RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 ASPAP45381 313 aa10.18□□□□□ -0.78
SMPD4P1-203ENST00000443839 MYO1EQ12965 1108 aa10.18□□□□□ -0.78
SMPD4P1-203ENST00000443839 NAB2Q15742 525 aa10.18□□□□□ -0.78
SMPD4P1-203ENST00000443839 ZBTB6Q15916 424 aa10.18□□□□□ -0.78
SMPD4P1-203ENST00000443839 C10orf76Q5T2E6 689 aa10.18□□□□□ -0.78
SMPD4P1-203ENST00000443839 TAF3Q5VWG9 929 aa10.18□□□□□ -0.78
SMPD4P1-203ENST00000443839 ZNF662Q6ZS27 426 aa10.18□□□□□ -0.78
SMPD4P1-203ENST00000443839 NOP9Q86U38 636 aaKnown RBP10.18□□□□□ -0.78
SMPD4P1-203ENST00000443839 RPUSD2Q8IZ73 545 aaKnown RBP10.18□□□□□ -0.78
SMPD4P1-203ENST00000443839 HS6ST3Q8IZP7 471 aa10.18□□□□□ -0.78
SMPD4P1-203ENST00000443839 CXorf38Q8TB03 319 aa10.18□□□□□ -0.78
SMPD4P1-203ENST00000443839 ZFP42Q96MM3 310 aa10.18□□□□□ -0.78
SMPD4P1-203ENST00000443839 TSPAN18Q96SJ8 248 aa10.18□□□□□ -0.78
SMPD4P1-203ENST00000443839 SYT11Q9BT88 431 aa10.18□□□□□ -0.78
SMPD4P1-203ENST00000443839 IRX2Q9BZI1 471 aaPredicted RBP10.18□□□□□ -0.78
SMPD4P1-203ENST00000443839 LACRTQ9GZZ8 138 aa10.18□□□□□ -0.78
SMPD4P1-203ENST00000443839 CRISPLD2Q9H0B8 497 aa10.18□□□□□ -0.78
SMPD4P1-203ENST00000443839 DNAI1Q9UI46 699 aa10.18□□□□□ -0.78
SMPD4P1-203ENST00000443839 NOCTQ9UK39 431 aaKnown RBP10.18□□□□□ -0.78
SMPD4P1-203ENST00000443839 POLIQ9UNA4 740 aa10.18□□□□□ -0.78
SMPD4P1-203ENST00000443839 MACROD2A1Z1Q3 448 aa10.17□□□□□ -0.78
SMPD4P1-203ENST00000443839 MGEA5O60502 916 aa10.17□□□□□ -0.78
SMPD4P1-203ENST00000443839 CD4P01730 458 aa10.17□□□□□ -0.78
SMPD4P1-203ENST00000443839 MLH1P40692 756 aa10.17□□□□□ -0.78
SMPD4P1-203ENST00000443839 CTCFP49711 727 aaPredicted RBP10.17□□□□□ -0.78
SMPD4P1-203ENST00000443839 YWHAEP62258 255 aaKnown RBP10.17□□□□□ -0.78
SMPD4P1-203ENST00000443839 TNNC1P63316 161 aa10.17□□□□□ -0.78
SMPD4P1-203ENST00000443839 MBTPS1Q14703 1052 aa10.17□□□□□ -0.78
SMPD4P1-203ENST00000443839 XKR4Q5GH76 650 aa10.17□□□□□ -0.78
SMPD4P1-203ENST00000443839 TRAF7Q6Q0C0 670 aa10.17□□□□□ -0.78
SMPD4P1-203ENST00000443839 RBBP8NLQ8NC74 664 aaPredicted RBP10.17□□□□□ -0.78
SMPD4P1-203ENST00000443839 KIF18AQ8NI77 898 aa10.17□□□□□ -0.78
SMPD4P1-203ENST00000443839 LNX1Q8TBB1 728 aaPredicted RBP10.17□□□□□ -0.78
SMPD4P1-203ENST00000443839 LPPQ93052 612 aa10.17□□□□□ -0.78
SMPD4P1-203ENST00000443839 ARMC5Q96C12 935 aa10.17□□□□□ -0.78
SMPD4P1-203ENST00000443839 RPS6KC1Q96S38 1066 aa10.17□□□□□ -0.78
SMPD4P1-203ENST00000443839 CISHQ9NSE2 258 aa10.17□□□□□ -0.78
SMPD4P1-203ENST00000443839 PDCD11Q14690 1871 aaKnown RBP10.17□□□□□ -0.78
SMPD4P1-203ENST00000443839 A0A0U1RQF3 1178 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 MEIS3P2A8K0S8 358 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 TMCO5BA8MYB1 307 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 HSPA1AP0DMV8 641 aaKnown RBP10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 HSPA1BP0DMV9 641 aaKnown RBP10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 SKIP12755 728 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 ATF7P17544 494 aaPredicted RBP10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 CDR2Q01850 454 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 ZNF569Q5MCW4 686 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 SLC30A5Q8TAD4 765 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 FAXDC2Q96IV6 333 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 MMS19Q96T76 1030 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 GAD1Q99259 594 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 TRAIPQ9BWF2 469 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 VRTNQ9H8Y1 702 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 MYO1AQ9UBC5 1043 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 PUF60Q9UHX1 559 aaKnown RBP10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 DUSP10Q9Y6W6 482 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 SCN1AP35498 2009 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 DCDC2CA8MYV0 355 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 PITPNM1O00562 1244 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 ZNF623O75123 536 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 MMEP08473 750 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 H2AFZP0C0S5 128 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 GNA15P30679 374 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 RAP1GAPP47736 663 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 NAP1L1P55209 391 aaKnown RBP10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 DSC3Q14574 896 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 ZNF394Q53GI3 561 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 C9orf57Q5W0N0 161 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 H2AFVQ71UI9 128 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 PALB2Q86YC2 1186 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 LRRC52Q8N7C0 313 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 SECISBP2LQ93073 1101 aaKnown RBP10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 PGBD4Q96DM1 585 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 WDR24Q96S15 920 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 PACSIN1Q9BY11 444 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 BCO2Q9BYV7 579 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 SMYD3Q9H7B4 428 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 SLC38A7Q9NVC3 462 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 CNTN6Q9UQ52 1028 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 GIT1Q9Y2X7 761 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 PAXBP1Q9Y5B6 917 aa10.16□□□□□ -0.78
SMPD4P1-203ENST00000443839 FAM170AA1A519 330 aa10.15□□□□□ -0.78
SMPD4P1-203ENST00000443839 ARL5CA6NH57 179 aa10.15□□□□□ -0.78
SMPD4P1-203ENST00000443839 PTGESO14684 152 aa10.15□□□□□ -0.78
SMPD4P1-203ENST00000443839 PPEF2O14830 753 aa10.15□□□□□ -0.78
SMPD4P1-203ENST00000443839 PJA2O43164 708 aa10.15□□□□□ -0.78
SMPD4P1-203ENST00000443839 STAU1O95793 577 aaKnown RBP10.15□□□□□ -0.78
SMPD4P1-203ENST00000443839 CALCAP01258 141 aa10.15□□□□□ -0.78
SMPD4P1-203ENST00000443839 CHRNB2P17787 502 aa10.15□□□□□ -0.78
SMPD4P1-203ENST00000443839 CYP3A5P20815 502 aa10.15□□□□□ -0.78
SMPD4P1-203ENST00000443839 GJA8P48165 433 aa10.15□□□□□ -0.78
SMPD4P1-203ENST00000443839 MNX1P50219 401 aaPredicted RBP10.15□□□□□ -0.78
SMPD4P1-203ENST00000443839 SLC39A5Q6ZMH5 540 aa10.15□□□□□ -0.78
SMPD4P1-203ENST00000443839 AGMOQ6ZNB7 445 aa10.15□□□□□ -0.78
SMPD4P1-203ENST00000443839 ANKRD33Q7Z3H0 272 aa10.15□□□□□ -0.78
SMPD4P1-203ENST00000443839 MRPL10Q7Z7H8 261 aaKnown RBP10.15□□□□□ -0.78
SMPD4P1-203ENST00000443839 ZNF677Q86XU0 584 aa10.15□□□□□ -0.78
SMPD4P1-203ENST00000443839 DNAAF5Q86Y56 855 aa10.15□□□□□ -0.78
SMPD4P1-203ENST00000443839 UBR7Q8N806 425 aa10.15□□□□□ -0.78
SMPD4P1-203ENST00000443839 OLIG1Q8TAK6 271 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms