RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 FAM187BQ17R55 369 aa14.59□□□□□ -0.07
RBM39-216ENST00000444878 ZNF699Q32M78 642 aa14.59□□□□□ -0.07
RBM39-216ENST00000444878 DUSP28Q4G0W2 176 aa14.59□□□□□ -0.07
RBM39-216ENST00000444878 DDX42Q86XP3 938 aaKnown RBP eCLIP14.59□□□□□ -0.072e-6■□□□□ 9.8
RBM39-216ENST00000444878 GOLGA6L1Q8N7Z2 621 aa14.59□□□□□ -0.07
RBM39-216ENST00000444878 UBR7Q8N806 425 aa14.59□□□□□ -0.07
RBM39-216ENST00000444878 EXOC4Q96A65 974 aa14.59□□□□□ -0.07
RBM39-216ENST00000444878 TINF2Q9BSI4 451 aa14.59□□□□□ -0.07
RBM39-216ENST00000444878 ZHX1Q9UKY1 873 aaPredicted RBP14.59□□□□□ -0.07
RBM39-216ENST00000444878 MROH7Q68CQ1 1323 aa14.58□□□□□ -0.07
RBM39-216ENST00000444878 GPR25O00155 361 aa14.58□□□□□ -0.08
RBM39-216ENST00000444878 DAPK3O43293 454 aa14.58□□□□□ -0.08
RBM39-216ENST00000444878 SMPD1P17405 629 aa14.58□□□□□ -0.08
RBM39-216ENST00000444878 DR1Q01658 176 aa14.58□□□□□ -0.08
RBM39-216ENST00000444878 TNFAIP2Q03169 654 aa14.58□□□□□ -0.08
RBM39-216ENST00000444878 ACVR2BQ13705 512 aa14.58□□□□□ -0.08
RBM39-216ENST00000444878 MTHFD1LQ6UB35 978 aa14.58□□□□□ -0.08
RBM39-216ENST00000444878 MREGQ8N565 214 aa14.58□□□□□ -0.08
RBM39-216ENST00000444878 LINC01465Q8N7H1 131 aa14.58□□□□□ -0.08
RBM39-216ENST00000444878 VCPIP1Q96JH7 1222 aa14.58□□□□□ -0.08
RBM39-216ENST00000444878 PTPN18Q99952 460 aa14.58□□□□□ -0.08
RBM39-216ENST00000444878 PLVAPQ9BX97 442 aa14.58□□□□□ -0.08
RBM39-216ENST00000444878 RAB17Q9H0T7 212 aa14.58□□□□□ -0.08
RBM39-216ENST00000444878 MRPL47Q9HD33 250 aaKnown RBP14.58□□□□□ -0.08
RBM39-216ENST00000444878 CISHQ9NSE2 258 aa14.58□□□□□ -0.08
RBM39-216ENST00000444878 BHMG1C9JSJ3 638 aaPredicted RBP14.57□□□□□ -0.08
RBM39-216ENST00000444878 OPA1O60313 960 aa14.57□□□□□ -0.08
RBM39-216ENST00000444878 ZEB2O60315 1214 aa14.57□□□□□ -0.08
RBM39-216ENST00000444878 SLC1A1P43005 524 aa14.57□□□□□ -0.08
RBM39-216ENST00000444878 PPFIA1Q13136 1202 aa14.57□□□□□ -0.08
RBM39-216ENST00000444878 ZNF394Q53GI3 561 aa14.57□□□□□ -0.08
RBM39-216ENST00000444878 LLGL2Q6P1M3 1020 aa14.57□□□□□ -0.08
RBM39-216ENST00000444878 PHF13Q86YI8 300 aaPredicted RBP14.57□□□□□ -0.08
RBM39-216ENST00000444878 TMEM192Q8IY95 271 aa14.57□□□□□ -0.08
RBM39-216ENST00000444878 OR6J1Q8NGC5 347 aa14.57□□□□□ -0.08
RBM39-216ENST00000444878 SCLT1Q96NL6 688 aa14.57□□□□□ -0.08
RBM39-216ENST00000444878 FAM204AQ9H8W3 233 aa14.57□□□□□ -0.08
RBM39-216ENST00000444878 PHF2O75151 1096 aa14.57□□□□□ -0.08
RBM39-216ENST00000444878 MMP3P08254 477 aa14.57□□□□□ -0.08
RBM39-216ENST00000444878 KRT19P08727 400 aa14.57□□□□□ -0.08
RBM39-216ENST00000444878 WEE2P0C1S8 567 aa14.57□□□□□ -0.08
RBM39-216ENST00000444878 STAG3L1P0CL83 205 aa14.57□□□□□ -0.08
RBM39-216ENST00000444878 MCF2P10911 925 aa14.57□□□□□ -0.08
RBM39-216ENST00000444878 ECHS1P30084 290 aa14.57□□□□□ -0.08
RBM39-216ENST00000444878 DHX34Q14147 1143 aaKnown RBP14.57□□□□□ -0.08
RBM39-216ENST00000444878 CFAP58Q5T655 872 aa14.57□□□□□ -0.08
RBM39-216ENST00000444878 SCARA5Q6ZMJ2 495 aa14.57□□□□□ -0.08
RBM39-216ENST00000444878 MMS22LQ6ZRQ5 1243 aa14.57□□□□□ -0.08
RBM39-216ENST00000444878 SLC13A5Q86YT5 568 aaPredicted RBP14.57□□□□□ -0.08
RBM39-216ENST00000444878 NLRP7Q8WX94 980 aa14.57□□□□□ -0.08
RBM39-216ENST00000444878 MAGOHBQ96A72 148 aaKnown RBP14.57□□□□□ -0.08
RBM39-216ENST00000444878 TRIM7Q9C029 511 aa14.57□□□□□ -0.08
RBM39-216ENST00000444878 FAM114A2Q9NRY5 505 aa14.57□□□□□ -0.08
RBM39-216ENST00000444878 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.57□□□□□ -0.082e-6■■■□□ 18.8
RBM39-216ENST00000444878 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.57□□□□□ -0.08
RBM39-216ENST00000444878 MTUS1Q9ULD2 1270 aa14.57□□□□□ -0.08
RBM39-216ENST00000444878 CHRNA3P32297 505 aa14.56□□□□□ -0.08
RBM39-216ENST00000444878 C1QBPQ07021 282 aaKnown RBP14.56□□□□□ -0.08
RBM39-216ENST00000444878 GRIK4Q16099 956 aa14.56□□□□□ -0.08
RBM39-216ENST00000444878 AMHR2Q16671 573 aa14.56□□□□□ -0.08
RBM39-216ENST00000444878 DGKDQ16760 1214 aa14.56□□□□□ -0.08
RBM39-216ENST00000444878 KCTD19Q17RG1 926 aaPredicted RBP14.56□□□□□ -0.08
RBM39-216ENST00000444878 IQSEC1Q6DN90 963 aa14.56□□□□□ -0.08
RBM39-216ENST00000444878 PRELID2Q8N945 189 aa14.56□□□□□ -0.08
RBM39-216ENST00000444878 NPLOC4Q8TAT6 608 aa14.56□□□□□ -0.08
RBM39-216ENST00000444878 SEC14L1Q92503 715 aa14.56□□□□□ -0.08
RBM39-216ENST00000444878 CPB2Q96IY4 423 aa14.56□□□□□ -0.08
RBM39-216ENST00000444878 ZIM3Q96PE6 472 aa14.56□□□□□ -0.08
RBM39-216ENST00000444878 TRIM51Q9BSJ1 452 aa14.56□□□□□ -0.08
RBM39-216ENST00000444878 XYLT2Q9H1B5 865 aa14.56□□□□□ -0.08
RBM39-216ENST00000444878 DPH5Q9H2P9 285 aa14.56□□□□□ -0.08
RBM39-216ENST00000444878 RRAGCQ9HB90 399 aa14.56□□□□□ -0.08
RBM39-216ENST00000444878 SLC5A4Q9NY91 659 aa14.56□□□□□ -0.08
RBM39-216ENST00000444878 NXF1Q9UBU9 619 aaKnown RBP14.56□□□□□ -0.08
RBM39-216ENST00000444878 SCINQ9Y6U3 715 aa14.56□□□□□ -0.08
RBM39-216ENST00000444878 FAM187AA6NFU0 413 aa14.56□□□□□ -0.08
RBM39-216ENST00000444878 ARF4P18085 180 aaPredicted RBP14.56□□□□□ -0.08
RBM39-216ENST00000444878 CYP2C19P33261 490 aa14.56□□□□□ -0.08
RBM39-216ENST00000444878 ASPAP45381 313 aa14.56□□□□□ -0.08
RBM39-216ENST00000444878 YWHAEP62258 255 aaKnown RBP14.56□□□□□ -0.08
RBM39-216ENST00000444878 LRRC45Q96CN5 670 aa14.56□□□□□ -0.08
RBM39-216ENST00000444878 C18orf8Q96DM3 657 aa14.56□□□□□ -0.08
RBM39-216ENST00000444878 TRIM31Q9BZY9 425 aa14.56□□□□□ -0.08
RBM39-216ENST00000444878 PDZD7Q9H5P4 517 aa14.56□□□□□ -0.08
RBM39-216ENST00000444878 RASAL2Q9UJF2 1139 aa14.56□□□□□ -0.08
RBM39-216ENST00000444878 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.56□□□□□ -0.08
RBM39-216ENST00000444878 SLC15A5A6NIM6 579 aa14.55□□□□□ -0.08
RBM39-216ENST00000444878 LACTBL1A8MY62 500 aa14.55□□□□□ -0.08
RBM39-216ENST00000444878 ERLIN2O94905 339 aa14.55□□□□□ -0.08
RBM39-216ENST00000444878 MYCNP04198 464 aaPredicted RBP14.55□□□□□ -0.08
RBM39-216ENST00000444878 NFICP08651 508 aa14.55□□□□□ -0.08
RBM39-216ENST00000444878 HSPA9P38646 679 aaKnown RBP14.55□□□□□ -0.08
RBM39-216ENST00000444878 LMAN1P49257 510 aa14.55□□□□□ -0.08
RBM39-216ENST00000444878 MAMLD1Q13495 774 aa14.55□□□□□ -0.08
RBM39-216ENST00000444878 ZNF667Q5HYK9 610 aa14.55□□□□□ -0.08
RBM39-216ENST00000444878 PLEKHA7Q6IQ23 1121 aa14.55□□□□□ -0.08
RBM39-216ENST00000444878 IQCKQ8N0W5 287 aa14.55□□□□□ -0.08
RBM39-216ENST00000444878 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.55□□□□□ -0.08
RBM39-216ENST00000444878 SH3GL2Q99962 352 aa14.55□□□□□ -0.08
RBM39-216ENST00000444878 ERP44Q9BS26 406 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms