RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 TRMT1LQ7Z2T5 733 aaKnown RBP20.23■□□□□ 0.83
SDCBP-204ENST00000447182 PHF13Q86YI8 300 aaPredicted RBP20.23■□□□□ 0.83
SDCBP-204ENST00000447182 THOC1Q96FV9 657 aaKnown RBP20.23■□□□□ 0.83
SDCBP-204ENST00000447182 TAAR1Q96RJ0 339 aa20.23■□□□□ 0.83
SDCBP-204ENST00000447182 KIAA1586Q9HCI6 787 aa20.23■□□□□ 0.83
SDCBP-204ENST00000447182 ADAM22Q9P0K1 906 aa20.23■□□□□ 0.83
SDCBP-204ENST00000447182 SENP1Q9P0U3 644 aa20.23■□□□□ 0.83
SDCBP-204ENST00000447182 TRIM33Q9UPN9 1127 aa20.23■□□□□ 0.83
SDCBP-204ENST00000447182 STK38LQ9Y2H1 464 aa20.23■□□□□ 0.83
SDCBP-204ENST00000447182 SCINQ9Y6U3 715 aa20.23■□□□□ 0.83
SDCBP-204ENST00000447182 EXOC1LA0A1B0GW35 172 aa20.22■□□□□ 0.83
SDCBP-204ENST00000447182 DNALI1O14645 258 aaPredicted RBP20.22■□□□□ 0.83
SDCBP-204ENST00000447182 EIF2AK2P19525 551 aaKnown RBP20.22■□□□□ 0.83
SDCBP-204ENST00000447182 ACO1P21399 889 aaKnown RBP20.22■□□□□ 0.83
SDCBP-204ENST00000447182 DSG3P32926 999 aa20.22■□□□□ 0.83
SDCBP-204ENST00000447182 ZACNQ401N2 412 aa20.22■□□□□ 0.83
SDCBP-204ENST00000447182 SPDYE2Q495Y8 402 aa20.22■□□□□ 0.83
SDCBP-204ENST00000447182 C2CD6Q53TS8 623 aa20.22■□□□□ 0.83
SDCBP-204ENST00000447182 MIS18BP1Q6P0N0 1132 aa20.22■□□□□ 0.83
SDCBP-204ENST00000447182 GSTA5Q7RTV2 222 aa20.22■□□□□ 0.83
SDCBP-204ENST00000447182 ABRAQ8N0Z2 381 aa20.22■□□□□ 0.83
SDCBP-204ENST00000447182 FAM213AQ9BRX8 229 aa20.22■□□□□ 0.83
SDCBP-204ENST00000447182 WDR81Q562E7 1941 aa20.22■□□□□ 0.83
SDCBP-204ENST00000447182 LIASO43766 372 aa20.21■□□□□ 0.83
SDCBP-204ENST00000447182 CETN2P41208 172 aa20.21■□□□□ 0.83
SDCBP-204ENST00000447182 NFX1Q12986 1120 aaKnown RBP20.21■□□□□ 0.83
SDCBP-204ENST00000447182 MOGSQ13724 837 aa20.21■□□□□ 0.83
SDCBP-204ENST00000447182 PSMD6Q15008 389 aa20.21■□□□□ 0.83
SDCBP-204ENST00000447182 RASA2Q15283 850 aa20.21■□□□□ 0.83
SDCBP-204ENST00000447182 FKBP1CQ5VVH2 108 aa20.21■□□□□ 0.83
SDCBP-204ENST00000447182 CYP4F22Q6NT55 531 aa20.21■□□□□ 0.83
SDCBP-204ENST00000447182 AKT1S1Q96B36 256 aa20.21■□□□□ 0.83
SDCBP-204ENST00000447182 FAM118BQ9BPY3 351 aa20.21■□□□□ 0.83
SDCBP-204ENST00000447182 SENP7Q9BQF6 1050 aa20.21■□□□□ 0.83
SDCBP-204ENST00000447182 C11orf70Q9BRQ4 267 aa20.21■□□□□ 0.83
SDCBP-204ENST00000447182 LRMDAQ9H2I8 198 aa20.21■□□□□ 0.83
SDCBP-204ENST00000447182 PPCSQ9HAB8 311 aa20.21■□□□□ 0.83
SDCBP-204ENST00000447182 SMG5Q9UPR3 1016 aaKnown RBP20.21■□□□□ 0.83
SDCBP-204ENST00000447182 USH1CQ9Y6N9 552 aa20.21■□□□□ 0.83
SDCBP-204ENST00000447182 EXTL3O43909 919 aa20.21■□□□□ 0.83
SDCBP-204ENST00000447182 HLA-DRAP01903 254 aa20.21■□□□□ 0.83
SDCBP-204ENST00000447182 C4BPAP04003 597 aaKnown RBP20.21■□□□□ 0.83
SDCBP-204ENST00000447182 ASNSP08243 561 aa20.21■□□□□ 0.83
SDCBP-204ENST00000447182 RPS6P62753 249 aaKnown RBP20.21■□□□□ 0.83
SDCBP-204ENST00000447182 C1QBPQ07021 282 aaKnown RBP20.21■□□□□ 0.83
SDCBP-204ENST00000447182 ADCY1Q08828 1119 aa20.21■□□□□ 0.83
SDCBP-204ENST00000447182 SPARCL1Q14515 664 aa20.21■□□□□ 0.83
SDCBP-204ENST00000447182 SETDB1Q15047 1291 aa20.21■□□□□ 0.83
SDCBP-204ENST00000447182 FAM47EQ6ZV65 393 aa20.21■□□□□ 0.83
SDCBP-204ENST00000447182 CNKSR1Q969H4 720 aa20.21■□□□□ 0.83
SDCBP-204ENST00000447182 DNAJC5Q9H3Z4 198 aa20.21■□□□□ 0.83
SDCBP-204ENST00000447182 ETNK1Q9HBU6 452 aa20.21■□□□□ 0.83
SDCBP-204ENST00000447182 SAYSD1Q9NPB0 183 aa20.21■□□□□ 0.83
SDCBP-204ENST00000447182 ZNF219Q9P2Y4 722 aaPredicted RBP20.21■□□□□ 0.83
SDCBP-204ENST00000447182 TRPC5Q9UL62 973 aaPredicted RBP20.21■□□□□ 0.83
SDCBP-204ENST00000447182 CD58P19256 250 aa20.2■□□□□ 0.82
SDCBP-204ENST00000447182 ABCD1P33897 745 aa20.2■□□□□ 0.82
SDCBP-204ENST00000447182 NAA25Q14CX7 972 aa20.2■□□□□ 0.82
SDCBP-204ENST00000447182 DLGAP5Q15398 846 aa20.2■□□□□ 0.82
SDCBP-204ENST00000447182 TAS1R3Q7RTX0 852 aa20.2■□□□□ 0.82
SDCBP-204ENST00000447182 ERICH1Q86X53 443 aa20.2■□□□□ 0.82
SDCBP-204ENST00000447182 RCOR2Q8IZ40 523 aa20.2■□□□□ 0.82
SDCBP-204ENST00000447182 PDCD2LQ9BRP1 358 aa20.2■□□□□ 0.82
SDCBP-204ENST00000447182 MYLK2Q9H1R3 596 aa20.2■□□□□ 0.82
SDCBP-204ENST00000447182 SLC38A10Q9HBR0 1119 aa20.2■□□□□ 0.82
SDCBP-204ENST00000447182 PDLIM7Q9NR12 457 aa20.2■□□□□ 0.82
SDCBP-204ENST00000447182 PHTF1Q9UMS5 762 aa20.2■□□□□ 0.82
SDCBP-204ENST00000447182 PCDHA10Q9Y5I2 948 aa20.2■□□□□ 0.82
SDCBP-204ENST00000447182 ARID2Q68CP9 1835 aa20.2■□□□□ 0.82
SDCBP-204ENST00000447182 WDR46O15213 610 aaKnown RBP20.2■□□□□ 0.82
SDCBP-204ENST00000447182 DIAPH2O60879 1101 aa20.2■□□□□ 0.82
SDCBP-204ENST00000447182 MYCLP12524 364 aaPredicted RBP20.2■□□□□ 0.82
SDCBP-204ENST00000447182 ATP2A2P16615 1042 aaKnown RBP20.2■□□□□ 0.82
SDCBP-204ENST00000447182 PDK4Q16654 411 aa20.2■□□□□ 0.82
SDCBP-204ENST00000447182 EAPPQ56P03 285 aaPredicted RBP20.2■□□□□ 0.82
SDCBP-204ENST00000447182 PRUNE1Q86TP1 453 aa20.2■□□□□ 0.82
SDCBP-204ENST00000447182 MCPH1Q8NEM0 835 aa20.2■□□□□ 0.82
SDCBP-204ENST00000447182 SUPT20HQ8NEM7 779 aa20.2■□□□□ 0.82
SDCBP-204ENST00000447182 UTP4Q969X6 686 aaKnown RBP20.2■□□□□ 0.82
SDCBP-204ENST00000447182 RBM41Q96IZ5 413 aaKnown RBP20.2■□□□□ 0.82
SDCBP-204ENST00000447182 CEP170P1Q96L14 293 aa20.2■□□□□ 0.82
SDCBP-204ENST00000447182 ZNF570Q96NI8 536 aa20.2■□□□□ 0.82
SDCBP-204ENST00000447182 ANKRD27Q96NW4 1050 aa20.2■□□□□ 0.82
SDCBP-204ENST00000447182 TRABDQ9H4I3 376 aa20.2■□□□□ 0.82
SDCBP-204ENST00000447182 SLC5A4Q9NY91 659 aa20.2■□□□□ 0.82
SDCBP-204ENST00000447182 ARHGAP28Q9P2N2 729 aa20.2■□□□□ 0.82
SDCBP-204ENST00000447182 CNTN6Q9UQ52 1028 aa20.2■□□□□ 0.82
SDCBP-204ENST00000447182 TLR3O15455 904 aaKnown RBP20.19■□□□□ 0.82
SDCBP-204ENST00000447182 STBD1O95210 358 aa20.19■□□□□ 0.82
SDCBP-204ENST00000447182 SOX10P56693 466 aa20.19■□□□□ 0.82
SDCBP-204ENST00000447182 MAP3K10Q02779 954 aa20.19■□□□□ 0.82
SDCBP-204ENST00000447182 CUL2Q13617 745 aa20.19■□□□□ 0.82
SDCBP-204ENST00000447182 MORF4L2Q15014 288 aa20.19■□□□□ 0.82
SDCBP-204ENST00000447182 SPDYAQ5MJ70 313 aa20.19■□□□□ 0.82
SDCBP-204ENST00000447182 TDRD10Q5VZ19 366 aaKnown RBP20.19■□□□□ 0.82
SDCBP-204ENST00000447182 RSBN1LQ6PCB5 846 aaPredicted RBP20.19■□□□□ 0.82
SDCBP-204ENST00000447182 CDAN1Q8IWY9 1227 aa20.19■□□□□ 0.82
SDCBP-204ENST00000447182 CPXCR1Q8N123 301 aa20.19■□□□□ 0.82
SDCBP-204ENST00000447182 AGGF1Q8N302 714 aaeCLIP20.19■□□□□ 0.82
SDCBP-204ENST00000447182 ALLCQ8N6M5 410 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms