RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 UBA6A0AVT1 1052 aaPredicted RBP8.97□□□□□ -0.97
PTPN3-204ENST00000446349 LRRC53A6NM62 1247 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 NMT2O60551 498 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 AKT1P31749 480 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 TRIM48Q8IWZ4 208 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 SHCBP1Q8NEM2 672 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 COG4Q9H9E3 785 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 EEF2KO00418 725 aaKnown RBP8.97□□□□□ -0.97
PTPN3-204ENST00000446349 IL1R1P14778 569 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 HMOX2P30519 316 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 C11orf57Q6ZUT1 292 aaPredicted RBP8.97□□□□□ -0.97
PTPN3-204ENST00000446349 UNC45BQ8IWX7 931 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 NAT9Q9BTE0 207 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 TMEM39BQ9GZU3 492 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 KIAA1683Q9H0B3 1180 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 ZFATQ9P243 1243 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 PRPF4O43172 522 aaKnown RBP eCLIP8.97□□□□□ -0.97
PTPN3-204ENST00000446349 H2AFYO75367 372 aaKnown RBP8.97□□□□□ -0.97
PTPN3-204ENST00000446349 THP07101 528 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 TCF7P36402 384 aaPredicted RBP8.97□□□□□ -0.97
PTPN3-204ENST00000446349 FDFT1P37268 417 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 CLNS1AP54105 237 aaKnown RBP8.97□□□□□ -0.97
PTPN3-204ENST00000446349 TGM3Q08188 693 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 ACBD5Q5T8D3 534 aaPredicted RBP8.97□□□□□ -0.97
PTPN3-204ENST00000446349 ANKRD23Q86SG2 305 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 CATSPER1Q8NEC5 780 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 VPS37AQ8NEZ2 397 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 GOLPH3LQ9H4A5 285 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 TUBE1Q9UJT0 475 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 MOCS2O96007 188 aaPredicted RBP8.97□□□□□ -0.97
PTPN3-204ENST00000446349 OCM2P0CE71 109 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 OCMP0CE72 109 aaPredicted RBP8.97□□□□□ -0.97
PTPN3-204ENST00000446349 RAG1P15918 1043 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 IQSEC1Q6DN90 963 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 DPF3Q92784 378 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 SPTLC3Q9NUV7 552 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 A0A1W2PQJ5 194 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 ALDH2P05091 517 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 PDGFRAP16234 1089 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 KRT72Q14CN4 511 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 ZNF438Q7Z4V0 828 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 SYT2Q8N9I0 419 aaPredicted RBP8.97□□□□□ -0.97
PTPN3-204ENST00000446349 EEF2KMTQ96G04 330 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 KCNH7Q9NS40 1196 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 GTSE1Q9NYZ3 720 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 TRPM5Q9NZQ8 1165 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 ZBTB12Q9Y330 459 aaPredicted RBP8.97□□□□□ -0.97
PTPN3-204ENST00000446349 RASA4BC9J798 803 aa8.96□□□□□ -0.97
PTPN3-204ENST00000446349 NCAM2O15394 837 aa8.96□□□□□ -0.97
PTPN3-204ENST00000446349 RASA4O43374 803 aa8.96□□□□□ -0.97
PTPN3-204ENST00000446349 KRT14P02533 472 aa8.96□□□□□ -0.97
PTPN3-204ENST00000446349 CDH2P19022 906 aaPredicted RBP8.96□□□□□ -0.97
PTPN3-204ENST00000446349 RPS6P62753 249 aaKnown RBP8.96□□□□□ -0.97
PTPN3-204ENST00000446349 PPIL2Q13356 520 aa8.96□□□□□ -0.97
PTPN3-204ENST00000446349 CDH18Q13634 790 aa8.96□□□□□ -0.97
PTPN3-204ENST00000446349 ZSCAN26Q16670 478 aa8.96□□□□□ -0.97
PTPN3-204ENST00000446349 HP1BP3Q5SSJ5 553 aaPredicted RBP8.96□□□□□ -0.97
PTPN3-204ENST00000446349 KRT80Q6KB66 452 aa8.96□□□□□ -0.97
PTPN3-204ENST00000446349 INTS5Q6P9B9 1019 aaKnown RBP8.96□□□□□ -0.97
PTPN3-204ENST00000446349 METTL7BQ6UX53 244 aa8.96□□□□□ -0.97
PTPN3-204ENST00000446349 NCLNQ969V3 563 aa8.96□□□□□ -0.97
PTPN3-204ENST00000446349 PRPF18Q99633 342 aaKnown RBP8.96□□□□□ -0.97
PTPN3-204ENST00000446349 TPX2Q9ULW0 747 aaKnown RBP8.96□□□□□ -0.97
PTPN3-204ENST00000446349 KRT87PA6NCN2 255 aa8.96□□□□□ -0.97
PTPN3-204ENST00000446349 SOWAHDA6NJG2 315 aa8.96□□□□□ -0.97
PTPN3-204ENST00000446349 RTN3O95197 1032 aaPredicted RBP8.96□□□□□ -0.97
PTPN3-204ENST00000446349 E4F1Q66K89 784 aaPredicted RBP8.96□□□□□ -0.97
PTPN3-204ENST00000446349 SZRD1Q7Z422 152 aa8.96□□□□□ -0.97
PTPN3-204ENST00000446349 TXNRD3Q86VQ6 643 aa8.96□□□□□ -0.97
PTPN3-204ENST00000446349 SEZ6LQ9BYH1 1024 aa8.96□□□□□ -0.97
PTPN3-204ENST00000446349 AKAP7Q9P0M2 348 aaPredicted RBP8.96□□□□□ -0.97
PTPN3-204ENST00000446349 SMG5Q9UPR3 1016 aaKnown RBP8.96□□□□□ -0.97
PTPN3-204ENST00000446349 F5H5T6 163 aa8.96□□□□□ -0.97
PTPN3-204ENST00000446349 CTSHP09668 335 aa8.96□□□□□ -0.97
PTPN3-204ENST00000446349 ATP1A2P50993 1020 aa8.96□□□□□ -0.97
PTPN3-204ENST00000446349 RENBPP51606 427 aa8.96□□□□□ -0.97
PTPN3-204ENST00000446349 RBBP7Q16576 425 aa8.96□□□□□ -0.97
PTPN3-204ENST00000446349 KHDRBS2Q5VWX1 349 aaKnown RBP8.96□□□□□ -0.97
PTPN3-204ENST00000446349 DSG4Q86SJ6 1040 aa8.96□□□□□ -0.97
PTPN3-204ENST00000446349 GPIHBP1Q8IV16 184 aa8.96□□□□□ -0.97
PTPN3-204ENST00000446349 TAB3Q8N5C8 712 aaPredicted RBP8.96□□□□□ -0.97
PTPN3-204ENST00000446349 AIFM3Q96NN9 605 aa8.96□□□□□ -0.97
PTPN3-204ENST00000446349 MSRAQ9UJ68 235 aa8.96□□□□□ -0.97
PTPN3-204ENST00000446349 ARHGAP26Q9UNA1 814 aa8.96□□□□□ -0.97
PTPN3-204ENST00000446349 ARHGEF28Q8N1W1 1705 aaKnown RBP8.96□□□□□ -0.97
PTPN3-204ENST00000446349 C2orf81A6NN90 581 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 UPP2O95045 317 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 NR1D1P20393 614 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 TYK2P29597 1187 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 SREBF1P36956 1147 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 SNCBQ16143 134 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 COL23A1Q86Y22 540 aaPredicted RBP8.96□□□□□ -0.98
PTPN3-204ENST00000446349 CCDC126Q96EE4 140 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 AAR2Q9Y312 384 aaKnown RBP8.96□□□□□ -0.98
PTPN3-204ENST00000446349 NLRP11P59045 1033 aaKnown RBP8.96□□□□□ -0.98
PTPN3-204ENST00000446349 IL1RL1Q01638 556 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 NOGQ13253 232 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 PDIA6Q15084 440 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 TMEM143Q96AN5 459 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 TADA1Q96BN2 335 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms