RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 KRT72Q14CN4 511 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 CHRNA2Q15822 529 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 CYP1B1Q16678 543 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 LRRC36Q1X8D7 754 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 PROX2Q3B8N5 592 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 MMEL1Q495T6 779 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 NADK2Q4G0N4 442 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 MAP3K21Q5TCX8 1036 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 RHBDF2Q6PJF5 856 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 UGT2A3Q6UWM9 527 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 ARPINQ7Z6K5 226 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 TRABD2AQ86V40 505 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 TTC5Q8N0Z6 440 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 UBL4BQ8N7F7 174 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 RFWD2Q8NHY2 731 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 ZFP28Q8NHY6 868 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 MAML1Q92585 1016 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 LARP4BQ92615 738 aaKnown RBP9.11□□□□□ -0.95
LSM5-208ENST00000450169 PANX3Q96QZ0 392 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 BLOC1S4Q9NUP1 217 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 STK17AQ9UEE5 414 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 SAP30BPQ9UHR5 308 aaKnown RBP9.11□□□□□ -0.95
LSM5-208ENST00000450169 MTUS1Q9ULD2 1270 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 PCDHA6Q9UN73 950 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 STX8Q9UNK0 236 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 SMG5Q9UPR3 1016 aaKnown RBP9.11□□□□□ -0.95
LSM5-208ENST00000450169 NUB1Q9Y5A7 615 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 PCDHA8Q9Y5H6 950 aa9.11□□□□□ -0.95
LSM5-208ENST00000450169 MEGF6O75095 1541 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 SH3PXD2BA1X283 911 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 MIF4GDA9UHW6 222 aaKnown RBP9.1□□□□□ -0.95
LSM5-208ENST00000450169 M0R2N6 131 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 MATN2O00339 956 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 FBP2O00757 339 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 DNAJC6O75061 913 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 TRMUO75648 421 aaKnown RBP9.1□□□□□ -0.95
LSM5-208ENST00000450169 CSF1RP07333 972 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 GSTT2P0CG29 244 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 GSTT2BP0CG30 244 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 RPA3P35244 121 aaPredicted RBP9.1□□□□□ -0.95
LSM5-208ENST00000450169 KCNJ1P48048 391 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 CCR3P51677 355 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 RELAQ04206 551 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 ZBTB16Q05516 673 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 IFIT5Q13325 482 aaKnown RBP9.1□□□□□ -0.95
LSM5-208ENST00000450169 STAT4Q14765 748 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 KIF22Q14807 665 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 BCL2A1Q16548 175 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 ANKRD20A4Q4UJ75 823 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 SFT2D3Q587I9 215 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 SEL1L2Q5TEA6 688 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 DPY19L2P1Q6NXN4 242 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 DHDDSQ86SQ9 333 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 METTL25Q8N6Q8 603 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 SPATA5Q8NB90 893 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 CCDC110Q8TBZ0 833 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 ZNF75CPQ92670 426 aaPredicted RBP9.1□□□□□ -0.95
LSM5-208ENST00000450169 MRRFQ96E11 262 aaKnown RBP9.1□□□□□ -0.95
LSM5-208ENST00000450169 EIF2AQ9BY44 585 aaKnown RBP9.1□□□□□ -0.95
LSM5-208ENST00000450169 LRRC27Q9C0I9 530 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 GPAMQ9HCL2 828 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 SH3GLB2Q9NR46 395 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 FBXO6Q9NRD1 293 aaPredicted RBP9.1□□□□□ -0.95
LSM5-208ENST00000450169 IGSF5Q9NSI5 407 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 ASAP1Q9ULH1 1129 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 HBS1LQ9Y450 684 aaKnown RBP9.1□□□□□ -0.95
LSM5-208ENST00000450169 BAZ2BQ9UIF8 2168 aaKnown RBP9.1□□□□□ -0.95
LSM5-208ENST00000450169 PCDH11YQ9BZA8 1340 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 IRS4O14654 1257 aaPredicted RBP9.1□□□□□ -0.95
LSM5-208ENST00000450169 TOM1O60784 492 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 DKC1O60832 514 aaKnown RBP eCLIP9.1□□□□□ -0.95
LSM5-208ENST00000450169 FKBP6O75344 327 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 UQCRFS1P1P0C7P4 283 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 FGFR1P11362 822 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 CHRNB2P17787 502 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 ITIH2P19823 946 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 CA4P22748 312 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 PON1P27169 355 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 SLC5A2P31639 672 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 AQP4P55087 323 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 NAA20P61599 178 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 XIAPP98170 497 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 KRT17Q04695 432 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 GRB10Q13322 594 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 MSLNQ13421 630 aaPredicted RBP9.1□□□□□ -0.95
LSM5-208ENST00000450169 C1orf146Q5VVC0 180 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 SLC2A7Q6PXP3 512 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 ADGRG6Q86SQ4 1221 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 PRUNE1Q86TP1 453 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 SFR1Q86XK3 245 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 GLYCTKQ8IVS8 523 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 FAM186BQ8IYM0 893 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 LNX1Q8TBB1 728 aaPredicted RBP9.1□□□□□ -0.95
LSM5-208ENST00000450169 PLEKHO2Q8TD55 490 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 FAM172AQ8WUF8 416 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 KRT35Q92764 455 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 SKA1Q96BD8 255 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 PRR11Q96HE9 360 aaPredicted RBP9.1□□□□□ -0.95
LSM5-208ENST00000450169 VPS50Q96JG6 964 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 ZFRQ96KR1 1074 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms