RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 CXorf38Q8TB03 319 aa12.3□□□□□ -0.44
FN1-212ENST00000446046 VPS11Q9H270 941 aa12.3□□□□□ -0.44
FN1-212ENST00000446046 KLHL11Q9NVR0 708 aa12.3□□□□□ -0.44
FN1-212ENST00000446046 SYF2O95926 243 aaKnown RBP12.3□□□□□ -0.44
FN1-212ENST00000446046 NR1D1P20393 614 aa12.3□□□□□ -0.44
FN1-212ENST00000446046 PAX3P23760 479 aa12.3□□□□□ -0.44
FN1-212ENST00000446046 TYK2P29597 1187 aa12.3□□□□□ -0.44
FN1-212ENST00000446046 ZKSCAN8Q15776 578 aaPredicted RBP12.3□□□□□ -0.44
FN1-212ENST00000446046 PPP4R4Q6NUP7 873 aa12.3□□□□□ -0.44
FN1-212ENST00000446046 AP1M1Q9BXS5 423 aa12.3□□□□□ -0.44
FN1-212ENST00000446046 FAM32AQ9Y421 112 aaKnown RBP12.3□□□□□ -0.44
FN1-212ENST00000446046 ZNF638Q14966 1978 aaKnown RBP12.3□□□□□ -0.44
FN1-212ENST00000446046 FAM208AQ9UK61 1670 aaKnown RBP12.3□□□□□ -0.44
FN1-212ENST00000446046 SPDYE5A6NIY4 337 aa12.3□□□□□ -0.44
FN1-212ENST00000446046 FAM47E-STBD1D6RA91 191 aa12.3□□□□□ -0.44
FN1-212ENST00000446046 ILF2Q12905 390 aaKnown RBP12.3□□□□□ -0.44
FN1-212ENST00000446046 SPDYE7PQ495Y7 208 aa12.3□□□□□ -0.44
FN1-212ENST00000446046 KCTD16Q68DU8 428 aa12.3□□□□□ -0.44
FN1-212ENST00000446046 TRMT10CQ7L0Y3 403 aaKnown RBP12.3□□□□□ -0.44
FN1-212ENST00000446046 EFL1Q7Z2Z2 1120 aaKnown RBP12.3□□□□□ -0.44
FN1-212ENST00000446046 PDIA6Q15084 440 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 SPDYAQ5MJ70 313 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 PTRHD1Q6GMV3 140 aaKnown RBP12.29□□□□□ -0.44
FN1-212ENST00000446046 LRRC8BQ6P9F7 803 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 ZNF557Q8N988 423 aaPredicted RBP12.29□□□□□ -0.44
FN1-212ENST00000446046 TTC17Q96AE7 1141 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 C7orf25Q9BPX7 421 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 SPAG6O75602 509 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 DPEP1P16444 411 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 C10orf120Q5SQS8 335 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 MB21D2Q8IYB1 491 aaPredicted RBP12.29□□□□□ -0.44
FN1-212ENST00000446046 KRCC1Q9NPI7 259 aaPredicted RBP12.29□□□□□ -0.44
FN1-212ENST00000446046 H0Y626 953 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 NCALDP61601 193 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 TP53BP2Q13625 1128 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 SPATA17Q96L03 361 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 PITPNM2Q9BZ72 1349 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.29□□□□□ -0.44
FN1-212ENST00000446046 ANO9A1A5B4 782 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 RSPH10B2B2RC85 870 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 ATP1A1P05023 1023 aaKnown RBP12.29□□□□□ -0.44
FN1-212ENST00000446046 RSPH10BP0C881 870 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 RAB27AP51159 221 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 ZNF177Q13360 481 aaPredicted RBP12.29□□□□□ -0.44
FN1-212ENST00000446046 AARS2Q5JTZ9 985 aaKnown RBP12.29□□□□□ -0.44
FN1-212ENST00000446046 SYT2Q8N9I0 419 aaPredicted RBP12.29□□□□□ -0.44
FN1-212ENST00000446046 VPS37AQ8NEZ2 397 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 MTG1Q9BT17 334 aaPredicted RBP12.29□□□□□ -0.44
FN1-212ENST00000446046 TMEM39BQ9GZU3 492 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 FAF1Q9UNN5 650 aaPredicted RBP12.29□□□□□ -0.44
FN1-212ENST00000446046 CCDC78A2IDD5 438 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 C2orf81A6NN90 581 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 UBXN8O00124 270 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 CCDC22O60826 627 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 LHX1P48742 406 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 SKP1P63208 163 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 TIGD7Q6NT04 549 aaPredicted RBP12.29□□□□□ -0.44
FN1-212ENST00000446046 FRMD8Q9BZ67 464 aaPredicted RBP12.29□□□□□ -0.44
FN1-212ENST00000446046 GOLPH3LQ9H4A5 285 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 PDE11AQ9HCR9 933 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 TMEM260Q9NX78 707 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 WDR91A4D1P6 747 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 EEF1DP29692 281 aaKnown RBP12.29□□□□□ -0.44
FN1-212ENST00000446046 HIST2H2ACQ16777 129 aaPredicted RBP12.29□□□□□ -0.44
FN1-212ENST00000446046 HIST2H2AA3Q6FI13 130 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 RNF135Q8IUD6 432 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 TMEM143Q96AN5 459 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 GRAMD1AQ96CP6 724 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 KLHL29Q96CT2 875 aa12.29□□□□□ -0.44
FN1-212ENST00000446046 E9PMD0 336 aa12.28□□□□□ -0.44
FN1-212ENST00000446046 CFLARO15519 480 aa12.28□□□□□ -0.44
FN1-212ENST00000446046 APRTP07741 180 aa12.28□□□□□ -0.44
FN1-212ENST00000446046 IFT88Q13099 833 aa12.28□□□□□ -0.44
FN1-212ENST00000446046 TAGAPQ8N103 731 aa12.28□□□□□ -0.44
FN1-212ENST00000446046 LRRC43Q8N309 656 aa12.28□□□□□ -0.44
FN1-212ENST00000446046 LATS2Q9NRM7 1088 aa12.28□□□□□ -0.44
FN1-212ENST00000446046 CXCL11O14625 94 aa12.28□□□□□ -0.44
FN1-212ENST00000446046 MAP3K13O43283 966 aa12.28□□□□□ -0.44
FN1-212ENST00000446046 BTBD6Q96KE9 485 aa12.28□□□□□ -0.44
FN1-212ENST00000446046 UBXN6Q9BZV1 441 aa12.28□□□□□ -0.44
FN1-212ENST00000446046 RUBCNLQ9H714 662 aa12.28□□□□□ -0.44
FN1-212ENST00000446046 THP07101 528 aa12.28□□□□□ -0.44
FN1-212ENST00000446046 CDH2P19022 906 aaPredicted RBP12.28□□□□□ -0.44
FN1-212ENST00000446046 NAMPTP43490 491 aa12.28□□□□□ -0.44
FN1-212ENST00000446046 CREMQ03060 361 aa12.28□□□□□ -0.44
FN1-212ENST00000446046 SF3A3Q12874 501 aaKnown RBP eCLIP12.28□□□□□ -0.442e-10■■■■□ 26.7
FN1-212ENST00000446046 EDRF1Q3B7T1 1238 aa12.28□□□□□ -0.44
FN1-212ENST00000446046 DCAF6Q58WW2 860 aa12.28□□□□□ -0.44
FN1-212ENST00000446046 CATSPER1Q8NEC5 780 aa12.28□□□□□ -0.44
FN1-212ENST00000446046 SLC20A1Q8WUM9 679 aa12.28□□□□□ -0.44
FN1-212ENST00000446046 AGPAT1Q99943 283 aa12.28□□□□□ -0.44
FN1-212ENST00000446046 AKAP7Q9P0M2 348 aaPredicted RBP12.28□□□□□ -0.44
FN1-212ENST00000446046 PCDHB2Q9Y5E7 798 aa12.28□□□□□ -0.44
FN1-212ENST00000446046 GYG2O15488 501 aa12.28□□□□□ -0.44
FN1-212ENST00000446046 CCDC137Q6PK04 289 aaKnown RBP12.28□□□□□ -0.44
FN1-212ENST00000446046 FBXO33Q7Z6M2 555 aa12.28□□□□□ -0.44
FN1-212ENST00000446046 TACO1Q9BSH4 297 aaKnown RBP12.28□□□□□ -0.44
FN1-212ENST00000446046 CINPQ9BW66 212 aaPredicted RBP12.28□□□□□ -0.44
FN1-212ENST00000446046 ZBTB12Q9Y330 459 aaPredicted RBP12.28□□□□□ -0.44
FN1-212ENST00000446046 GPR75-ASB3A0A0A6YYF3 556 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms