RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 NACA2Q9H009 215 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 TRAF3IP3Q9Y228 551 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 SDK1Q7Z5N4 2213 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 UBE4BO95155 1302 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 CUL9Q8IWT3 2517 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 TAP1Q03518 808 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 USP41Q3LFD5 358 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 SV2CQ496J9 727 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 IFNLR1Q8IU57 520 aaPredicted RBP11.04□□□□□ -0.64
LIN54-203ENST00000446851 PHOSPHO2Q8TCD6 241 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 DDX27Q96GQ7 796 aaKnown RBP11.04□□□□□ -0.64
LIN54-203ENST00000446851 GTF3C4Q9UKN8 822 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 PCDHA11Q9Y5I1 949 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 SCN5AQ14524 2016 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 GOLGA6L6A8MZA4 724 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 KIAA0391O15091 583 aaKnown RBP11.04□□□□□ -0.64
LIN54-203ENST00000446851 PNMA6AP0CW24 399 aaPredicted RBP11.04□□□□□ -0.64
LIN54-203ENST00000446851 SLC9A1P19634 815 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 FANCCQ00597 558 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 TIGD5Q53EQ6 642 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 TCP11X2Q5H9J9 407 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 TMC5Q6UXY8 1006 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 COLGALT1Q8NBJ5 622 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 CGRRF1Q99675 332 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 TTPALQ9BTX7 342 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 ST6GALNAC4Q9H4F1 302 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 RAB20Q9NX57 234 aa11.04□□□□□ -0.64
LIN54-203ENST00000446851 CGNQ9P2M7 1197 aaKnown RBP11.04□□□□□ -0.64
LIN54-203ENST00000446851 SOX1O00570 391 aaPredicted RBP11.03□□□□□ -0.64
LIN54-203ENST00000446851 FMO5P49326 533 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 PSMD5Q16401 504 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 CBWD6Q4V339 395 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 CBWD3Q5JTY5 395 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 CBWD5Q5RIA9 395 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 CRELD2Q6UXH1 353 aaPredicted RBP11.03□□□□□ -0.64
LIN54-203ENST00000446851 ACOT1Q86TX2 421 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 ENOX1Q8TC92 643 aaKnown RBP11.03□□□□□ -0.64
LIN54-203ENST00000446851 CEP63Q96MT8 703 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 DDX43Q9NXZ2 648 aaKnown RBP11.03□□□□□ -0.64
LIN54-203ENST00000446851 ZMYM2Q9UBW7 1377 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 TMCO5BA8MYB1 307 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 HCRTO43612 131 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 B4GALT3O60512 393 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 CALCAP01258 141 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 ODC1P11926 461 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 IRS1P35568 1242 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 GNL1P36915 607 aaPredicted RBP11.03□□□□□ -0.64
LIN54-203ENST00000446851 RBM10P98175 930 aaKnown RBP11.03□□□□□ -0.64
LIN54-203ENST00000446851 MAN2A1Q16706 1144 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 SDHAF4Q5VUM1 108 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 TDRD10Q5VZ19 366 aaKnown RBP11.03□□□□□ -0.64
LIN54-203ENST00000446851 C9orf57Q5W0N0 161 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 DCLRE1AQ6PJP8 1040 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 LRRC55Q6ZSA7 311 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 TAS1R1Q7RTX1 841 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 TMC6Q7Z403 805 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 WDR49Q8IV35 697 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 C12orf76Q8N812 135 aaPredicted RBP11.03□□□□□ -0.64
LIN54-203ENST00000446851 TATDN2Q93075 761 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 IGSF21Q96ID5 467 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 DEF6Q9H4E7 631 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 PTPRHQ9HD43 1115 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 KCNA5P22460 613 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 COPB1P53618 953 aaKnown RBP11.03□□□□□ -0.64
LIN54-203ENST00000446851 LILRA4P59901 499 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 RBL2Q08999 1139 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 PHLDB2Q86SQ0 1253 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 CD302Q8IX05 232 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 ADGRF2Q8IZF7 708 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 PLEKHA5Q9HAU0 1116 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 TLR9Q9NR96 1032 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 PTPRJQ12913 1337 aa11.03□□□□□ -0.64
LIN54-203ENST00000446851 SCP2P22307 547 aa11.02□□□□□ -0.64
LIN54-203ENST00000446851 GLUD2P49448 558 aa11.02□□□□□ -0.64
LIN54-203ENST00000446851 PDE4CQ08493 712 aa11.02□□□□□ -0.64
LIN54-203ENST00000446851 PSMD6Q15008 389 aa11.02□□□□□ -0.64
LIN54-203ENST00000446851 SLC39A12Q504Y0 691 aa11.02□□□□□ -0.64
LIN54-203ENST00000446851 SCARA3Q6AZY7 606 aa11.02□□□□□ -0.64
LIN54-203ENST00000446851 ATAD1Q8NBU5 361 aa11.02□□□□□ -0.64
LIN54-203ENST00000446851 STKLD1Q8NE28 680 aa11.02□□□□□ -0.64
LIN54-203ENST00000446851 ARID3AQ99856 593 aa11.02□□□□□ -0.64
LIN54-203ENST00000446851 RBSNQ9H1K0 784 aa11.02□□□□□ -0.64
LIN54-203ENST00000446851 SOAT2O75908 522 aa11.02□□□□□ -0.65
LIN54-203ENST00000446851 GRIK1P39086 918 aa11.02□□□□□ -0.65
LIN54-203ENST00000446851 SGSM1Q2NKQ1 1148 aa11.02□□□□□ -0.65
LIN54-203ENST00000446851 VWA3BQ502W6 1294 aa11.02□□□□□ -0.65
LIN54-203ENST00000446851 ZFYVE27Q5T4F4 411 aa11.02□□□□□ -0.65
LIN54-203ENST00000446851 ZNF598Q86UK7 904 aaKnown RBP11.02□□□□□ -0.65
LIN54-203ENST00000446851 PASD1Q8IV76 773 aa11.02□□□□□ -0.65
LIN54-203ENST00000446851 DNAI2Q9GZS0 605 aa11.02□□□□□ -0.65
LIN54-203ENST00000446851 SMYD3Q9H7B4 428 aa11.02□□□□□ -0.65
LIN54-203ENST00000446851 RGS19P49795 217 aa11.02□□□□□ -0.65
LIN54-203ENST00000446851 KLK7P49862 253 aa11.02□□□□□ -0.65
LIN54-203ENST00000446851 EHHADHQ08426 723 aa11.02□□□□□ -0.65
LIN54-203ENST00000446851 ZNF280DQ6N043 979 aa11.02□□□□□ -0.65
LIN54-203ENST00000446851 CMTR2Q8IYT2 770 aaKnown RBP11.02□□□□□ -0.65
LIN54-203ENST00000446851 C3orf58Q8NDZ4 430 aa11.02□□□□□ -0.65
LIN54-203ENST00000446851 ELAC1Q9H777 363 aaKnown RBP11.02□□□□□ -0.65
LIN54-203ENST00000446851 MYH11P35749 1972 aa11.02□□□□□ -0.65
LIN54-203ENST00000446851 GTF2F1P35269 517 aaKnown RBP eCLIP11.01□□□□□ -0.655e-7■■■■■ 29.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms