RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 ADAMTS1Q9UHI8 967 aa6.44□□□□□ -1.38
SDC4P-201ENST00000453285 NAGPAQ9UK23 515 aa6.44□□□□□ -1.38
SDC4P-201ENST00000453285 ITGA11Q9UKX5 1188 aa6.44□□□□□ -1.38
SDC4P-201ENST00000453285 UBQLN1Q9UMX0 589 aaKnown RBP6.44□□□□□ -1.38
SDC4P-201ENST00000453285 POLIQ9UNA4 740 aa6.44□□□□□ -1.38
SDC4P-201ENST00000453285 AGAP1Q9UPQ3 857 aa6.44□□□□□ -1.38
SDC4P-201ENST00000453285 NLRC5Q86WI3 1866 aa6.44□□□□□ -1.38
SDC4P-201ENST00000453285 KIAA1671Q9BY89 1806 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 GOLGA6L9A6NEM1 432 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 C9IYK1 514 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 PITPNM1O00562 1244 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 INPPL1O15357 1258 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 TLR3O15455 904 aaKnown RBP6.43□□□□□ -1.38
SDC4P-201ENST00000453285 PQBP1O60828 265 aaKnown RBP6.43□□□□□ -1.38
SDC4P-201ENST00000453285 KRT19P08727 400 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 WEE2P0C1S8 567 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 TNNT1P13805 278 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 CYP11B1P15538 503 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 TNFAIP3P21580 790 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 IGFBP6P24592 240 aaPredicted RBP6.43□□□□□ -1.38
SDC4P-201ENST00000453285 LRPAP1P30533 357 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 USP8P40818 1118 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 MAGEA1P43355 309 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 RAB27AP51159 221 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 ATN1P54259 1190 aaPredicted RBP6.43□□□□□ -1.38
SDC4P-201ENST00000453285 CDH8P55286 799 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 FMO1Q01740 532 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 TLE2Q04725 743 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 BFSP2Q13515 415 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 SPA17Q15506 151 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 PTPN14Q15678 1187 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 TRIM60Q495X7 471 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 PLEKHG4Q58EX7 1191 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 ZNF667Q5HYK9 610 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 C10orf76Q5T2E6 689 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 C9orf57Q5W0N0 161 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 ALKBH5Q6P6C2 394 aaKnown RBP6.43□□□□□ -1.38
SDC4P-201ENST00000453285 LIMS2Q7Z4I7 341 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 DNAAF5Q86Y56 855 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 ECHDC2Q86YB7 292 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 PALB2Q86YC2 1186 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 GLYCTKQ8IVS8 523 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 RPUSD2Q8IZ73 545 aaKnown RBP6.43□□□□□ -1.38
SDC4P-201ENST00000453285 BEST2Q8NFU1 509 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 WHAMMQ8TF30 809 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 VWCEQ96DN2 955 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 HPDLQ96IR7 371 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 C16orf45Q96MC5 204 aaPredicted RBP6.43□□□□□ -1.38
SDC4P-201ENST00000453285 ZFP42Q96MM3 310 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 GAD1Q99259 594 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.43□□□□□ -1.38
SDC4P-201ENST00000453285 PACSIN1Q9BY11 444 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 IRX2Q9BZI1 471 aaPredicted RBP6.43□□□□□ -1.38
SDC4P-201ENST00000453285 IMPG2Q9BZV3 1241 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 WNT8AQ9H1J5 351 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 DEF6Q9H4E7 631 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 LZTFL1Q9NQ48 299 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 CISHQ9NSE2 258 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 SALL4Q9UJQ4 1053 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 GIT1Q9Y2X7 761 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 PCDHB4Q9Y5E5 795 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 DUSP10Q9Y6W6 482 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 ZNF638Q14966 1978 aaKnown RBP6.43□□□□□ -1.38
SDC4P-201ENST00000453285 ATP8B3O60423 1300 aa6.43□□□□□ -1.38
SDC4P-201ENST00000453285 GREB1Q4ZG55 1949 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 ARL5CA6NH57 179 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 ENPP3O14638 875 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 SPTLC1O15269 473 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 XPOTO43592 962 aaKnown RBP6.42□□□□□ -1.38
SDC4P-201ENST00000453285 OFD1O75665 1012 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 EOMESO95936 686 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 CXCL10P02778 98 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 MMEP08473 750 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 CFHP08603 1231 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 SKIP12755 728 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 KRT5P13647 590 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 MLH1P40692 756 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 RAP1GAPP47736 663 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 RAD23BP54727 409 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 BPIFB4P59827 614 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 ETF1P62495 437 aaKnown RBP6.42□□□□□ -1.38
SDC4P-201ENST00000453285 CDR2Q01850 454 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 WDR72Q3MJ13 1102 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 CCDC122Q5T0U0 273 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 TMEM270Q6UE05 265 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 SCARA5Q6ZMJ2 495 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 SLC24A5Q71RS6 500 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 KIAA1328Q86T90 577 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 HACE1Q8IYU2 909 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 CRIPAKQ8N1N5 446 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 LRRC52Q8N7C0 313 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 RBBP8NLQ8NC74 664 aaPredicted RBP6.42□□□□□ -1.38
SDC4P-201ENST00000453285 DBF4BQ8NFT6 615 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 PGBD4Q96DM1 585 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 PAWRQ96IZ0 340 aaKnown RBP6.42□□□□□ -1.38
SDC4P-201ENST00000453285 TWNKQ96RR1 684 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 WDR24Q96S15 920 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 ZSWIM1Q9BR11 485 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 IFIH1Q9BYX4 1025 aaKnown RBP6.42□□□□□ -1.38
SDC4P-201ENST00000453285 ISCUQ9H1K1 167 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms