RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 BCO2Q9BYV7 579 aa5.21□□□□□ -1.58
GTF3C3-208ENST00000455546 CNTNAP3Q9BZ76 1288 aa5.21□□□□□ -1.58
GTF3C3-208ENST00000455546 CXCL16Q9H2A7 254 aa5.21□□□□□ -1.58
GTF3C3-208ENST00000455546 TMEM60Q9H2L4 133 aa5.21□□□□□ -1.58
GTF3C3-208ENST00000455546 C12orf49Q9H741 205 aa5.21□□□□□ -1.58
GTF3C3-208ENST00000455546 ZSWIM4Q9H7M6 989 aa5.21□□□□□ -1.58
GTF3C3-208ENST00000455546 TTC12Q9H892 705 aaPredicted RBP5.21□□□□□ -1.58
GTF3C3-208ENST00000455546 RSAD1Q9HA92 442 aa5.21□□□□□ -1.58
GTF3C3-208ENST00000455546 GPRC5CQ9NQ84 441 aa5.21□□□□□ -1.58
GTF3C3-208ENST00000455546 AGPAT5Q9NUQ2 364 aa5.21□□□□□ -1.58
GTF3C3-208ENST00000455546 FAM86C1Q9NVL1 165 aa5.21□□□□□ -1.58
GTF3C3-208ENST00000455546 DNAJB12Q9NXW2 375 aaKnown RBP5.21□□□□□ -1.58
GTF3C3-208ENST00000455546 PPP4R2Q9NY27 417 aa5.21□□□□□ -1.58
GTF3C3-208ENST00000455546 SALL4Q9UJQ4 1053 aa5.21□□□□□ -1.58
GTF3C3-208ENST00000455546 DBR1Q9UK59 544 aaKnown RBP5.21□□□□□ -1.58
GTF3C3-208ENST00000455546 PRG3Q9Y2Y8 225 aaPredicted RBP5.21□□□□□ -1.58
GTF3C3-208ENST00000455546 IPPQ9Y573 584 aa5.21□□□□□ -1.58
GTF3C3-208ENST00000455546 MYH11P35749 1972 aa5.21□□□□□ -1.58
GTF3C3-208ENST00000455546 STK36Q9NRP7 1315 aa5.21□□□□□ -1.58
GTF3C3-208ENST00000455546 CACNA1IQ9P0X4 2223 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 ARL5CA6NH57 179 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 METTL12A8MUP2 240 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 H0Y858 1186 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 USO1O60763 962 aaKnown RBP5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 DKC1O60832 514 aaKnown RBP eCLIP5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 MED24O75448 989 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 USP17L7P0C7H9 530 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 SPATA31C1P0DKV0 1188 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 EDN3P14138 238 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 CPB1P15086 417 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 ARF4P18085 180 aaPredicted RBP5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 LIG1P18858 919 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 NCLP19338 710 aaKnown RBP5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 IGFBP6P24592 240 aaPredicted RBP5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 ARL2P36404 184 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 MLH1P40692 756 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 RARRES1P49788 294 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 RAB27AP51159 221 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 SCNN1GP51170 649 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 CLCN4P51793 760 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 MBTD1Q05BQ5 628 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 ITIH3Q06033 890 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 TCF15Q12870 199 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 HYAL2Q12891 473 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 CAPSQ13938 189 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 ANKRD1Q15327 319 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 PTPN21Q16825 1174 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 MEI1Q5TIA1 1274 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 ZNF468Q5VIY5 522 aaPredicted RBP5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 CABP7Q86V35 215 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 CATSPER3Q86XQ3 398 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 PALB2Q86YC2 1186 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 CCDC83Q8IWF9 413 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 SUGP1Q8IWZ8 645 aaKnown RBP5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 DIS3L2Q8IYB7 885 aaKnown RBP5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 EXOC8Q8IYI6 725 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 COLGALT2Q8IYK4 626 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 GSTCDQ8NEC7 633 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 WASF1Q92558 559 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 GTF3C6Q969F1 213 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 RIPOR3Q96MK2 946 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 MTMR9Q96QG7 549 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 PAAF1Q9BRP4 392 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 GPR62Q9BZJ7 368 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 CSRNP2Q9H175 543 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 POLR3FQ9H1D9 316 aaPredicted RBP5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 NXF3Q9H4D5 531 aaKnown RBP5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 SUV39H2Q9H5I1 410 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 BRMS1Q9HCU9 246 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 MRPL17Q9NRX2 175 aaKnown RBP5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 MARCH5Q9NX47 278 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 NR2E1Q9Y466 385 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 IRAK3Q9Y616 596 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 AK5Q9Y6K8 562 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 VWA8A3KMH1 1905 aa5.2□□□□□ -1.58
GTF3C3-208ENST00000455546 NOTCH4Q99466 2003 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 CCDC195A0A1B0GUA6 201 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 FSD2A1L4K1 749 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 LRRIQ4A6NIV6 560 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 TEX28O15482 410 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 GAS2O43903 313 aaKnown RBP5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 NEMFO60524 1076 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 N4BP1O75113 896 aaKnown RBP5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 RFPL2O75678 378 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 MAP3K6O95382 1288 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 NPTXRO95502 500 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 RPL17P18621 184 aaKnown RBP5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 VAMP1P23763 118 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 MTHFRP42898 656 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 ANAPC15P60006 121 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 TRIM29Q14134 588 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 GIT2Q14161 759 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 TFDP1Q14186 410 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 MXD4Q14582 209 aaPredicted RBP5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 KIAA0319Q5VV43 1072 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 NOTUMQ6P988 496 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 GPR149Q86SP6 731 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 FAM177A1Q8N128 213 aaPredicted RBP5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 HASPINQ8TF76 798 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 RSAD2Q8WXG1 361 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms