RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.22■■□□□ 1.47
C9orf3-209ENST00000460573 ZNF516Q92618 1163 aa24.22■■□□□ 1.47
C9orf3-209ENST00000460573 SUSD3Q96L08 255 aa24.22■■□□□ 1.47
C9orf3-209ENST00000460573 AGAP1Q9UPQ3 857 aa24.22■■□□□ 1.47
C9orf3-209ENST00000460573 ARHGEF37A1IGU5 675 aa24.21■■□□□ 1.47
C9orf3-209ENST00000460573 URODP06132 367 aa24.21■■□□□ 1.47
C9orf3-209ENST00000460573 KRT19P08727 400 aa24.21■■□□□ 1.47
C9orf3-209ENST00000460573 CCDC192P0DO97 292 aa24.21■■□□□ 1.47
C9orf3-209ENST00000460573 IL9P15248 144 aa24.21■■□□□ 1.47
C9orf3-209ENST00000460573 POLR2BP30876 1174 aaKnown RBP24.21■■□□□ 1.47
C9orf3-209ENST00000460573 GTF2H1P32780 548 aa24.21■■□□□ 1.47
C9orf3-209ENST00000460573 GLUD2P49448 558 aa24.21■■□□□ 1.47
C9orf3-209ENST00000460573 AARSP49588 968 aaKnown RBP eCLIP24.21■■□□□ 1.47
C9orf3-209ENST00000460573 NDUFV1P49821 464 aa24.21■■□□□ 1.47
C9orf3-209ENST00000460573 LILRA4P59901 499 aa24.21■■□□□ 1.47
C9orf3-209ENST00000460573 DLG4P78352 724 aa24.21■■□□□ 1.47
C9orf3-209ENST00000460573 DSG1Q02413 1049 aa24.21■■□□□ 1.47
C9orf3-209ENST00000460573 SV2CQ496J9 727 aa24.21■■□□□ 1.47
C9orf3-209ENST00000460573 CCDC40Q4G0X9 1142 aa24.21■■□□□ 1.47
C9orf3-209ENST00000460573 FAM171A1Q5VUB5 890 aa24.21■■□□□ 1.47
C9orf3-209ENST00000460573 KIAA1841Q6NSI8 718 aa24.21■■□□□ 1.47
C9orf3-209ENST00000460573 PDXDC1Q6P996 788 aa24.21■■□□□ 1.47
C9orf3-209ENST00000460573 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.21■■□□□ 1.47
C9orf3-209ENST00000460573 CXorf38Q8TB03 319 aa24.21■■□□□ 1.47
C9orf3-209ENST00000460573 MED15Q96RN5 788 aa24.21■■□□□ 1.47
C9orf3-209ENST00000460573 TTPALQ9BTX7 342 aa24.21■■□□□ 1.47
C9orf3-209ENST00000460573 C1QTNF1Q9BXJ1 281 aa24.21■■□□□ 1.47
C9orf3-209ENST00000460573 MRPL17Q9NRX2 175 aaKnown RBP24.21■■□□□ 1.47
C9orf3-209ENST00000460573 SIX4Q9UIU6 781 aa24.21■■□□□ 1.47
C9orf3-209ENST00000460573 SPTBN5Q9NRC6 3674 aaKnown RBP24.2■■□□□ 1.46
C9orf3-209ENST00000460573 PPEF2O14830 753 aa24.2■■□□□ 1.46
C9orf3-209ENST00000460573 SYN3O14994 580 aa24.2■■□□□ 1.46
C9orf3-209ENST00000460573 CXCL14O95715 111 aa24.2■■□□□ 1.46
C9orf3-209ENST00000460573 C4BPAP04003 597 aaKnown RBP24.2■■□□□ 1.46
C9orf3-209ENST00000460573 BRCC3P46736 316 aa24.2■■□□□ 1.46
C9orf3-209ENST00000460573 MARSP56192 900 aaKnown RBP24.2■■□□□ 1.46
C9orf3-209ENST00000460573 MYO1EQ12965 1108 aa24.2■■□□□ 1.46
C9orf3-209ENST00000460573 TAS1R1Q7RTX1 841 aa24.2■■□□□ 1.46
C9orf3-209ENST00000460573 MRPL43Q8N983 215 aaKnown RBP24.2■■□□□ 1.46
C9orf3-209ENST00000460573 ENOX1Q8TC92 643 aaKnown RBP24.2■■□□□ 1.46
C9orf3-209ENST00000460573 NAT10Q9H0A0 1025 aaKnown RBP24.2■■□□□ 1.46
C9orf3-209ENST00000460573 M0QZQ0 153 aa24.19■■□□□ 1.46
C9orf3-209ENST00000460573 PHACTR2O75167 634 aa24.19■■□□□ 1.46
C9orf3-209ENST00000460573 FGFR3P22607 806 aa24.19■■□□□ 1.46
C9orf3-209ENST00000460573 IGFBP6P24592 240 aaPredicted RBP24.19■■□□□ 1.46
C9orf3-209ENST00000460573 IRS1P35568 1242 aa24.19■■□□□ 1.46
C9orf3-209ENST00000460573 CREMQ03060 361 aa24.19■■□□□ 1.46
C9orf3-209ENST00000460573 HYAL1Q12794 435 aa24.19■■□□□ 1.46
C9orf3-209ENST00000460573 BIRC3Q13489 604 aa24.19■■□□□ 1.46
C9orf3-209ENST00000460573 TRPC3Q13507 836 aa24.19■■□□□ 1.46
C9orf3-209ENST00000460573 CLUL1Q15846 466 aa24.19■■□□□ 1.46
C9orf3-209ENST00000460573 C1orf220Q5T0J3 134 aa24.19■■□□□ 1.46
C9orf3-209ENST00000460573 KIAA0319Q5VV43 1072 aa24.19■■□□□ 1.46
C9orf3-209ENST00000460573 PLPP4Q5VZY2 271 aa24.19■■□□□ 1.46
C9orf3-209ENST00000460573 DSTYKQ6XUX3 929 aa24.19■■□□□ 1.46
C9orf3-209ENST00000460573 TMEM130Q8N3G9 435 aa24.19■■□□□ 1.46
C9orf3-209ENST00000460573 APPL2Q8NEU8 664 aa24.19■■□□□ 1.46
C9orf3-209ENST00000460573 THAP9Q9H5L6 903 aa24.19■■□□□ 1.46
C9orf3-209ENST00000460573 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.19■■□□□ 1.46
C9orf3-209ENST00000460573 PCDHB8Q9UN66 801 aa24.19■■□□□ 1.46
C9orf3-209ENST00000460573 FSD2A1L4K1 749 aa24.18■■□□□ 1.46
C9orf3-209ENST00000460573 KPNA7A9QM74 516 aa24.18■■□□□ 1.46
C9orf3-209ENST00000460573 ATICP31939 592 aa24.18■■□□□ 1.46
C9orf3-209ENST00000460573 PTPN14Q15678 1187 aa24.18■■□□□ 1.46
C9orf3-209ENST00000460573 ZACNQ401N2 412 aa24.18■■□□□ 1.46
C9orf3-209ENST00000460573 SV2AQ7L0J3 742 aa24.18■■□□□ 1.46
C9orf3-209ENST00000460573 RBM23Q86U06 439 aaKnown RBP24.18■■□□□ 1.46
C9orf3-209ENST00000460573 CEP57Q86XR8 500 aa24.18■■□□□ 1.46
C9orf3-209ENST00000460573 FAM114A1Q8IWE2 563 aa24.18■■□□□ 1.46
C9orf3-209ENST00000460573 TMEM8AQ9HCN3 771 aa24.18■■□□□ 1.46
C9orf3-209ENST00000460573 SYCE3A1L190 88 aa24.17■■□□□ 1.46
C9orf3-209ENST00000460573 GRXCR2A6NFK2 248 aa24.17■■□□□ 1.46
C9orf3-209ENST00000460573 C2orf71A6NGG8 1288 aa24.17■■□□□ 1.46
C9orf3-209ENST00000460573 LILRB3O75022 631 aa24.17■■□□□ 1.46
C9orf3-209ENST00000460573 STAU1O95793 577 aaKnown RBP24.17■■□□□ 1.46
C9orf3-209ENST00000460573 TRIM49P0CI25 452 aa24.17■■□□□ 1.46
C9orf3-209ENST00000460573 TRIM49CP0CI26 452 aa24.17■■□□□ 1.46
C9orf3-209ENST00000460573 TCERG1LQ5VWI1 586 aa24.17■■□□□ 1.46
C9orf3-209ENST00000460573 TDRD10Q5VZ19 366 aaKnown RBP24.17■■□□□ 1.46
C9orf3-209ENST00000460573 KRT39Q6A163 491 aa24.17■■□□□ 1.46
C9orf3-209ENST00000460573 C15orf39Q6ZRI6 1047 aa24.17■■□□□ 1.46
C9orf3-209ENST00000460573 ANKS3Q6ZW76 656 aa24.17■■□□□ 1.46
C9orf3-209ENST00000460573 GJD3Q8N144 294 aa24.17■■□□□ 1.46
C9orf3-209ENST00000460573 PIK3R5Q8WYR1 880 aa24.17■■□□□ 1.46
C9orf3-209ENST00000460573 SLC35C1Q96A29 364 aa24.17■■□□□ 1.46
C9orf3-209ENST00000460573 HPDLQ96IR7 371 aa24.17■■□□□ 1.46
C9orf3-209ENST00000460573 SENP8Q96LD8 212 aa24.17■■□□□ 1.46
C9orf3-209ENST00000460573 CDCA3Q99618 268 aaPredicted RBP24.17■■□□□ 1.46
C9orf3-209ENST00000460573 EMILIN2Q9BXX0 1053 aa24.17■■□□□ 1.46
C9orf3-209ENST00000460573 XIRP2A4UGR9 3374 aa24.16■■□□□ 1.46
C9orf3-209ENST00000460573 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.16■■□□□ 1.46
C9orf3-209ENST00000460573 SPTLC1O15269 473 aa24.16■■□□□ 1.46
C9orf3-209ENST00000460573 CST3P01034 146 aaPredicted RBP24.16■■□□□ 1.46
C9orf3-209ENST00000460573 ODC1P11926 461 aa24.16■■□□□ 1.46
C9orf3-209ENST00000460573 TYMPP19971 482 aa24.16■■□□□ 1.46
C9orf3-209ENST00000460573 CA8P35219 290 aa24.16■■□□□ 1.46
C9orf3-209ENST00000460573 NRIP1P48552 1158 aa24.16■■□□□ 1.46
C9orf3-209ENST00000460573 PPP3CAQ08209 521 aa24.16■■□□□ 1.46
C9orf3-209ENST00000460573 DCAF17Q5H9S7 520 aaPredicted RBP24.16■■□□□ 1.46
C9orf3-209ENST00000460573 RTP2Q5QGT7 225 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms