RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 RBP5P82980 135 aa30.19■■■□□ 2.42
SMARCC1-203ENST00000454240 CREMQ03060 361 aa30.19■■■□□ 2.42
SMARCC1-203ENST00000454240 ENPEPQ07075 957 aa30.19■■■□□ 2.42
SMARCC1-203ENST00000454240 TMEM184AQ6ZMB5 413 aa30.19■■■□□ 2.42
SMARCC1-203ENST00000454240 INTS8Q75QN2 995 aaKnown RBP30.19■■■□□ 2.42
SMARCC1-203ENST00000454240 LRRC52Q8N7C0 313 aa30.19■■■□□ 2.42
SMARCC1-203ENST00000454240 MLKLQ8NB16 471 aa30.19■■■□□ 2.42
SMARCC1-203ENST00000454240 VN1R2Q8NFZ6 395 aa30.19■■■□□ 2.42
SMARCC1-203ENST00000454240 HLA-CQ95604 372 aa30.19■■■□□ 2.42
SMARCC1-203ENST00000454240 DUSP9Q99956 384 aaKnown RBP30.19■■■□□ 2.42
SMARCC1-203ENST00000454240 CLDND1Q9NY35 253 aa30.19■■■□□ 2.42
SMARCC1-203ENST00000454240 CTNND2Q9UQB3 1225 aa30.19■■■□□ 2.42
SMARCC1-203ENST00000454240 MTCL1Q9Y4B5 1905 aaKnown RBP30.18■■■□□ 2.42
SMARCC1-203ENST00000454240 BICDL2A1A5D9 508 aa30.18■■■□□ 2.42
SMARCC1-203ENST00000454240 KLRC2P26717 231 aa30.18■■■□□ 2.42
SMARCC1-203ENST00000454240 PNPLA4P41247 253 aa30.18■■■□□ 2.42
SMARCC1-203ENST00000454240 AP3M2P53677 418 aa30.18■■■□□ 2.42
SMARCC1-203ENST00000454240 PAK1Q13153 545 aa30.18■■■□□ 2.42
SMARCC1-203ENST00000454240 MRPL58Q14197 206 aaKnown RBP30.18■■■□□ 2.42
SMARCC1-203ENST00000454240 PSMD5Q16401 504 aa30.18■■■□□ 2.42
SMARCC1-203ENST00000454240 DSTYKQ6XUX3 929 aa30.18■■■□□ 2.42
SMARCC1-203ENST00000454240 ANKS3Q6ZW76 656 aa30.18■■■□□ 2.42
SMARCC1-203ENST00000454240 SLC22A17Q8WUG5 538 aa30.18■■■□□ 2.42
SMARCC1-203ENST00000454240 SENP8Q96LD8 212 aa30.18■■■□□ 2.42
SMARCC1-203ENST00000454240 ZNF560Q96MR9 790 aa30.18■■■□□ 2.42
SMARCC1-203ENST00000454240 UBE2ZQ9H832 354 aaPredicted RBP30.18■■■□□ 2.42
SMARCC1-203ENST00000454240 HCFC2Q9Y5Z7 792 aa30.18■■■□□ 2.42
SMARCC1-203ENST00000454240 KRT19P08727 400 aa30.17■■■□□ 2.42
SMARCC1-203ENST00000454240 VAMP7P51809 220 aa30.17■■■□□ 2.42
SMARCC1-203ENST00000454240 SV2CQ496J9 727 aa30.17■■■□□ 2.42
SMARCC1-203ENST00000454240 VARS2Q5ST30 1063 aaKnown RBP30.17■■■□□ 2.42
SMARCC1-203ENST00000454240 C1orf220Q5T0J3 134 aa30.17■■■□□ 2.42
SMARCC1-203ENST00000454240 PPFIBP1Q86W92 1011 aa30.17■■■□□ 2.42
SMARCC1-203ENST00000454240 APPL2Q8NEU8 664 aa30.17■■■□□ 2.42
SMARCC1-203ENST00000454240 CLSTN3Q9BQT9 956 aa30.17■■■□□ 2.42
SMARCC1-203ENST00000454240 MTRRQ9UBK8 725 aa30.17■■■□□ 2.42
SMARCC1-203ENST00000454240 BACE2Q9Y5Z0 518 aa30.17■■■□□ 2.42
SMARCC1-203ENST00000454240 TSC2P49815 1807 aa30.17■■■□□ 2.42
SMARCC1-203ENST00000454240 KPNA7A9QM74 516 aa30.16■■■□□ 2.42
SMARCC1-203ENST00000454240 IKBKBO14920 756 aa30.16■■■□□ 2.42
SMARCC1-203ENST00000454240 CST3P01034 146 aaPredicted RBP30.16■■■□□ 2.42
SMARCC1-203ENST00000454240 C4BPAP04003 597 aaKnown RBP30.16■■■□□ 2.42
SMARCC1-203ENST00000454240 ADH1AP07327 375 aa30.16■■■□□ 2.42
SMARCC1-203ENST00000454240 RPL17P18621 184 aaKnown RBP30.16■■■□□ 2.42
SMARCC1-203ENST00000454240 NDUFV1P49821 464 aa30.16■■■□□ 2.42
SMARCC1-203ENST00000454240 CLCN4P51793 760 aa30.16■■■□□ 2.42
SMARCC1-203ENST00000454240 NLRP12P59046 1061 aa30.16■■■□□ 2.42
SMARCC1-203ENST00000454240 RBM10P98175 930 aaKnown RBP30.16■■■□□ 2.42
SMARCC1-203ENST00000454240 DLX2Q07687 328 aaPredicted RBP30.16■■■□□ 2.42
SMARCC1-203ENST00000454240 BFSP1Q12934 665 aa30.16■■■□□ 2.42
SMARCC1-203ENST00000454240 USP37Q86T82 979 aa30.16■■■□□ 2.42
SMARCC1-203ENST00000454240 SLC16A3O15427 465 aaKnown RBP30.15■■■□□ 2.42
SMARCC1-203ENST00000454240 TBC1D4O60343 1298 aa30.15■■■□□ 2.42
SMARCC1-203ENST00000454240 TBX10O75333 385 aa30.15■■■□□ 2.42
SMARCC1-203ENST00000454240 C1RP00736 705 aa30.15■■■□□ 2.42
SMARCC1-203ENST00000454240 EPB41P11171 864 aaKnown RBP30.15■■■□□ 2.42
SMARCC1-203ENST00000454240 KRT13P13646 458 aa30.15■■■□□ 2.42
SMARCC1-203ENST00000454240 TYMPP19971 482 aa30.15■■■□□ 2.42
SMARCC1-203ENST00000454240 STX17P56962 302 aa30.15■■■□□ 2.42
SMARCC1-203ENST00000454240 CCDC183Q5T5S1 534 aa30.15■■■□□ 2.42
SMARCC1-203ENST00000454240 CEP63Q96MT8 703 aa30.15■■■□□ 2.42
SMARCC1-203ENST00000454240 CLEC1BQ9P126 229 aa30.15■■■□□ 2.42
SMARCC1-203ENST00000454240 RWDD2AQ9UIY3 292 aa30.15■■■□□ 2.42
SMARCC1-203ENST00000454240 OAZ2O95190 189 aa30.14■■■□□ 2.42
SMARCC1-203ENST00000454240 ODC1P11926 461 aa30.14■■■□□ 2.42
SMARCC1-203ENST00000454240 DPCR1Q3MIW9 517 aa30.14■■■□□ 2.42
SMARCC1-203ENST00000454240 TDRD10Q5VZ19 366 aaKnown RBP30.14■■■□□ 2.42
SMARCC1-203ENST00000454240 LLGL2Q6P1M3 1020 aa30.14■■■□□ 2.42
SMARCC1-203ENST00000454240 RSPO2Q6UXX9 243 aaPredicted RBP30.14■■■□□ 2.42
SMARCC1-203ENST00000454240 EP400NLQ6ZTU2 488 aa30.14■■■□□ 2.42
SMARCC1-203ENST00000454240 FILIP1Q7Z7B0 1213 aa30.14■■■□□ 2.42
SMARCC1-203ENST00000454240 THEGQ9P2T0 379 aa30.14■■■□□ 2.42
SMARCC1-203ENST00000454240 R3HCC1Q9Y3T6 440 aaKnown RBP30.14■■■□□ 2.42
SMARCC1-203ENST00000454240 TIMM13Q9Y5L4 95 aaPredicted RBP30.14■■■□□ 2.42
SMARCC1-203ENST00000454240 ARHGEF37A1IGU5 675 aa30.13■■■□□ 2.41
SMARCC1-203ENST00000454240 H7C4K7 107 aa30.13■■■□□ 2.41
SMARCC1-203ENST00000454240 CYB561D2O14569 222 aa30.13■■■□□ 2.41
SMARCC1-203ENST00000454240 ADAM12O43184 909 aa30.13■■■□□ 2.41
SMARCC1-203ENST00000454240 CYP11A1P05108 521 aa30.13■■■□□ 2.41
SMARCC1-203ENST00000454240 EPCAMP16422 314 aa30.13■■■□□ 2.41
SMARCC1-203ENST00000454240 HPDLQ96IR7 371 aa30.13■■■□□ 2.41
SMARCC1-203ENST00000454240 MED15Q96RN5 788 aa30.13■■■□□ 2.41
SMARCC1-203ENST00000454240 GDAP2Q9NXN4 497 aa30.13■■■□□ 2.41
SMARCC1-203ENST00000454240 TMEM63CQ9P1W3 806 aa30.13■■■□□ 2.41
SMARCC1-203ENST00000454240 KCNA5P22460 613 aa30.12■■■□□ 2.41
SMARCC1-203ENST00000454240 YWHAHQ04917 246 aaPredicted RBP30.12■■■□□ 2.41
SMARCC1-203ENST00000454240 MYO1EQ12965 1108 aa30.12■■■□□ 2.41
SMARCC1-203ENST00000454240 ZACNQ401N2 412 aa30.12■■■□□ 2.41
SMARCC1-203ENST00000454240 SLC8B1Q6J4K2 584 aa30.12■■■□□ 2.41
SMARCC1-203ENST00000454240 LILRA6Q6PI73 481 aa30.12■■■□□ 2.41
SMARCC1-203ENST00000454240 C15orf39Q6ZRI6 1047 aa30.12■■■□□ 2.41
SMARCC1-203ENST00000454240 GLYCTKQ8IVS8 523 aa30.12■■■□□ 2.41
SMARCC1-203ENST00000454240 CASP10Q92851 521 aa30.12■■■□□ 2.41
SMARCC1-203ENST00000454240 MSLNLQ96KJ4 702 aa30.12■■■□□ 2.41
SMARCC1-203ENST00000454240 BARX2Q9UMQ3 279 aaPredicted RBP30.12■■■□□ 2.41
SMARCC1-203ENST00000454240 TRIM49P0CI25 452 aa30.11■■■□□ 2.41
SMARCC1-203ENST00000454240 TRIM49CP0CI26 452 aa30.11■■■□□ 2.41
SMARCC1-203ENST00000454240 SRGAP2BP0DMP2 458 aa30.11■■■□□ 2.41
SMARCC1-203ENST00000454240 OR1D2P34982 312 aa30.11■■■□□ 2.41
SMARCC1-203ENST00000454240 TFF2Q03403 129 aa30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms