□□ -0.76
COL6A2-207ENST00000460886 SCFD1Q8WVM8 642 aa10.29□□□□□ -0.76
COL6A2-207ENST00000460886 ERCC4Q92889 916 aaPredicted RBP10.29□□□□□ -0.76
COL6A2-207ENST00000460886 NKD2Q969F2 451 aaPredicted RBP10.29□□□□□ -0.76
COL6A2-207ENST00000460886 ACAP3Q96P50 834 aa10.29□□□□□ -0.76
COL6A2-207ENST00000460886 TTPALQ9BTX7 342 aa10.29□□□□□ -0.76
COL6A2-207ENST00000460886 MSTO1Q9BUK6 570 aa10.29□□□□□ -0.76
COL6A2-207ENST00000460886 CXCL16Q9H2A7 254 aa10.29□□□□□ -0.76
COL6A2-207ENST00000460886 TMEM206Q9H813 350 aa10.29□□□□□ -0.76
COL6A2-207ENST00000460886 DLGAP2Q9P1A6 1054 aa10.29□□□□□ -0.76
COL6A2-207ENST00000460886 CACNG4Q9UBN1 327 aa10.29□□□□□ -0.76
COL6A2-207ENST00000460886 HOOK1Q9UJC3 728 aaKnown RBP10.29□□□□□ -0.76
COL6A2-207ENST00000460886 FBXL21Q9UKT6 434 aa10.29□□□□□ -0.76
COL6A2-207ENST00000460886 DNAH14Q0VDD8 3507 aa10.28□□□□□ -0.76
COL6A2-207ENST00000460886 OGTO15294 1046 aa10.28□□□□□ -0.76
COL6A2-207ENST00000460886 RHOBTB3O94955 611 aa10.28□□□□□ -0.76
COL6A2-207ENST00000460886 CFHP08603 1231 aa10.28□□□□□ -0.76
COL6A2-207ENST00000460886 CLTAP09496 248 aa10.28□□□□□ -0.76
COL6A2-207ENST00000460886 RPL17P18621 184 aaKnown RBP10.28□□□□□ -0.76
COL6A2-207ENST00000460886 ADSSP30520 456 aa10.28□□□□□ -0.76
COL6A2-207ENST00000460886 HOXD13P35453 343 aa10.28□□□□□ -0.76
COL6A2-207ENST00000460886 TNFSF9P41273 254 aa10.28□□□□□ -0.76
COL6A2-207ENST00000460886 FOXK2Q01167 660 aa10.28□□□□□ -0.76
COL6A2-207ENST00000460886 KCNB1Q14721 858 aa10.28□□□□□ -0.76
COL6A2-207ENST00000460886 ZBTB41Q5SVQ8 909 aa10.28□□□□□ -0.76
COL6A2-207ENST00000460886 PRSS55Q6UWB4 352 aaPredicted RBP10.28□□□□□ -0.76
COL6A2-207ENST00000460886 KIAA0895Q8NCT3 520 aa10.28□□□□□ -0.76
COL6A2-207ENST00000460886 GPR152Q8TDT2 470 aa10.28□□□□□ -0.76
COL6A2-207ENST00000460886 POMGNT1Q8WZA1 660 aa10.28□□□□□ -0.76
COL6A2-207ENST00000460886 RABGGTAQ92696 567 aa10.28□□□□□ -0.76
COL6A2-207ENST00000460886 PPP1R10Q96QC0 940 aaKnown RBP10.28□□□□□ -0.76
COL6A2-207ENST00000460886 SEMA4AQ9H3S1 761 aa10.28□□□□□ -0.76
COL6A2-207ENST00000460886 PIDD1Q9HB75 910 aa10.28□□□□□ -0.76
COL6A2-207ENST00000460886 TOPORSQ9NS56 1045 aaPredicted RBP10.28□□□□□ -0.76
COL6A2-207ENST00000460886 LMBRD1Q9NUN5 540 aa10.28□□□□□ -0.76
COL6A2-207ENST00000460886 AGO2Q9UKV8 859 aaKnown RBP10.28□□□□□ -0.76
COL6A2-207ENST00000460886 PCDHA5Q9Y5H7 936 aa10.28□□□□□ -0.76
COL6A2-207ENST00000460886 STYXL1Q9Y6J8 313 aa10.28□□□□□ -0.76
COL6A2-207ENST00000460886 EP300Q09472 2414 aaPredicted RBP10.27□□□□□ -0.76
COL6A2-207ENST00000460886 MIA3Q5JRA6 1907 aa10.27□□□□□ -0.76
COL6A2-207ENST00000460886 OTOGLQ3ZCN5 2332 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 CASTOR2A6NHX0 329 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 GOLGA6L22H0YM25 854 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 SMC2O95347 1197 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 C8AP07357 584 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 CXCL8P10145 99 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 FGFR3P22607 806 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 FSHRP23945 695 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 ACOT2P49753 483 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 STARD6P59095 220 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 RAB33AQ14088 237 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 PSMD5Q16401 504 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 KYAT1Q16773 422 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 KNOP1Q1ED39 458 aaKnown RBP10.27□□□□□ -0.77
COL6A2-207ENST00000460886 UVSSAQ2YD98 709 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 SLC10A6Q3KNW5 377 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 XKR4Q5GH76 650 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 GLRA4Q5JXX5 417 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 FAM171A1Q5VUB5 890 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 ARMCX5Q6P1M9 558 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 CD300LGQ6UXG3 332 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 ALKAL1Q6UXT8 129 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.27□□□□□ -0.77
COL6A2-207ENST00000460886 GET4Q7L5D6 327 aaPredicted RBP10.27□□□□□ -0.77
COL6A2-207ENST00000460886 ELOA2Q8IYF1 753 aaPredicted RBP10.27□□□□□ -0.77
COL6A2-207ENST00000460886 SMARCE1Q969G3 411 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 CBWD1Q9BRT8 395 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 PCIF1Q9H4Z3 704 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 RPF1Q9H9Y2 349 aaKnown RBP10.27□□□□□ -0.77
COL6A2-207ENST00000460886 TBC1D17Q9HA65 648 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 ARHGEF3Q9NR81 526 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 MTRRQ9UBK8 725 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 CDH7Q9ULB5 785 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 MAPK8IP1Q9UQF2 711 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 NUMBLQ9Y6R0 609 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 PATJQ8NI35 1801 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 UBE4BO95155 1302 aa10.27□□□□□ -0.77
COL6A2-207ENST00000460886 CITO14578 2027 aa10.26□□□□□ -0.77
COL6A2-207ENST00000460886 PDCD11Q14690 1871 aaKnown RBP10.26□□□□□ -0.77
COL6A2-207ENST00000460886 SMIM28A0A1B0GU29 152 aa10.26□□□□□ -0.77
COL6A2-207ENST00000460886 GOLGA8IPA6NC78 632 aa10.26□□□□□ -0.77
COL6A2-207ENST00000460886 GOLGA8JA6NMD2 632 aa10.26□□□□□ -0.77
COL6A2-207ENST00000460886 TULP1O00294 542 aaPredicted RBP10.26□□□□□ -0.77
COL6A2-207ENST00000460886 CLIC2O15247 247 aa10.26□□□□□ -0.77
COL6A2-207ENST00000460886 MEFVO15553 781 aaPredicted RBP10.26□□□□□ -0.77
COL6A2-207ENST00000460886 ADAM12O43184 909 aa10.26□□□□□ -0.77
COL6A2-207ENST00000460886 TGFB1I1O43294 461 aa10.26□□□□□ -0.77
COL6A2-207ENST00000460886 FAM189A1O60320 539 aa10.26□□□□□ -0.77
COL6A2-207ENST00000460886 GARTP22102 1010 aa10.26□□□□□ -0.77
COL6A2-207ENST00000460886 ENOX2Q16206 610 aaKnown RBP10.26□□□□□ -0.77
COL6A2-207ENST00000460886 CAMK4Q16566 473 aa10.26□□□□□ -0.77
COL6A2-207ENST00000460886 UPP1Q16831 310 aa10.26□□□□□ -0.77
COL6A2-207ENST00000460886 BMT2Q1RMZ1 405 aa10.26□□□□□ -0.77
COL6A2-207ENST00000460886 LIN9Q5TKA1 542 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms