RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 BTG3Q14201 252 aaPredicted RBP16.23■□□□□ 0.19
CCNE1-203ENST00000444983 IQCEQ6IPM2 695 aa16.23■□□□□ 0.19
CCNE1-203ENST00000444983 GJB7Q6PEY0 223 aa16.23■□□□□ 0.19
CCNE1-203ENST00000444983 NEK11Q8NG66 645 aa16.23■□□□□ 0.19
CCNE1-203ENST00000444983 IQCDQ96DY2 449 aa16.23■□□□□ 0.19
CCNE1-203ENST00000444983 RNPC3Q96LT9 517 aaKnown RBP16.23■□□□□ 0.19
CCNE1-203ENST00000444983 ZNF560Q96MR9 790 aa16.23■□□□□ 0.19
CCNE1-203ENST00000444983 KREMEN1Q96MU8 473 aa16.23■□□□□ 0.19
CCNE1-203ENST00000444983 FAM193BQ96PV7 902 aaPredicted RBP16.23■□□□□ 0.19
CCNE1-203ENST00000444983 YME1L1Q96TA2 773 aa16.23■□□□□ 0.19
CCNE1-203ENST00000444983 BCO2Q9BYV7 579 aa16.23■□□□□ 0.19
CCNE1-203ENST00000444983 UBE2OQ9C0C9 1292 aaKnown RBP16.23■□□□□ 0.19
CCNE1-203ENST00000444983 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.23■□□□□ 0.19
CCNE1-203ENST00000444983 MARCH5Q9NX47 278 aa16.23■□□□□ 0.19
CCNE1-203ENST00000444983 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.23■□□□□ 0.19
CCNE1-203ENST00000444983 FHOD1Q9Y613 1164 aa16.23■□□□□ 0.19
CCNE1-203ENST00000444983 MRPL42Q9Y6G3 142 aaKnown RBP16.23■□□□□ 0.19
CCNE1-203ENST00000444983 LAMA3Q16787 3333 aa16.23■□□□□ 0.19
CCNE1-203ENST00000444983 NRP1O14786 923 aa16.22■□□□□ 0.19
CCNE1-203ENST00000444983 B3GAT3O94766 335 aa16.22■□□□□ 0.19
CCNE1-203ENST00000444983 KIF4AO95239 1232 aa16.22■□□□□ 0.19
CCNE1-203ENST00000444983 TRIM21P19474 475 aaKnown RBP16.22■□□□□ 0.19
CCNE1-203ENST00000444983 SLC11A1P49279 550 aa16.22■□□□□ 0.19
CCNE1-203ENST00000444983 ZNF667Q5HYK9 610 aa16.22■□□□□ 0.19
CCNE1-203ENST00000444983 SMYD5Q6GMV2 418 aa16.22■□□□□ 0.19
CCNE1-203ENST00000444983 RRAGAQ7L523 313 aa16.22■□□□□ 0.19
CCNE1-203ENST00000444983 TMC6Q7Z403 805 aa16.22■□□□□ 0.19
CCNE1-203ENST00000444983 UBR7Q8N806 425 aa16.22■□□□□ 0.19
CCNE1-203ENST00000444983 CCDC150Q8NCX0 1101 aa16.22■□□□□ 0.19
CCNE1-203ENST00000444983 BAP1Q92560 729 aa16.22■□□□□ 0.19
CCNE1-203ENST00000444983 CLP1Q92989 425 aaKnown RBP16.22■□□□□ 0.19
CCNE1-203ENST00000444983 KAT5Q92993 513 aa16.22■□□□□ 0.19
CCNE1-203ENST00000444983 JAKMIP2Q96AA8 810 aa16.22■□□□□ 0.19
CCNE1-203ENST00000444983 PCMTD1Q96MG8 357 aaPredicted RBP16.22■□□□□ 0.19
CCNE1-203ENST00000444983 ARID3AQ99856 593 aa16.22■□□□□ 0.19
CCNE1-203ENST00000444983 GPR88Q9GZN0 384 aa16.22■□□□□ 0.19
CCNE1-203ENST00000444983 NIF3L1Q9GZT8 377 aa16.22■□□□□ 0.19
CCNE1-203ENST00000444983 PRO3102Q9H379 93 aa16.22■□□□□ 0.19
CCNE1-203ENST00000444983 UBE2TQ9NPD8 197 aaPredicted RBP16.22■□□□□ 0.19
CCNE1-203ENST00000444983 CEP72Q9P209 647 aa16.22■□□□□ 0.19
CCNE1-203ENST00000444983 DNAJC12Q9UKB3 198 aa16.22■□□□□ 0.19
CCNE1-203ENST00000444983 CAPN11Q9UMQ6 739 aa16.22■□□□□ 0.19
CCNE1-203ENST00000444983 GBF1Q92538 1859 aa16.22■□□□□ 0.19
CCNE1-203ENST00000444983 FXR1P51114 621 aaKnown RBP eCLIP16.21■□□□□ 0.19
CCNE1-203ENST00000444983 BCAR1P56945 870 aa16.21■□□□□ 0.19
CCNE1-203ENST00000444983 JAM2P57087 298 aa16.21■□□□□ 0.19
CCNE1-203ENST00000444983 POLR2FP61218 127 aaKnown RBP16.21■□□□□ 0.19
CCNE1-203ENST00000444983 CUL2Q13617 745 aa16.21■□□□□ 0.19
CCNE1-203ENST00000444983 ARID5BQ14865 1188 aa16.21■□□□□ 0.19
CCNE1-203ENST00000444983 SV2CQ496J9 727 aa16.21■□□□□ 0.19
CCNE1-203ENST00000444983 TIGD5Q53EQ6 642 aa16.21■□□□□ 0.19
CCNE1-203ENST00000444983 FAM109BQ6ICB4 259 aaPredicted RBP16.21■□□□□ 0.19
CCNE1-203ENST00000444983 ENOSF1Q7L5Y1 443 aa16.21■□□□□ 0.19
CCNE1-203ENST00000444983 PPM1KQ8N3J5 372 aa16.21■□□□□ 0.19
CCNE1-203ENST00000444983 FAM81BQ96LP2 452 aa16.21■□□□□ 0.19
CCNE1-203ENST00000444983 STK33Q9BYT3 514 aa16.21■□□□□ 0.19
CCNE1-203ENST00000444983 R3HCC1Q9Y3T6 440 aaKnown RBP16.21■□□□□ 0.19
CCNE1-203ENST00000444983 M0QZQ0 153 aa16.21■□□□□ 0.18
CCNE1-203ENST00000444983 ACO1P21399 889 aaKnown RBP16.21■□□□□ 0.18
CCNE1-203ENST00000444983 TBXAS1P24557 533 aaPredicted RBP16.21■□□□□ 0.18
CCNE1-203ENST00000444983 CASP14P31944 242 aa16.21■□□□□ 0.18
CCNE1-203ENST00000444983 OR1G1P47890 313 aa16.21■□□□□ 0.18
CCNE1-203ENST00000444983 TRIM14Q14142 442 aa16.21■□□□□ 0.18
CCNE1-203ENST00000444983 SOWAHAQ2M3V2 549 aa16.21■□□□□ 0.18
CCNE1-203ENST00000444983 TMEM173Q86WV6 379 aaPredicted RBP16.21■□□□□ 0.18
CCNE1-203ENST00000444983 ZBED2Q9BTP6 218 aa16.21■□□□□ 0.18
CCNE1-203ENST00000444983 SDCBP2Q9H190 292 aa16.21■□□□□ 0.18
CCNE1-203ENST00000444983 FAM124BQ9H5Z6 455 aaPredicted RBP16.21■□□□□ 0.18
CCNE1-203ENST00000444983 IMPACTQ9P2X3 320 aa16.21■□□□□ 0.18
CCNE1-203ENST00000444983 NXF1Q9UBU9 619 aaKnown RBP16.21■□□□□ 0.18
CCNE1-203ENST00000444983 POLIQ9UNA4 740 aa16.21■□□□□ 0.18
CCNE1-203ENST00000444983 CNTN6Q9UQ52 1028 aa16.21■□□□□ 0.18
CCNE1-203ENST00000444983 FAN1Q9Y2M0 1017 aa16.21■□□□□ 0.18
CCNE1-203ENST00000444983 SNX9Q9Y5X1 595 aa16.21■□□□□ 0.18
CCNE1-203ENST00000444983 LCHNA4D1U4 455 aa16.2■□□□□ 0.18
CCNE1-203ENST00000444983 TLL1O43897 1013 aa16.2■□□□□ 0.18
CCNE1-203ENST00000444983 FAM163BP0C2L3 166 aa16.2■□□□□ 0.18
CCNE1-203ENST00000444983 PBX3P40426 434 aa16.2■□□□□ 0.18
CCNE1-203ENST00000444983 KCNT2Q6UVM3 1135 aa16.2■□□□□ 0.18
CCNE1-203ENST00000444983 DPH6Q7L8W6 267 aa16.2■□□□□ 0.18
CCNE1-203ENST00000444983 BCL7CQ8WUZ0 217 aaPredicted RBP16.2■□□□□ 0.18
CCNE1-203ENST00000444983 SHC3Q92529 594 aa16.2■□□□□ 0.18
CCNE1-203ENST00000444983 SUSD3Q96L08 255 aa16.2■□□□□ 0.18
CCNE1-203ENST00000444983 ADAM28Q9UKQ2 775 aa16.2■□□□□ 0.18
CCNE1-203ENST00000444983 MYO6Q9UM54 1294 aa16.2■□□□□ 0.18
CCNE1-203ENST00000444983 PRG3Q9Y2Y8 225 aaPredicted RBP16.2■□□□□ 0.18
CCNE1-203ENST00000444983 CHD9Q3L8U1 2897 aa16.2■□□□□ 0.18
CCNE1-203ENST00000444983 TSC2P49815 1807 aa16.19■□□□□ 0.18
CCNE1-203ENST00000444983 CARNS1A5YM72 827 aa16.19■□□□□ 0.18
CCNE1-203ENST00000444983 GRXCR1A8MXD5 290 aa16.19■□□□□ 0.18
CCNE1-203ENST00000444983 TACC1O75410 805 aa16.19■□□□□ 0.18
CCNE1-203ENST00000444983 P4HA1P13674 534 aa16.19■□□□□ 0.18
CCNE1-203ENST00000444983 BRCC3P46736 316 aa16.19■□□□□ 0.18
CCNE1-203ENST00000444983 ALDH7A1P49419 539 aaKnown RBP16.19■□□□□ 0.18
CCNE1-203ENST00000444983 MFAP3P55082 362 aa16.19■□□□□ 0.18
CCNE1-203ENST00000444983 INCA1Q0VD86 236 aa16.19■□□□□ 0.18
CCNE1-203ENST00000444983 RNF168Q8IYW5 571 aaPredicted RBP16.19■□□□□ 0.18
CCNE1-203ENST00000444983 SLC39A11Q8N1S5 342 aa16.19■□□□□ 0.18
CCNE1-203ENST00000444983 FIBCD1Q8N539 461 aa16.19■□□□□ 0.18
CCNE1-203ENST00000444983 TOP6BLQ8N6T0 577 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms