RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 PCDHB4Q9Y5E5 795 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 ACTL7BQ9Y614 415 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 ACOT2P49753 483 aa17.5■□□□□ 0.39
SEMA3B-207ENST00000441915 PRKCEQ02156 737 aa17.5■□□□□ 0.39
SEMA3B-207ENST00000441915 LMNB2Q03252 620 aa17.5■□□□□ 0.39
SEMA3B-207ENST00000441915 MTMR2Q13614 643 aa17.5■□□□□ 0.39
SEMA3B-207ENST00000441915 MPP2Q14168 576 aa17.5■□□□□ 0.39
SEMA3B-207ENST00000441915 GIMAP7Q8NHV1 300 aa17.5■□□□□ 0.39
SEMA3B-207ENST00000441915 JPH1Q9HDC5 661 aaPredicted RBP17.5■□□□□ 0.39
SEMA3B-207ENST00000441915 AGO2Q9UKV8 859 aaKnown RBP17.5■□□□□ 0.39
SEMA3B-207ENST00000441915 AGAP1Q9UPQ3 857 aa17.5■□□□□ 0.39
SEMA3B-207ENST00000441915 WDR81Q562E7 1941 aa17.5■□□□□ 0.39
SEMA3B-207ENST00000441915 VWA5AO00534 786 aa17.5■□□□□ 0.39
SEMA3B-207ENST00000441915 KCNA2P16389 499 aa17.5■□□□□ 0.39
SEMA3B-207ENST00000441915 CD58P19256 250 aa17.5■□□□□ 0.39
SEMA3B-207ENST00000441915 ACO1P21399 889 aaKnown RBP17.5■□□□□ 0.39
SEMA3B-207ENST00000441915 NLRP11P59045 1033 aaKnown RBP17.5■□□□□ 0.39
SEMA3B-207ENST00000441915 PLEKHA7Q6IQ23 1121 aa17.5■□□□□ 0.39
SEMA3B-207ENST00000441915 PPP1R21Q6ZMI0 780 aa17.5■□□□□ 0.39
SEMA3B-207ENST00000441915 MAGEB18Q96M61 343 aa17.5■□□□□ 0.39
SEMA3B-207ENST00000441915 FOXP3Q9BZS1 431 aa17.5■□□□□ 0.39
SEMA3B-207ENST00000441915 RIPK3Q9Y572 518 aa17.5■□□□□ 0.39
SEMA3B-207ENST00000441915 CFHP08603 1231 aa17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 CETPP11597 493 aa17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 E2F5Q15329 346 aa17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 ZKSCAN8Q15776 578 aaPredicted RBP17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 PPP1R2P3Q6NXS1 205 aa17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 PHF13Q86YI8 300 aaPredicted RBP17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 CCDC60Q8IWA6 550 aaPredicted RBP17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 ANKRD35Q8N283 1001 aa17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 ZBED3Q96IU2 234 aaPredicted RBP17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 RBM15Q96T37 977 aaKnown RBP eCLIP17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 ZNRF3Q9ULT6 936 aa17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 KLRC2P26717 231 aa17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 ADCY1Q08828 1119 aa17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 RIPK1Q13546 671 aa17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 P3H1Q32P28 736 aa17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 GALNTL6Q49A17 601 aa17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 ZFYVE27Q5T4F4 411 aa17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 RIBC1Q8N443 379 aaPredicted RBP17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 CEP120Q8N960 986 aa17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 CCHCR1Q8TD31 782 aa17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 SLC9A2Q9UBY0 812 aa17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 RASA4BC9J798 803 aa17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 RASA4O43374 803 aa17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 GJB6O95452 261 aa17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 NF2P35240 595 aa17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 MAGEA4P43358 317 aa17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 WNT7BP56706 349 aa17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 MTERF2Q49AM1 385 aa17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 ZCCHC9Q8N567 271 aaKnown RBP17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 NSUN6Q8TEA1 469 aaKnown RBP17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 ATG4CQ96DT6 458 aa17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 ECT2Q9H8V3 914 aa17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 PARVAQ9NVD7 372 aa17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 RBAKQ9NYW8 714 aaPredicted RBP17.49■□□□□ 0.39
SEMA3B-207ENST00000441915 VNN1O95497 513 aa17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 SSTR3P32745 418 aaPredicted RBP17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 NCALDP61601 193 aa17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 C1QBPQ07021 282 aaKnown RBP17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 NFX1Q12986 1120 aaKnown RBP17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 CYP4F22Q6NT55 531 aa17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 FEZF2Q8TBJ5 459 aa17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 CDHR1Q96JP9 859 aa17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 CFAP57Q96MR6 1250 aa17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 APOBEC3GQ9HC16 384 aaKnown RBP17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 GINM1Q9NU53 330 aa17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 KLHL14Q9P2G3 628 aa17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 MCM8Q9UJA3 840 aa17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 STYXL1Q9Y6J8 313 aa17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 ARID2Q68CP9 1835 aa17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 PTPRJQ12913 1337 aa17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 COL4A5P29400 1685 aa17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 ABHD2P08910 425 aa17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 TBXAS1P24557 533 aaPredicted RBP17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 POLGP54098 1239 aaPredicted RBP17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 ACTR2P61160 394 aa17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 COPS2P61201 443 aa17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 BNIP1Q12981 228 aa17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 ZNF268Q14587 947 aaPredicted RBP17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 CRELD2Q6UXH1 353 aaPredicted RBP17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 NIM1KQ8IY84 436 aa17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 RBBP8NLQ8NC74 664 aaPredicted RBP17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 TBC1D31Q96DN5 1066 aa17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 RXFP1Q9HBX9 757 aa17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 MYOZ2Q9NPC6 264 aa17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 IP6K2Q9UHH9 426 aa17.48■□□□□ 0.39
SEMA3B-207ENST00000441915 LDHAP00338 332 aaKnown RBP17.47■□□□□ 0.39
SEMA3B-207ENST00000441915 NQO1P15559 274 aaKnown RBP17.47■□□□□ 0.39
SEMA3B-207ENST00000441915 IL9RQ01113 521 aa17.47■□□□□ 0.39
SEMA3B-207ENST00000441915 XKR3Q5GH77 459 aa17.47■□□□□ 0.39
SEMA3B-207ENST00000441915 KAZNQ674X7 775 aa17.47■□□□□ 0.39
SEMA3B-207ENST00000441915 SLFN12LQ6IEE8 588 aa17.47■□□□□ 0.39
SEMA3B-207ENST00000441915 SEPT14Q6ZU15 432 aa17.47■□□□□ 0.39
SEMA3B-207ENST00000441915 ANKS1BQ7Z6G8 1248 aa17.47■□□□□ 0.39
SEMA3B-207ENST00000441915 PRUNE1Q86TP1 453 aa17.47■□□□□ 0.39
SEMA3B-207ENST00000441915 GRAMD1AQ96CP6 724 aa17.47■□□□□ 0.39
SEMA3B-207ENST00000441915 KLHL29Q96CT2 875 aa17.47■□□□□ 0.39
SEMA3B-207ENST00000441915 RBM41Q96IZ5 413 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms