RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 RPAINQ86UA6 219 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 APOBEC3FQ8IUX4 373 aaKnown RBP12.72□□□□□ -0.37
CPNE6-202ENST00000460657 HACE1Q8IYU2 909 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 TTC39CQ8N584 583 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 NIF3L1Q9GZT8 377 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 VAV3Q9UKW4 847 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 MYH2Q9UKX2 1941 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 IGKV6D-41A0A0C4DH26 115 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 SHOX2O60902 331 aaPredicted RBP12.72□□□□□ -0.37
CPNE6-202ENST00000460657 OSBPP22059 807 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 PEX19P40855 299 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 PSMC4P43686 418 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 CCNG2Q16589 344 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 ASTE1Q2TB18 679 aaPredicted RBP12.72□□□□□ -0.37
CPNE6-202ENST00000460657 ANKRD20A8PQ5CZ79 823 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 EPS8L1Q8TE68 723 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 PARD3BQ8TEW8 1205 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 GHRP10912 638 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 CCNA1P78396 465 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 GPAT2Q6NUI2 795 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 AGGF1Q8N302 714 aaeCLIP12.72□□□□□ -0.37
CPNE6-202ENST00000460657 ERP27Q96DN0 273 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 CD248Q9HCU0 757 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 CPSF2Q9P2I0 782 aaKnown RBP12.72□□□□□ -0.37
CPNE6-202ENST00000460657 GGA2Q9UJY4 613 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 DRG2P55039 364 aaKnown RBP12.72□□□□□ -0.37
CPNE6-202ENST00000460657 COPS2P61201 443 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 GCNT1Q02742 428 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 MXD4Q14582 209 aaPredicted RBP12.72□□□□□ -0.37
CPNE6-202ENST00000460657 SLC15A2Q16348 729 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 ZC3H18Q86VM9 953 aaKnown RBP12.72□□□□□ -0.37
CPNE6-202ENST00000460657 MCOLN2Q8IZK6 566 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 TATDN2Q93075 761 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 ZNF668Q96K58 619 aaPredicted RBP12.72□□□□□ -0.37
CPNE6-202ENST00000460657 ADAM33Q9BZ11 813 aa12.72□□□□□ -0.37
CPNE6-202ENST00000460657 USP54Q70EL1 1684 aa12.71□□□□□ -0.37
CPNE6-202ENST00000460657 HNRNPCL1O60812 293 aaKnown RBP12.71□□□□□ -0.37
CPNE6-202ENST00000460657 NPM3O75607 178 aaKnown RBP12.71□□□□□ -0.37
CPNE6-202ENST00000460657 ARL1P40616 181 aaPredicted RBP12.71□□□□□ -0.37
CPNE6-202ENST00000460657 DLG4P78352 724 aa12.71□□□□□ -0.37
CPNE6-202ENST00000460657 WDR75Q8IWA0 830 aaKnown RBP12.71□□□□□ -0.37
CPNE6-202ENST00000460657 RASGEF1CQ8N431 466 aa12.71□□□□□ -0.37
CPNE6-202ENST00000460657 EXD1Q8NHP7 514 aa12.71□□□□□ -0.37
CPNE6-202ENST00000460657 DDX23Q9BUQ8 820 aaKnown RBP12.71□□□□□ -0.37
CPNE6-202ENST00000460657 ZNF408Q9H9D4 720 aa12.71□□□□□ -0.37
CPNE6-202ENST00000460657 NOD2Q9HC29 1040 aa12.71□□□□□ -0.37
CPNE6-202ENST00000460657 MYOZ2Q9NPC6 264 aa12.71□□□□□ -0.37
CPNE6-202ENST00000460657 ANGPTL2Q9UKU9 493 aa12.71□□□□□ -0.37
CPNE6-202ENST00000460657 TRPM3Q9HCF6 1732 aaPredicted RBP12.71□□□□□ -0.37
CPNE6-202ENST00000460657 ALS2Q96Q42 1657 aa12.71□□□□□ -0.37
CPNE6-202ENST00000460657 RASSF10A6NK89 507 aa12.71□□□□□ -0.37
CPNE6-202ENST00000460657 TISP43B9A030 160 aa12.71□□□□□ -0.37
CPNE6-202ENST00000460657 SMAPO00193 183 aa12.71□□□□□ -0.37
CPNE6-202ENST00000460657 IGF2BP3O00425 579 aaKnown RBP eCLIP12.71□□□□□ -0.37
CPNE6-202ENST00000460657 OATP04181 439 aa12.71□□□□□ -0.37
CPNE6-202ENST00000460657 IFI35P80217 286 aaPredicted RBP12.71□□□□□ -0.37
CPNE6-202ENST00000460657 IFRD2Q12894 506 aaPredicted RBP12.71□□□□□ -0.37
CPNE6-202ENST00000460657 GEN1Q17RS7 908 aa12.71□□□□□ -0.37
CPNE6-202ENST00000460657 TATDN1Q6P1N9 297 aa12.71□□□□□ -0.37
CPNE6-202ENST00000460657 OR6B3Q8NGW1 331 aa12.71□□□□□ -0.37
CPNE6-202ENST00000460657 KCNV2Q8TDN2 545 aa12.71□□□□□ -0.37
CPNE6-202ENST00000460657 SPIRE2Q8WWL2 714 aa12.71□□□□□ -0.37
CPNE6-202ENST00000460657 SEPT1Q8WYJ6 367 aa12.71□□□□□ -0.37
CPNE6-202ENST00000460657 COL14A1Q05707 1796 aaKnown RBP12.71□□□□□ -0.38
CPNE6-202ENST00000460657 CFAP69A5D8W1 941 aa12.71□□□□□ -0.38
CPNE6-202ENST00000460657 MAP3K7O43318 606 aa12.71□□□□□ -0.38
CPNE6-202ENST00000460657 CCND1P24385 295 aa12.71□□□□□ -0.38
CPNE6-202ENST00000460657 DUPD1Q68J44 220 aa12.71□□□□□ -0.38
CPNE6-202ENST00000460657 KIF2BQ8N4N8 673 aa12.71□□□□□ -0.38
CPNE6-202ENST00000460657 DNAAF3Q8N9W5 541 aa12.71□□□□□ -0.38
CPNE6-202ENST00000460657 C1orf131Q8NDD1 294 aaKnown RBP12.71□□□□□ -0.38
CPNE6-202ENST00000460657 KAT5Q92993 513 aa12.71□□□□□ -0.38
CPNE6-202ENST00000460657 SCYL1Q96KG9 808 aa12.71□□□□□ -0.38
CPNE6-202ENST00000460657 NUDCD1Q96RS6 583 aa12.71□□□□□ -0.38
CPNE6-202ENST00000460657 DNAJC18Q9H819 358 aa12.71□□□□□ -0.38
CPNE6-202ENST00000460657 PXMP2Q9NR77 195 aa12.71□□□□□ -0.38
CPNE6-202ENST00000460657 PCYOX1Q9UHG3 505 aa12.71□□□□□ -0.38
CPNE6-202ENST00000460657 GOLGA8RI6L899 631 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 M0QZ92 97 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 CST8O60676 142 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 FAM83AQ86UY5 434 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 SPATA24Q86W54 205 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 SUGP1Q8IWZ8 645 aaKnown RBP12.7□□□□□ -0.38
CPNE6-202ENST00000460657 CENPTQ96BT3 561 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 SCAF8Q9UPN6 1271 aaKnown RBP12.7□□□□□ -0.38
CPNE6-202ENST00000460657 SPECC1L-ADORA2AF8WAN1 911 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 SERPINB6P35237 376 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 PGM5Q15124 567 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 MAGEB18Q96M61 343 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 LRRC4Q9HBW1 653 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 AVENQ9NQS1 362 aaPredicted RBP12.7□□□□□ -0.38
CPNE6-202ENST00000460657 LRRC4BQ9NT99 713 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 NFIL3Q16649 462 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 EAPPQ56P03 285 aaPredicted RBP12.7□□□□□ -0.38
CPNE6-202ENST00000460657 NXNQ6DKJ4 435 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 C3orf62Q6ZUJ4 267 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 MAP4K3Q8IVH8 894 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 LRRC57Q8N9N7 239 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 DCLK3Q9C098 648 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 UBN1Q9NPG3 1134 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms