RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 FGF14Q92915 247 aa17.84■□□□□ 0.45
NCKIPSD-208ENST00000454134 NXPE3Q969Y0 559 aa17.84■□□□□ 0.45
NCKIPSD-208ENST00000454134 DHX58Q96C10 678 aa17.84■□□□□ 0.45
NCKIPSD-208ENST00000454134 ACCSQ96QU6 501 aa17.84■□□□□ 0.45
NCKIPSD-208ENST00000454134 TSPAN18Q96SJ8 248 aa17.84■□□□□ 0.45
NCKIPSD-208ENST00000454134 OLFML3Q9NRN5 406 aa17.84■□□□□ 0.45
NCKIPSD-208ENST00000454134 EXOC7Q9UPT5 735 aa17.84■□□□□ 0.45
NCKIPSD-208ENST00000454134 INSL5Q9Y5Q6 135 aa17.84■□□□□ 0.45
NCKIPSD-208ENST00000454134 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.84■□□□□ 0.45
NCKIPSD-208ENST00000454134 FRMD3A2A2Y4 597 aa17.83■□□□□ 0.44
NCKIPSD-208ENST00000454134 CUTAO60888 179 aa17.83■□□□□ 0.44
NCKIPSD-208ENST00000454134 OAZ2O95190 189 aa17.83■□□□□ 0.44
NCKIPSD-208ENST00000454134 F13A1P00488 732 aa17.83■□□□□ 0.44
NCKIPSD-208ENST00000454134 SRFP11831 508 aa17.83■□□□□ 0.44
NCKIPSD-208ENST00000454134 NPR3P17342 541 aa17.83■□□□□ 0.44
NCKIPSD-208ENST00000454134 LILRA4P59901 499 aa17.83■□□□□ 0.44
NCKIPSD-208ENST00000454134 E2F4Q16254 413 aa17.83■□□□□ 0.44
NCKIPSD-208ENST00000454134 SLC5A9Q2M3M2 681 aa17.83■□□□□ 0.44
NCKIPSD-208ENST00000454134 TPGS2Q68CL5 300 aa17.83■□□□□ 0.44
NCKIPSD-208ENST00000454134 CWF19L1Q69YN2 538 aaKnown RBP17.83■□□□□ 0.44
NCKIPSD-208ENST00000454134 ASTLQ6HA08 431 aaPredicted RBP17.83■□□□□ 0.44
NCKIPSD-208ENST00000454134 USP37Q86T82 979 aa17.83■□□□□ 0.44
NCKIPSD-208ENST00000454134 NPAS3Q8IXF0 933 aa17.83■□□□□ 0.44
NCKIPSD-208ENST00000454134 SYCP3Q8IZU3 236 aa17.83■□□□□ 0.44
NCKIPSD-208ENST00000454134 HPS3Q969F9 1004 aa17.83■□□□□ 0.44
NCKIPSD-208ENST00000454134 SAAL1Q96ER3 474 aa17.83■□□□□ 0.44
NCKIPSD-208ENST00000454134 PGLYRP2Q96PD5 576 aa17.83■□□□□ 0.44
NCKIPSD-208ENST00000454134 PHOX2BQ99453 314 aa17.83■□□□□ 0.44
NCKIPSD-208ENST00000454134 FAM213AQ9BRX8 229 aa17.83■□□□□ 0.44
NCKIPSD-208ENST00000454134 ASB7Q9H672 318 aa17.83■□□□□ 0.44
NCKIPSD-208ENST00000454134 CA14Q9ULX7 337 aa17.83■□□□□ 0.44
NCKIPSD-208ENST00000454134 DERAQ9Y315 318 aa17.83■□□□□ 0.44
NCKIPSD-208ENST00000454134 MRPS23Q9Y3D9 190 aaKnown RBP17.83■□□□□ 0.44
NCKIPSD-208ENST00000454134 ZFP37Q9Y6Q3 630 aaPredicted RBP17.83■□□□□ 0.44
NCKIPSD-208ENST00000454134 ANO9A1A5B4 782 aa17.82■□□□□ 0.44
NCKIPSD-208ENST00000454134 KRBA1A5PL33 1030 aa17.82■□□□□ 0.44
NCKIPSD-208ENST00000454134 PRPF6O94906 941 aaKnown RBP17.82■□□□□ 0.44
NCKIPSD-208ENST00000454134 PTPN5P54829 565 aa17.82■□□□□ 0.44
NCKIPSD-208ENST00000454134 WNT7BP56706 349 aa17.82■□□□□ 0.44
NCKIPSD-208ENST00000454134 POSTNQ15063 836 aa17.82■□□□□ 0.44
NCKIPSD-208ENST00000454134 ALYREFQ86V81 257 aaKnown RBP17.82■□□□□ 0.44
NCKIPSD-208ENST00000454134 CCDC65Q8IXS2 484 aa17.82■□□□□ 0.44
NCKIPSD-208ENST00000454134 EFCAB13Q8IY85 973 aa17.82■□□□□ 0.44
NCKIPSD-208ENST00000454134 GLIS3Q8NEA6 775 aa17.82■□□□□ 0.44
NCKIPSD-208ENST00000454134 GPR152Q8TDT2 470 aa17.82■□□□□ 0.44
NCKIPSD-208ENST00000454134 SENP8Q96LD8 212 aa17.82■□□□□ 0.44
NCKIPSD-208ENST00000454134 PRRX2Q99811 253 aa17.82■□□□□ 0.44
NCKIPSD-208ENST00000454134 CORO1BQ9BR76 489 aa17.82■□□□□ 0.44
NCKIPSD-208ENST00000454134 DPP3Q9NY33 737 aa17.82■□□□□ 0.44
NCKIPSD-208ENST00000454134 AFF4Q9UHB7 1163 aaKnown RBP17.82■□□□□ 0.44
NCKIPSD-208ENST00000454134 KCNH3Q9ULD8 1083 aa17.82■□□□□ 0.44
NCKIPSD-208ENST00000454134 C2CD2Q9Y426 696 aa17.82■□□□□ 0.44
NCKIPSD-208ENST00000454134 PCDHB13Q9Y5F0 798 aa17.82■□□□□ 0.44
NCKIPSD-208ENST00000454134 GOLGA8IPA6NC78 632 aa17.81■□□□□ 0.44
NCKIPSD-208ENST00000454134 GOLGA8JA6NMD2 632 aa17.81■□□□□ 0.44
NCKIPSD-208ENST00000454134 PIRO00625 290 aa17.81■□□□□ 0.44
NCKIPSD-208ENST00000454134 PI15O43692 258 aa17.81■□□□□ 0.44
NCKIPSD-208ENST00000454134 VNN2O95498 520 aa17.81■□□□□ 0.44
NCKIPSD-208ENST00000454134 CEBPBP17676 345 aa17.81■□□□□ 0.44
NCKIPSD-208ENST00000454134 PTPN2P17706 415 aa17.81■□□□□ 0.44
NCKIPSD-208ENST00000454134 CLCN5P51795 746 aa17.81■□□□□ 0.44
NCKIPSD-208ENST00000454134 TWF1Q12792 350 aa17.81■□□□□ 0.44
NCKIPSD-208ENST00000454134 OVOS1Q6IE37 1185 aa17.81■□□□□ 0.44
NCKIPSD-208ENST00000454134 POTEHQ6S545 545 aa17.81■□□□□ 0.44
NCKIPSD-208ENST00000454134 NOC3LQ8WTT2 800 aaKnown RBP17.81■□□□□ 0.44
NCKIPSD-208ENST00000454134 TCEAL4Q96EI5 215 aa17.81■□□□□ 0.44
NCKIPSD-208ENST00000454134 MCRS1Q96EZ8 462 aa17.81■□□□□ 0.44
NCKIPSD-208ENST00000454134 TMEM209Q96SK2 561 aa17.81■□□□□ 0.44
NCKIPSD-208ENST00000454134 KXD1Q9BQD3 176 aa17.81■□□□□ 0.44
NCKIPSD-208ENST00000454134 CBWD1Q9BRT8 395 aa17.81■□□□□ 0.44
NCKIPSD-208ENST00000454134 TNMDQ9H2S6 317 aa17.81■□□□□ 0.44
NCKIPSD-208ENST00000454134 KBTBD4Q9NVX7 518 aa17.81■□□□□ 0.44
NCKIPSD-208ENST00000454134 WNT16Q9UBV4 365 aa17.81■□□□□ 0.44
NCKIPSD-208ENST00000454134 STK25O00506 426 aa17.8■□□□□ 0.44
NCKIPSD-208ENST00000454134 NRG2O14511 850 aaPredicted RBP17.8■□□□□ 0.44
NCKIPSD-208ENST00000454134 ODC1P11926 461 aa17.8■□□□□ 0.44
NCKIPSD-208ENST00000454134 TYMPP19971 482 aa17.8■□□□□ 0.44
NCKIPSD-208ENST00000454134 CDR1P51861 262 aa17.8■□□□□ 0.44
NCKIPSD-208ENST00000454134 ALCAMQ13740 583 aa17.8■□□□□ 0.44
NCKIPSD-208ENST00000454134 MTSS1LQ765P7 747 aa17.8■□□□□ 0.44
NCKIPSD-208ENST00000454134 HS6ST3Q8IZP7 471 aa17.8■□□□□ 0.44
NCKIPSD-208ENST00000454134 FAM84AQ96KN4 292 aa17.8■□□□□ 0.44
NCKIPSD-208ENST00000454134 TRIM9Q9C026 710 aa17.8■□□□□ 0.44
NCKIPSD-208ENST00000454134 CRISPLD1Q9H336 500 aa17.8■□□□□ 0.44
NCKIPSD-208ENST00000454134 PCIF1Q9H4Z3 704 aa17.8■□□□□ 0.44
NCKIPSD-208ENST00000454134 FAM86C1Q9NVL1 165 aa17.8■□□□□ 0.44
NCKIPSD-208ENST00000454134 CEP72Q9P209 647 aa17.8■□□□□ 0.44
NCKIPSD-208ENST00000454134 SCN1AP35498 2009 aa17.79■□□□□ 0.44
NCKIPSD-208ENST00000454134 OR6C75A6NL08 312 aa17.79■□□□□ 0.44
NCKIPSD-208ENST00000454134 H0Y858 1186 aa17.79■□□□□ 0.44
NCKIPSD-208ENST00000454134 POLR2DO15514 142 aaKnown RBP17.79■□□□□ 0.44
NCKIPSD-208ENST00000454134 GALR2O43603 387 aaPredicted RBP17.79■□□□□ 0.44
NCKIPSD-208ENST00000454134 IL18RAPO95256 599 aa17.79■□□□□ 0.44
NCKIPSD-208ENST00000454134 CCR2P41597 374 aa17.79■□□□□ 0.44
NCKIPSD-208ENST00000454134 ME1P48163 572 aa17.79■□□□□ 0.44
NCKIPSD-208ENST00000454134 GPC5P78333 572 aa17.79■□□□□ 0.44
NCKIPSD-208ENST00000454134 ASIC1P78348 528 aa17.79■□□□□ 0.44
NCKIPSD-208ENST00000454134 POU5F1Q01860 360 aaKnown RBP17.79■□□□□ 0.44
NCKIPSD-208ENST00000454134 DNM1Q05193 864 aaKnown RBP17.79■□□□□ 0.44
NCKIPSD-208ENST00000454134 DUSP4Q13115 394 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms