RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 OVOS1Q6IE37 1185 aa12.78□□□□□ -0.36
TTC28-203ENST00000442232 SLFN12LQ6IEE8 588 aa12.78□□□□□ -0.36
TTC28-203ENST00000442232 TPRG1Q6ZUI0 275 aa12.78□□□□□ -0.36
TTC28-203ENST00000442232 C1orf210Q8IVY1 113 aa12.78□□□□□ -0.36
TTC28-203ENST00000442232 ELSPBP1Q96BH3 223 aa12.78□□□□□ -0.36
TTC28-203ENST00000442232 CCSER1Q9C0I3 900 aa12.78□□□□□ -0.36
TTC28-203ENST00000442232 HAPLN2Q9GZV7 340 aa12.78□□□□□ -0.36
TTC28-203ENST00000442232 BRD9Q9H8M2 597 aa12.78□□□□□ -0.36
TTC28-203ENST00000442232 ZFP14Q9HCL3 533 aa12.78□□□□□ -0.36
TTC28-203ENST00000442232 MRPS17Q9Y2R5 130 aaKnown RBP12.78□□□□□ -0.36
TTC28-203ENST00000442232 DERAQ9Y315 318 aa12.78□□□□□ -0.36
TTC28-203ENST00000442232 YIPF1Q9Y548 306 aa12.78□□□□□ -0.36
TTC28-203ENST00000442232 TSC2P49815 1807 aa12.78□□□□□ -0.36
TTC28-203ENST00000442232 PATJQ8NI35 1801 aa12.78□□□□□ -0.36
TTC28-203ENST00000442232 PTPRZ1P23471 2315 aaPredicted RBP12.77□□□□□ -0.36
TTC28-203ENST00000442232 RIF1Q5UIP0 2472 aaKnown RBP12.77□□□□□ -0.37
TTC28-203ENST00000442232 A0A0B4J269 797 aa12.77□□□□□ -0.37
TTC28-203ENST00000442232 TULP1O00294 542 aaPredicted RBP12.77□□□□□ -0.37
TTC28-203ENST00000442232 LAMTOR5O43504 91 aa12.77□□□□□ -0.37
TTC28-203ENST00000442232 OAZ2O95190 189 aa12.77□□□□□ -0.37
TTC28-203ENST00000442232 TYMPP19971 482 aa12.77□□□□□ -0.37
TTC28-203ENST00000442232 NMT1P30419 496 aaKnown RBP12.77□□□□□ -0.37
TTC28-203ENST00000442232 DDIT3P35638 169 aa12.77□□□□□ -0.37
TTC28-203ENST00000442232 GUCY2FP51841 1108 aa12.77□□□□□ -0.37
TTC28-203ENST00000442232 GTF2BQ00403 316 aa12.77□□□□□ -0.37
TTC28-203ENST00000442232 GRIN1Q05586 938 aa12.77□□□□□ -0.37
TTC28-203ENST00000442232 PRSS36Q5K4E3 855 aa12.77□□□□□ -0.37
TTC28-203ENST00000442232 ZBTB41Q5SVQ8 909 aa12.77□□□□□ -0.37
TTC28-203ENST00000442232 SPATA1Q5VX52 437 aa12.77□□□□□ -0.37
TTC28-203ENST00000442232 RRAGBQ5VZM2 374 aa12.77□□□□□ -0.37
TTC28-203ENST00000442232 JADE1Q6IE81 842 aa12.77□□□□□ -0.37
TTC28-203ENST00000442232 ZNF852Q6ZMS4 543 aa12.77□□□□□ -0.37
TTC28-203ENST00000442232 RNF19BQ6ZMZ0 732 aa12.77□□□□□ -0.37
TTC28-203ENST00000442232 ADSSL1Q8N142 457 aa12.77□□□□□ -0.37
TTC28-203ENST00000442232 DNASE1L2Q92874 299 aa12.77□□□□□ -0.37
TTC28-203ENST00000442232 HVCN1Q96D96 273 aa12.77□□□□□ -0.37
TTC28-203ENST00000442232 TCEAL4Q96EI5 215 aa12.77□□□□□ -0.37
TTC28-203ENST00000442232 HINFPQ9BQA5 517 aa12.77□□□□□ -0.37
TTC28-203ENST00000442232 OSBPL6Q9BZF3 934 aa12.77□□□□□ -0.37
TTC28-203ENST00000442232 LTB4R2Q9NPC1 389 aa12.77□□□□□ -0.37
TTC28-203ENST00000442232 SPATA6Q9NWH7 488 aaPredicted RBP12.77□□□□□ -0.37
TTC28-203ENST00000442232 SEL1LQ9UBV2 794 aa12.77□□□□□ -0.37
TTC28-203ENST00000442232 CPSF3Q9UKF6 684 aaKnown RBP12.77□□□□□ -0.37
TTC28-203ENST00000442232 DSEQ9UL01 958 aa12.77□□□□□ -0.37
TTC28-203ENST00000442232 EXOC7Q9UPT5 735 aa12.77□□□□□ -0.37
TTC28-203ENST00000442232 TIMM13Q9Y5L4 95 aaPredicted RBP12.77□□□□□ -0.37
TTC28-203ENST00000442232 FAM170BA6NMN3 283 aa12.76□□□□□ -0.37
TTC28-203ENST00000442232 LMNAP02545 664 aaKnown RBP12.76□□□□□ -0.37
TTC28-203ENST00000442232 GAP43P17677 238 aa12.76□□□□□ -0.37
TTC28-203ENST00000442232 AARSP49588 968 aaKnown RBP eCLIP12.76□□□□□ -0.37
TTC28-203ENST00000442232 CUL4AQ13619 759 aa12.76□□□□□ -0.37
TTC28-203ENST00000442232 MYBPC2Q14324 1141 aa12.76□□□□□ -0.37
TTC28-203ENST00000442232 POSTNQ15063 836 aa12.76□□□□□ -0.37
TTC28-203ENST00000442232 ZBTB6Q15916 424 aa12.76□□□□□ -0.37
TTC28-203ENST00000442232 FAM78AQ5JUQ0 283 aa12.76□□□□□ -0.37
TTC28-203ENST00000442232 TANGO2Q6ICL3 276 aa12.76□□□□□ -0.37
TTC28-203ENST00000442232 SV2BQ7L1I2 683 aa12.76□□□□□ -0.37
TTC28-203ENST00000442232 DYMQ7RTS9 669 aa12.76□□□□□ -0.37
TTC28-203ENST00000442232 METTL23Q86XA0 190 aa12.76□□□□□ -0.37
TTC28-203ENST00000442232 YAF2Q8IY57 180 aa12.76□□□□□ -0.37
TTC28-203ENST00000442232 DEPDC1BQ8WUY9 529 aa12.76□□□□□ -0.37
TTC28-203ENST00000442232 POMGNT1Q8WZA1 660 aa12.76□□□□□ -0.37
TTC28-203ENST00000442232 SMARCD2Q92925 531 aa12.76□□□□□ -0.37
TTC28-203ENST00000442232 SENP8Q96LD8 212 aa12.76□□□□□ -0.37
TTC28-203ENST00000442232 PGLYRP2Q96PD5 576 aa12.76□□□□□ -0.37
TTC28-203ENST00000442232 NELL2Q99435 816 aa12.76□□□□□ -0.37
TTC28-203ENST00000442232 DDX23Q9BUQ8 820 aaKnown RBP12.76□□□□□ -0.37
TTC28-203ENST00000442232 TRMT61BQ9BVS5 477 aaKnown RBP12.76□□□□□ -0.37
TTC28-203ENST00000442232 GPR88Q9GZN0 384 aa12.76□□□□□ -0.37
TTC28-203ENST00000442232 ST6GALNAC4Q9H4F1 302 aa12.76□□□□□ -0.37
TTC28-203ENST00000442232 ASB7Q9H672 318 aa12.76□□□□□ -0.37
TTC28-203ENST00000442232 MRPL44Q9H9J2 332 aaKnown RBP12.76□□□□□ -0.37
TTC28-203ENST00000442232 DLGAP2Q9P1A6 1054 aa12.76□□□□□ -0.37
TTC28-203ENST00000442232 AGO2Q9UKV8 859 aaKnown RBP12.76□□□□□ -0.37
TTC28-203ENST00000442232 CLIC4Q9Y696 253 aa12.76□□□□□ -0.37
TTC28-203ENST00000442232 R4GN57 208 aa12.76□□□□□ -0.37
TTC28-203ENST00000442232 TICRRQ7Z2Z1 1910 aa12.76□□□□□ -0.37
TTC28-203ENST00000442232 FANCMQ8IYD8 2048 aa12.76□□□□□ -0.37
TTC28-203ENST00000442232 MAN2B1O00754 1011 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 FAM189A1O60320 539 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 IL18RAPO95256 599 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 FGF19O95750 216 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 ADRB2P07550 413 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 NFICP08651 508 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 OR4Q2P0C623 313 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 SP9P0CG40 484 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 STAT6P42226 847 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 ACOT2P49753 483 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 TAF6P49848 677 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 LILRA4P59901 499 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 CEBPZQ03701 1054 aaKnown RBP12.75□□□□□ -0.37
TTC28-203ENST00000442232 DUSP4Q13115 394 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 GPR17Q13304 367 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 GRM2Q14416 872 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 VEPH1Q14D04 833 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 ZC2HC1CQ53FD0 456 aaPredicted RBP12.75□□□□□ -0.37
TTC28-203ENST00000442232 ARHGAP15Q53QZ3 475 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 C9orf57Q5W0N0 161 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 SLC39A4Q6P5W5 647 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 CCDC73Q6ZRK6 1079 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms