RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 TRAPPC11Q7Z392 1133 aa11.47□□□□□ -0.57
SMPD4-211ENST00000449159 TMC2Q8TDI7 906 aa11.47□□□□□ -0.57
SMPD4-211ENST00000449159 MICAL1Q8TDZ2 1067 aa11.47□□□□□ -0.57
SMPD4-211ENST00000449159 ELMO3Q96BJ8 720 aa11.47□□□□□ -0.57
SMPD4-211ENST00000449159 CEP63Q96MT8 703 aa11.47□□□□□ -0.57
SMPD4-211ENST00000449159 LRFN3Q9BTN0 628 aa11.47□□□□□ -0.57
SMPD4-211ENST00000449159 DNAJC25Q9H1X3 360 aa11.47□□□□□ -0.57
SMPD4-211ENST00000449159 MMRN2Q9H8L6 949 aa11.47□□□□□ -0.57
SMPD4-211ENST00000449159 CHST7Q9NS84 486 aa11.47□□□□□ -0.57
SMPD4-211ENST00000449159 LMCD1Q9NZU5 365 aa11.47□□□□□ -0.57
SMPD4-211ENST00000449159 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-211ENST00000449159 MUC6Q6W4X9 2439 aa11.47□□□□□ -0.57
SMPD4-211ENST00000449159 C2orf71A6NGG8 1288 aa11.46□□□□□ -0.57
SMPD4-211ENST00000449159 VNN1O95497 513 aa11.46□□□□□ -0.57
SMPD4-211ENST00000449159 CST3P01034 146 aaPredicted RBP11.46□□□□□ -0.57
SMPD4-211ENST00000449159 C4BPAP04003 597 aaKnown RBP11.46□□□□□ -0.57
SMPD4-211ENST00000449159 URODP06132 367 aa11.46□□□□□ -0.57
SMPD4-211ENST00000449159 RPL17P18621 184 aaKnown RBP11.46□□□□□ -0.57
SMPD4-211ENST00000449159 FGFR3P22607 806 aa11.46□□□□□ -0.57
SMPD4-211ENST00000449159 ERCC5P28715 1186 aaPredicted RBP11.46□□□□□ -0.57
SMPD4-211ENST00000449159 GCLMP48507 274 aa11.46□□□□□ -0.57
SMPD4-211ENST00000449159 AARSP49588 968 aaKnown RBP eCLIP11.46□□□□□ -0.57
SMPD4-211ENST00000449159 BIRC3Q13489 604 aa11.46□□□□□ -0.57
SMPD4-211ENST00000449159 SMC1AQ14683 1233 aaKnown RBP11.46□□□□□ -0.57
SMPD4-211ENST00000449159 SKOR2Q2VWA4 1001 aaPredicted RBP11.46□□□□□ -0.57
SMPD4-211ENST00000449159 USP41Q3LFD5 358 aa11.46□□□□□ -0.57
SMPD4-211ENST00000449159 CCDC40Q4G0X9 1142 aa11.46□□□□□ -0.57
SMPD4-211ENST00000449159 HSP90AA4PQ58FG1 418 aa11.46□□□□□ -0.57
SMPD4-211ENST00000449159 DCAF17Q5H9S7 520 aaPredicted RBP11.46□□□□□ -0.57
SMPD4-211ENST00000449159 KIAA0319Q5VV43 1072 aa11.46□□□□□ -0.57
SMPD4-211ENST00000449159 TCERG1LQ5VWI1 586 aa11.46□□□□□ -0.57
SMPD4-211ENST00000449159 PRSS55Q6UWB4 352 aaPredicted RBP11.46□□□□□ -0.57
SMPD4-211ENST00000449159 C15orf39Q6ZRI6 1047 aa11.46□□□□□ -0.57
SMPD4-211ENST00000449159 FILIP1Q7Z7B0 1213 aa11.46□□□□□ -0.57
SMPD4-211ENST00000449159 RBM23Q86U06 439 aaKnown RBP11.46□□□□□ -0.57
SMPD4-211ENST00000449159 CEP57Q86XR8 500 aa11.46□□□□□ -0.57
SMPD4-211ENST00000449159 RIN2Q8WYP3 895 aaPredicted RBP11.46□□□□□ -0.57
SMPD4-211ENST00000449159 SUSD3Q96L08 255 aa11.46□□□□□ -0.57
SMPD4-211ENST00000449159 TTPALQ9BTX7 342 aa11.46□□□□□ -0.57
SMPD4-211ENST00000449159 NSUN3Q9H649 340 aaKnown RBP11.46□□□□□ -0.57
SMPD4-211ENST00000449159 EPHX3Q9H6B9 360 aa11.46□□□□□ -0.57
SMPD4-211ENST00000449159 NGRNQ9NPE2 291 aaKnown RBP11.46□□□□□ -0.57
SMPD4-211ENST00000449159 ANO10Q9NW15 660 aa11.46□□□□□ -0.57
SMPD4-211ENST00000449159 ARMCX3Q9UH62 379 aaPredicted RBP11.46□□□□□ -0.57
SMPD4-211ENST00000449159 DACH1Q9UI36 760 aa11.46□□□□□ -0.57
SMPD4-211ENST00000449159 TIMM13Q9Y5L4 95 aaPredicted RBP11.46□□□□□ -0.57
SMPD4-211ENST00000449159 PIEZO1Q92508 2521 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 TRIOO75962 3097 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 MTCL1Q9Y4B5 1905 aaKnown RBP11.45□□□□□ -0.58
SMPD4-211ENST00000449159 M0QZQ0 153 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 IKBKBO14920 756 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 PER2O15055 1255 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 TRAPPC3O43617 180 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 LILRB3O75022 631 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 LRRN2O75325 713 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 CXCL14O95715 111 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 NRIP1P48552 1158 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 TAF6P49848 677 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 MCCD1P59942 119 aaPredicted RBP11.45□□□□□ -0.58
SMPD4-211ENST00000449159 MYL6P60660 151 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 RBP5P82980 135 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 RBM10P98175 930 aaKnown RBP11.45□□□□□ -0.58
SMPD4-211ENST00000449159 DSG1Q02413 1049 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 HYAL1Q12794 435 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 ELAVL2Q12926 359 aaKnown RBP11.45□□□□□ -0.58
SMPD4-211ENST00000449159 ZSCAN23Q3MJ62 389 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 ZACNQ401N2 412 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 SV2CQ496J9 727 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 ANO6Q4KMQ2 910 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 KIAA1841Q6NSI8 718 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.45□□□□□ -0.58
SMPD4-211ENST00000449159 SV2AQ7L0J3 742 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 FRMD5Q7Z6J6 570 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 IRF2BP1Q8IU81 584 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 LRRC52Q8N7C0 313 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 MRPL43Q8N983 215 aaKnown RBP11.45□□□□□ -0.58
SMPD4-211ENST00000449159 TAS1R2Q8TE23 839 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 SLC35C1Q96A29 364 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 SENP8Q96LD8 212 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 CNOT6LQ96LI5 555 aaKnown RBP11.45□□□□□ -0.58
SMPD4-211ENST00000449159 ZNF560Q96MR9 790 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 FUCA2Q9BTY2 467 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 XYLT2Q9H1B5 865 aa11.45□□□□□ -0.58
SMPD4-211ENST00000449159 UBE2ZQ9H832 354 aaPredicted RBP11.45□□□□□ -0.58
SMPD4-211ENST00000449159 MRPL17Q9NRX2 175 aaKnown RBP11.45□□□□□ -0.58
SMPD4-211ENST00000449159 FAM86C2PA6NEL3 165 aa11.44□□□□□ -0.58
SMPD4-211ENST00000449159 KPNA7A9QM74 516 aa11.44□□□□□ -0.58
SMPD4-211ENST00000449159 TEX28O15482 410 aa11.44□□□□□ -0.58
SMPD4-211ENST00000449159 LINC01565O15544 149 aa11.44□□□□□ -0.58
SMPD4-211ENST00000449159 ADAM12O43184 909 aa11.44□□□□□ -0.58
SMPD4-211ENST00000449159 PHACTR2O75167 634 aa11.44□□□□□ -0.58
SMPD4-211ENST00000449159 HLA-DRAP01903 254 aa11.44□□□□□ -0.58
SMPD4-211ENST00000449159 CNPP09543 421 aaKnown RBP11.44□□□□□ -0.58
SMPD4-211ENST00000449159 AP3M2P53677 418 aa11.44□□□□□ -0.58
SMPD4-211ENST00000449159 MARSP56192 900 aaKnown RBP11.44□□□□□ -0.58
SMPD4-211ENST00000449159 ENPEPQ07075 957 aa11.44□□□□□ -0.58
SMPD4-211ENST00000449159 NCOA4Q13772 614 aa11.44□□□□□ -0.58
SMPD4-211ENST00000449159 PSMD5Q16401 504 aa11.44□□□□□ -0.58
SMPD4-211ENST00000449159 TPD52L1Q16890 204 aaPredicted RBP11.44□□□□□ -0.58
SMPD4-211ENST00000449159 CBWD6Q4V339 395 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms