RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 LMAN2LQ9H0V9 348 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 PRO3102Q9H379 93 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 VRTNQ9H8Y1 702 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 TUBGCP4Q9UGJ1 667 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 COQ4Q9Y3A0 265 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 PCDHGA4Q9Y5G9 962 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 MRPL42Q9Y6G3 142 aaKnown RBP11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 MKI67P46013 3256 aaKnown RBP11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 FSD2A1L4K1 749 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 LINC01553A4QN01 128 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 LGALS16A8MUM7 142 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 C5orf67F2Z3F1 127 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 H7C4K7 107 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 DDHD2O94830 711 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 CA3P07451 260 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 TRIM49P0CI25 452 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 TRIM49CP0CI26 452 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 DNAJB2P25686 324 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 COPB1P53618 953 aaKnown RBP11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 DLG4P78352 724 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 PLCB2Q00722 1185 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 UBXN1Q04323 297 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 USP41Q3LFD5 358 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 HSP90AA4PQ58FG1 418 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 ZNF280BQ86YH2 543 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 THEM5Q8N1Q8 247 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 COLGALT1Q8NBJ5 622 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 ZSWIM2Q8NEG5 633 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 OR5B17Q8NGF7 314 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 C18orf25Q96B23 403 aaPredicted RBP11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 IGSF21Q96ID5 467 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 NT5C1BQ96P26 610 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 NUP58Q9BVL2 599 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 PBX4Q9BYU1 374 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 VPS16Q9H269 839 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 CWH43Q9H720 699 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 CYP3A43Q9HB55 503 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 MIOSQ9NXC5 875 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 GDAP2Q9NXN4 497 aa11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 PRG3Q9Y2Y8 225 aaPredicted RBP11.84□□□□□ -0.51
SMNDC1-203ENST00000460483 MYH11P35749 1972 aa11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 GOLGA6L3A6NEY3 463 aa11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 GOLGA6L6A8MZA4 724 aa11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 FGF18O76093 207 aa11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 HLA-DRAP01903 254 aa11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 CCDC172P0C7W6 258 aa11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 LHX1P48742 406 aa11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 SLC11A1P49279 550 aa11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 GATMP50440 423 aa11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 RABGGTBP53611 331 aa11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 LILRA4P59901 499 aa11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 ERVK-21P61565 698 aa11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 PPP3CAQ08209 521 aa11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 NAB2Q15742 525 aa11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 WDR72Q3MJ13 1102 aa11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 TDRD10Q5VZ19 366 aaKnown RBP11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 C15orf39Q6ZRI6 1047 aa11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 ANKS3Q6ZW76 656 aa11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 TMCO2Q7Z6W1 182 aaPredicted RBP11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 DDX53Q86TM3 631 aaKnown RBP11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 SLC39A11Q8N1S5 342 aa11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 TOP6BLQ8N6T0 577 aa11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 EHBP1Q8NDI1 1231 aa11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 ZNF397Q8NF99 534 aaPredicted RBP11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 MMS19Q96T76 1030 aa11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 NGRNQ9NPE2 291 aaKnown RBP11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 TAB2Q9NYJ8 693 aa11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 GCNT4Q9P109 453 aa11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 DPP7Q9UHL4 492 aa11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 PLAGL2Q9UPG8 496 aa11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 LHX6Q9UPM6 363 aa11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 COL4A6Q14031 1691 aa11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 SIP14410 1827 aa11.83□□□□□ -0.52
SMNDC1-203ENST00000460483 LTBP2Q14767 1821 aa11.82□□□□□ -0.52
SMNDC1-203ENST00000460483 A0A1W2PQC6 194 aa11.82□□□□□ -0.52
SMNDC1-203ENST00000460483 CYB561D2O14569 222 aa11.82□□□□□ -0.52
SMNDC1-203ENST00000460483 ASS1P00966 412 aaKnown RBP11.82□□□□□ -0.52
SMNDC1-203ENST00000460483 URODP06132 367 aa11.82□□□□□ -0.52
SMNDC1-203ENST00000460483 TYMPP19971 482 aa11.82□□□□□ -0.52
SMNDC1-203ENST00000460483 PCSK1P29120 753 aa11.82□□□□□ -0.52
SMNDC1-203ENST00000460483 AFF1P51825 1210 aaKnown RBP11.82□□□□□ -0.52
SMNDC1-203ENST00000460483 MFAP3P55082 362 aa11.82□□□□□ -0.52
SMNDC1-203ENST00000460483 FANCCQ00597 558 aa11.82□□□□□ -0.52
SMNDC1-203ENST00000460483 GCNT1Q02742 428 aa11.82□□□□□ -0.52
SMNDC1-203ENST00000460483 TAP1Q03518 808 aa11.82□□□□□ -0.52
SMNDC1-203ENST00000460483 EPC2Q52LR7 807 aa11.82□□□□□ -0.52
SMNDC1-203ENST00000460483 LMBRD2Q68DH5 695 aaPredicted RBP11.82□□□□□ -0.52
SMNDC1-203ENST00000460483 FUT10Q6P4F1 479 aa11.82□□□□□ -0.52
SMNDC1-203ENST00000460483 SARM1Q6SZW1 724 aa11.82□□□□□ -0.52
SMNDC1-203ENST00000460483 TAS1R2Q8TE23 839 aa11.82□□□□□ -0.52
SMNDC1-203ENST00000460483 ZNF516Q92618 1163 aa11.82□□□□□ -0.52
SMNDC1-203ENST00000460483 TNIP3Q96KP6 325 aa11.82□□□□□ -0.52
SMNDC1-203ENST00000460483 SUSD3Q96L08 255 aa11.82□□□□□ -0.52
SMNDC1-203ENST00000460483 TTPALQ9BTX7 342 aa11.82□□□□□ -0.52
SMNDC1-203ENST00000460483 EMILIN2Q9BXX0 1053 aa11.82□□□□□ -0.52
SMNDC1-203ENST00000460483 TRIM5Q9C035 493 aa11.82□□□□□ -0.52
SMNDC1-203ENST00000460483 NIF3L1Q9GZT8 377 aa11.82□□□□□ -0.52
SMNDC1-203ENST00000460483 MRPL17Q9NRX2 175 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms