RNA–Protein interactions for RNA: ENST00000460023.5

CCDC78-205, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-205ENST00000460023 ODC1P11926 461 aa23.24■■□□□ 1.31
CCDC78-205ENST00000460023 PTPN2P17706 415 aa23.24■■□□□ 1.31
CCDC78-205ENST00000460023 PLA2G5P39877 138 aa23.24■■□□□ 1.31
CCDC78-205ENST00000460023 ARPP19P56211 112 aa23.24■■□□□ 1.31
CCDC78-205ENST00000460023 KCNA1Q09470 495 aa23.24■■□□□ 1.31
CCDC78-205ENST00000460023 FOXD4L6Q3SYB3 417 aaPredicted RBP23.24■■□□□ 1.31
CCDC78-205ENST00000460023 RESP18Q5W5W9 173 aa23.24■■□□□ 1.31
CCDC78-205ENST00000460023 CRELD2Q6UXH1 353 aaPredicted RBP23.24■■□□□ 1.31
CCDC78-205ENST00000460023 FOXD4L3Q6VB84 417 aaPredicted RBP23.24■■□□□ 1.31
CCDC78-205ENST00000460023 GET4Q7L5D6 327 aaPredicted RBP23.24■■□□□ 1.31
CCDC78-205ENST00000460023 CYP4F11Q9HBI6 524 aa23.24■■□□□ 1.31
CCDC78-205ENST00000460023 DPP3Q9NY33 737 aa23.24■■□□□ 1.31
CCDC78-205ENST00000460023 TISP43B9A030 160 aa23.23■■□□□ 1.31
CCDC78-205ENST00000460023 EIF3DO15371 548 aaKnown RBP eCLIP23.23■■□□□ 1.31
CCDC78-205ENST00000460023 EXTL3O43909 919 aa23.23■■□□□ 1.31
CCDC78-205ENST00000460023 NFICP08651 508 aa23.23■■□□□ 1.31
CCDC78-205ENST00000460023 SNRPFP62306 86 aaKnown RBP23.23■■□□□ 1.31
CCDC78-205ENST00000460023 ASIC1P78348 528 aa23.23■■□□□ 1.31
CCDC78-205ENST00000460023 DNM1Q05193 864 aaKnown RBP23.23■■□□□ 1.31
CCDC78-205ENST00000460023 MYBPC2Q14324 1141 aa23.23■■□□□ 1.31
CCDC78-205ENST00000460023 PABPC1LQ4VXU2 614 aaKnown RBP23.23■■□□□ 1.31
CCDC78-205ENST00000460023 ELMOD1Q8N336 334 aa23.23■■□□□ 1.31
CCDC78-205ENST00000460023 FAM213AQ9BRX8 229 aa23.23■■□□□ 1.31
CCDC78-205ENST00000460023 KIAA1586Q9HCI6 787 aa23.23■■□□□ 1.31
CCDC78-205ENST00000460023 PVALEFA0A1B0GWK0 134 aa23.22■■□□□ 1.31
CCDC78-205ENST00000460023 ANHXE9PGG2 379 aa23.22■■□□□ 1.31
CCDC78-205ENST00000460023 ZNF197O14709 1029 aa23.22■■□□□ 1.31
CCDC78-205ENST00000460023 MICAL2O94851 1124 aa23.22■■□□□ 1.31
CCDC78-205ENST00000460023 CPB1P15086 417 aa23.22■■□□□ 1.31
CCDC78-205ENST00000460023 PNPLA4P41247 253 aa23.22■■□□□ 1.31
CCDC78-205ENST00000460023 TAF6P49848 677 aa23.22■■□□□ 1.31
CCDC78-205ENST00000460023 CASP5P51878 434 aa23.22■■□□□ 1.31
CCDC78-205ENST00000460023 PKP1Q13835 747 aa23.22■■□□□ 1.31
CCDC78-205ENST00000460023 SURF1Q15526 300 aa23.22■■□□□ 1.31
CCDC78-205ENST00000460023 OVOS1Q6IE37 1185 aa23.22■■□□□ 1.31
CCDC78-205ENST00000460023 IQCEQ6IPM2 695 aa23.22■■□□□ 1.31
CCDC78-205ENST00000460023 ARMCX5Q6P1M9 558 aa23.22■■□□□ 1.31
CCDC78-205ENST00000460023 UNC13DQ70J99 1090 aa23.22■■□□□ 1.31
CCDC78-205ENST00000460023 MTSS1LQ765P7 747 aa23.22■■□□□ 1.31
CCDC78-205ENST00000460023 BRSK2Q8IWQ3 736 aa23.22■■□□□ 1.31
CCDC78-205ENST00000460023 CEP57L1Q8IYX8 460 aa23.22■■□□□ 1.31
CCDC78-205ENST00000460023 SLC44A3Q8N4M1 653 aa23.22■■□□□ 1.31
CCDC78-205ENST00000460023 LEMD2Q8NC56 503 aa23.22■■□□□ 1.31
CCDC78-205ENST00000460023 SENP8Q96LD8 212 aa23.22■■□□□ 1.31
CCDC78-205ENST00000460023 DNMT3BQ9UBC3 853 aaKnown RBP23.22■■□□□ 1.31
CCDC78-205ENST00000460023 WNT16Q9UBV4 365 aa23.22■■□□□ 1.31
CCDC78-205ENST00000460023 PRPF6O94906 941 aaKnown RBP23.21■■□□□ 1.31
CCDC78-205ENST00000460023 CYP11A1P05108 521 aa23.21■■□□□ 1.31
CCDC78-205ENST00000460023 KRT85P78386 507 aa23.21■■□□□ 1.31
CCDC78-205ENST00000460023 ADCY1Q08828 1119 aa23.21■■□□□ 1.31
CCDC78-205ENST00000460023 GPR17Q13304 367 aa23.21■■□□□ 1.31
CCDC78-205ENST00000460023 PLD1Q13393 1074 aa23.21■■□□□ 1.31
CCDC78-205ENST00000460023 METTL23Q86XA0 190 aa23.21■■□□□ 1.31
CCDC78-205ENST00000460023 GPD1LQ8N335 351 aa23.21■■□□□ 1.31
CCDC78-205ENST00000460023 ZNF507Q8TCN5 953 aa23.21■■□□□ 1.31
CCDC78-205ENST00000460023 FGF13Q92913 245 aa23.21■■□□□ 1.31
CCDC78-205ENST00000460023 ZNF512Q96ME7 567 aaPredicted RBP23.21■■□□□ 1.31
CCDC78-205ENST00000460023 ZNF560Q96MR9 790 aa23.21■■□□□ 1.31
CCDC78-205ENST00000460023 IRF2BPLQ9H1B7 796 aa23.21■■□□□ 1.31
CCDC78-205ENST00000460023 RBAKQ9NYW8 714 aaPredicted RBP23.21■■□□□ 1.31
CCDC78-205ENST00000460023 GDE1Q9NZC3 331 aa23.21■■□□□ 1.31
CCDC78-205ENST00000460023 HSFX1Q9UBD0 423 aa23.21■■□□□ 1.31
CCDC78-205ENST00000460023 USP25Q9UHP3 1055 aa23.21■■□□□ 1.31
CCDC78-205ENST00000460023 UBE4BO95155 1302 aa23.2■■□□□ 1.3
CCDC78-205ENST00000460023 SRFP11831 508 aa23.2■■□□□ 1.3
CCDC78-205ENST00000460023 AVPR2P30518 371 aa23.2■■□□□ 1.3
CCDC78-205ENST00000460023 GUCY2FP51841 1108 aa23.2■■□□□ 1.3
CCDC78-205ENST00000460023 SMARCB1Q12824 385 aa23.2■■□□□ 1.3
CCDC78-205ENST00000460023 FAM26FQ5R3K3 315 aa23.2■■□□□ 1.3
CCDC78-205ENST00000460023 THEM5Q8N1Q8 247 aa23.2■■□□□ 1.3
CCDC78-205ENST00000460023 MFSD1Q9H3U5 465 aa23.2■■□□□ 1.3
CCDC78-205ENST00000460023 CGNQ9P2M7 1197 aaKnown RBP23.2■■□□□ 1.3
CCDC78-205ENST00000460023 MRPS23Q9Y3D9 190 aaKnown RBP23.2■■□□□ 1.3
CCDC78-205ENST00000460023 INSL5Q9Y5Q6 135 aa23.2■■□□□ 1.3
CCDC78-205ENST00000460023 DOCK8Q8NF50 2099 aa23.2■■□□□ 1.3
CCDC78-205ENST00000460023 MYL1P05976 194 aa23.19■■□□□ 1.3
CCDC78-205ENST00000460023 RHOP08100 348 aa23.19■■□□□ 1.3
CCDC78-205ENST00000460023 SLFN14P0C7P3 912 aa23.19■■□□□ 1.3
CCDC78-205ENST00000460023 CMA1P23946 247 aa23.19■■□□□ 1.3
CCDC78-205ENST00000460023 CLCN5P51795 746 aa23.19■■□□□ 1.3
CCDC78-205ENST00000460023 SV2CQ496J9 727 aa23.19■■□□□ 1.3
CCDC78-205ENST00000460023 CYP4A22Q5TCH4 519 aa23.19■■□□□ 1.3
CCDC78-205ENST00000460023 SPATA32Q96LK8 384 aa23.19■■□□□ 1.3
CCDC78-205ENST00000460023 FBXL21Q9UKT6 434 aa23.19■■□□□ 1.3
CCDC78-205ENST00000460023 R3HCC1Q9Y3T6 440 aaKnown RBP23.19■■□□□ 1.3
CCDC78-205ENST00000460023 TIMM13Q9Y5L4 95 aaPredicted RBP23.19■■□□□ 1.3
CCDC78-205ENST00000460023 ZNF233A6NK53 670 aa23.18■■□□□ 1.3
CCDC78-205ENST00000460023 KPNA7A9QM74 516 aa23.18■■□□□ 1.3
CCDC78-205ENST00000460023 SEC24AO95486 1093 aa23.18■■□□□ 1.3
CCDC78-205ENST00000460023 NTHL1P78549 312 aa23.18■■□□□ 1.3
CCDC78-205ENST00000460023 HTR4Q13639 388 aa23.18■■□□□ 1.3
CCDC78-205ENST00000460023 BECN1Q14457 450 aa23.18■■□□□ 1.3
CCDC78-205ENST00000460023 EPM2AIP1Q7L775 607 aaPredicted RBP23.18■■□□□ 1.3
CCDC78-205ENST00000460023 SAAL1Q96ER3 474 aa23.18■■□□□ 1.3
CCDC78-205ENST00000460023 CBWD1Q9BRT8 395 aa23.18■■□□□ 1.3
CCDC78-205ENST00000460023 SCAND2PQ9GZW5 306 aaPredicted RBP23.18■■□□□ 1.3
CCDC78-205ENST00000460023 IKZF4Q9H2S9 585 aa23.18■■□□□ 1.3
CCDC78-205ENST00000460023 ZNF318Q5VUA4 2279 aa23.18■■□□□ 1.3
CCDC78-205ENST00000460023 ANK1P16157 1881 aa23.17■■□□□ 1.3
CCDC78-205ENST00000460023 CYB561D2O14569 222 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms