RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 SCN1AP35498 2009 aa22.42■■□□□ 1.18
VARS-218ENST00000459667 BDP1A6H8Y1 2624 aa22.42■■□□□ 1.18
VARS-218ENST00000459667 ZMYND10O75800 440 aa22.42■■□□□ 1.18
VARS-218ENST00000459667 RHOBTB3O94955 611 aa22.42■■□□□ 1.18
VARS-218ENST00000459667 SP100P23497 879 aaPredicted RBP22.42■■□□□ 1.18
VARS-218ENST00000459667 FAM160A1Q05DH4 1040 aa22.42■■□□□ 1.18
VARS-218ENST00000459667 SNRNP35Q16560 246 aaKnown RBP22.42■■□□□ 1.18
VARS-218ENST00000459667 C12orf56Q8IXR9 622 aa22.42■■□□□ 1.18
VARS-218ENST00000459667 XXYLT1Q8NBI6 393 aa22.42■■□□□ 1.18
VARS-218ENST00000459667 ENGASEQ8NFI3 743 aa22.42■■□□□ 1.18
VARS-218ENST00000459667 GOLGA5Q8TBA6 731 aa22.42■■□□□ 1.18
VARS-218ENST00000459667 CACTINQ8WUQ7 758 aaKnown RBP22.42■■□□□ 1.18
VARS-218ENST00000459667 TIMM13Q9Y5L4 95 aaPredicted RBP22.42■■□□□ 1.18
VARS-218ENST00000459667 DENND4AQ7Z401 1863 aa22.42■■□□□ 1.18
VARS-218ENST00000459667 SPTLC1O15269 473 aa22.41■■□□□ 1.18
VARS-218ENST00000459667 TBC1D4O60343 1298 aa22.41■■□□□ 1.18
VARS-218ENST00000459667 C8AP07357 584 aa22.41■■□□□ 1.18
VARS-218ENST00000459667 TMEM191BP0C7N4 346 aa22.41■■□□□ 1.18
VARS-218ENST00000459667 ODC1P11926 461 aa22.41■■□□□ 1.18
VARS-218ENST00000459667 TAF6P49848 677 aa22.41■■□□□ 1.18
VARS-218ENST00000459667 ARPP19P56211 112 aa22.41■■□□□ 1.18
VARS-218ENST00000459667 ROR1Q01973 937 aa22.41■■□□□ 1.18
VARS-218ENST00000459667 YWHAHQ04917 246 aaPredicted RBP22.41■■□□□ 1.18
VARS-218ENST00000459667 SNW1Q13573 536 aaKnown RBP22.41■■□□□ 1.18
VARS-218ENST00000459667 SURF1Q15526 300 aa22.41■■□□□ 1.18
VARS-218ENST00000459667 CYP26C1Q6V0L0 522 aa22.41■■□□□ 1.18
VARS-218ENST00000459667 USP37Q86T82 979 aa22.41■■□□□ 1.18
VARS-218ENST00000459667 RDH13Q8NBN7 331 aa22.41■■□□□ 1.18
VARS-218ENST00000459667 SMG7Q92540 1137 aaKnown RBP22.41■■□□□ 1.18
VARS-218ENST00000459667 KHSRPQ92945 711 aaKnown RBP eCLIP22.41■■□□□ 1.18
VARS-218ENST00000459667 SENP8Q96LD8 212 aa22.41■■□□□ 1.18
VARS-218ENST00000459667 TSHZ2Q9NRE2 1034 aa22.41■■□□□ 1.18
VARS-218ENST00000459667 ITGB3P05106 788 aa22.4■■□□□ 1.18
VARS-218ENST00000459667 TYMPP19971 482 aa22.4■■□□□ 1.18
VARS-218ENST00000459667 KCNB1Q14721 858 aa22.4■■□□□ 1.18
VARS-218ENST00000459667 PPM1LQ5SGD2 360 aa22.4■■□□□ 1.18
VARS-218ENST00000459667 LMBRD2Q68DH5 695 aaPredicted RBP22.4■■□□□ 1.18
VARS-218ENST00000459667 CCDC149Q6ZUS6 474 aa22.4■■□□□ 1.18
VARS-218ENST00000459667 C1orf127Q8N9H9 656 aa22.4■■□□□ 1.18
VARS-218ENST00000459667 ZNF707Q96C28 371 aaPredicted RBP22.4■■□□□ 1.18
VARS-218ENST00000459667 FAM84AQ96KN4 292 aa22.4■■□□□ 1.18
VARS-218ENST00000459667 ZNF560Q96MR9 790 aa22.4■■□□□ 1.18
VARS-218ENST00000459667 RHOBTB2Q9BYZ6 727 aa22.4■■□□□ 1.18
VARS-218ENST00000459667 PRKD2Q9BZL6 878 aa22.4■■□□□ 1.18
VARS-218ENST00000459667 MTMR12Q9C0I1 747 aa22.4■■□□□ 1.18
VARS-218ENST00000459667 PIDD1Q9HB75 910 aa22.4■■□□□ 1.18
VARS-218ENST00000459667 NR2E1Q9Y466 385 aa22.4■■□□□ 1.18
VARS-218ENST00000459667 TSC2P49815 1807 aa22.4■■□□□ 1.18
VARS-218ENST00000459667 MUC3AQ02505 3323 aa22.39■■□□□ 1.18
VARS-218ENST00000459667 ARHGEF37A1IGU5 675 aa22.39■■□□□ 1.17
VARS-218ENST00000459667 WDR27A2RRH5 827 aa22.39■■□□□ 1.17
VARS-218ENST00000459667 OAZ2O95190 189 aa22.39■■□□□ 1.17
VARS-218ENST00000459667 KIF20AO95235 890 aa22.39■■□□□ 1.17
VARS-218ENST00000459667 PAPLNO95428 1278 aa22.39■■□□□ 1.17
VARS-218ENST00000459667 POLR2BP30876 1174 aaKnown RBP22.39■■□□□ 1.17
VARS-218ENST00000459667 PNOCQ13519 176 aa22.39■■□□□ 1.17
VARS-218ENST00000459667 SV2CQ496J9 727 aa22.39■■□□□ 1.17
VARS-218ENST00000459667 ZNF461Q8TAF7 563 aa22.39■■□□□ 1.17
VARS-218ENST00000459667 SLC7A14Q8TBB6 771 aa22.39■■□□□ 1.17
VARS-218ENST00000459667 ANKRD36BP1Q96IX9 119 aa22.39■■□□□ 1.17
VARS-218ENST00000459667 KCTD10Q9H3F6 313 aa22.39■■□□□ 1.17
VARS-218ENST00000459667 ITGA11Q9UKX5 1188 aa22.39■■□□□ 1.17
VARS-218ENST00000459667 PTPRJQ12913 1337 aa22.38■■□□□ 1.17
VARS-218ENST00000459667 PDXKO00764 312 aa22.38■■□□□ 1.17
VARS-218ENST00000459667 EXOC3O60645 756 aa22.38■■□□□ 1.17
VARS-218ENST00000459667 ABLIM3O94929 683 aa22.38■■□□□ 1.17
VARS-218ENST00000459667 HNRNPA1P09651 372 aaKnown RBP eCLIP22.38■■□□□ 1.17
VARS-218ENST00000459667 CPB1P15086 417 aa22.38■■□□□ 1.17
VARS-218ENST00000459667 HOXA9P31269 272 aa22.38■■□□□ 1.17
VARS-218ENST00000459667 PNPLA4P41247 253 aa22.38■■□□□ 1.17
VARS-218ENST00000459667 CYP24A1Q07973 514 aa22.38■■□□□ 1.17
VARS-218ENST00000459667 OVOS1Q6IE37 1185 aa22.38■■□□□ 1.17
VARS-218ENST00000459667 RNF135Q8IUD6 432 aa22.38■■□□□ 1.17
VARS-218ENST00000459667 WDR49Q8IV35 697 aa22.38■■□□□ 1.17
VARS-218ENST00000459667 CSGALNACT2Q8N6G5 542 aa22.38■■□□□ 1.17
VARS-218ENST00000459667 IPO9Q96P70 1041 aaKnown RBP22.38■■□□□ 1.17
VARS-218ENST00000459667 OXCT2Q9BYC2 517 aaPredicted RBP22.38■■□□□ 1.17
VARS-218ENST00000459667 INTS13Q9NVM9 706 aa22.38■■□□□ 1.17
VARS-218ENST00000459667 AGAP1Q9UPQ3 857 aa22.38■■□□□ 1.17
VARS-218ENST00000459667 KPNA7A9QM74 516 aa22.37■■□□□ 1.17
VARS-218ENST00000459667 C2CD4DB7Z1M9 353 aa22.37■■□□□ 1.17
VARS-218ENST00000459667 CYB561D2O14569 222 aa22.37■■□□□ 1.17
VARS-218ENST00000459667 TNNC2P02585 160 aa22.37■■□□□ 1.17
VARS-218ENST00000459667 KRT19P08727 400 aa22.37■■□□□ 1.17
VARS-218ENST00000459667 ELF1P32519 619 aa22.37■■□□□ 1.17
VARS-218ENST00000459667 PSMD6Q15008 389 aa22.37■■□□□ 1.17
VARS-218ENST00000459667 UVSSAQ2YD98 709 aa22.37■■□□□ 1.17
VARS-218ENST00000459667 TPGS2Q68CL5 300 aa22.37■■□□□ 1.17
VARS-218ENST00000459667 TDRD5Q8NAT2 981 aaKnown RBP22.37■■□□□ 1.17
VARS-218ENST00000459667 OR5B17Q8NGF7 314 aa22.37■■□□□ 1.17
VARS-218ENST00000459667 TIGD1Q96MW7 591 aa22.37■■□□□ 1.17
VARS-218ENST00000459667 FNBP1Q96RU3 617 aa22.37■■□□□ 1.17
VARS-218ENST00000459667 WDR6Q9NNW5 1121 aaKnown RBP22.37■■□□□ 1.17
VARS-218ENST00000459667 DSEQ9UL01 958 aa22.37■■□□□ 1.17
VARS-218ENST00000459667 MAPK8IP1Q9UQF2 711 aa22.37■■□□□ 1.17
VARS-218ENST00000459667 CLUHO75153 1309 aa22.36■■□□□ 1.17
VARS-218ENST00000459667 OR6C75A6NL08 312 aa22.36■■□□□ 1.17
VARS-218ENST00000459667 CCL16O15467 120 aa22.36■■□□□ 1.17
VARS-218ENST00000459667 CYP11A1P05108 521 aa22.36■■□□□ 1.17
VARS-218ENST00000459667 DLATP10515 647 aaKnown RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms