RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 CTAGE6Q86UF2 777 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 CTAGE4Q8IX94 777 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 DDI1Q8WTU0 396 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 METTL21AQ8WXB1 218 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 TREX2Q9BQ50 279 aaPredicted RBP11.2□□□□□ -0.62
SYNE2-206ENST00000441438 API5Q9BZZ5 524 aaKnown RBP11.2□□□□□ -0.62
SYNE2-206ENST00000441438 TCF7L1Q9HCS4 588 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 MIS18AQ9NYP9 233 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 GOLGA6L7A0A1B0GV03 622 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 PSMD9O00233 223 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 PPP1R2P41236 205 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 AFF3P51826 1226 aaKnown RBP11.2□□□□□ -0.62
SYNE2-206ENST00000441438 MRPL12P52815 198 aaKnown RBP11.2□□□□□ -0.62
SYNE2-206ENST00000441438 MSLNQ13421 630 aaPredicted RBP11.2□□□□□ -0.62
SYNE2-206ENST00000441438 SNCBQ16143 134 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 XKR3Q5GH77 459 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 TMEM67Q5HYA8 995 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 C1orf185Q5T7R7 199 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 PPP1R2P3Q6NXS1 205 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 JMJD6Q6NYC1 403 aaPredicted RBP11.2□□□□□ -0.62
SYNE2-206ENST00000441438 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.2□□□□□ -0.62
SYNE2-206ENST00000441438 ZBTB38Q8NAP3 1195 aaPredicted RBP11.2□□□□□ -0.62
SYNE2-206ENST00000441438 KIFAP3Q92845 792 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 DTNBP1Q96EV8 351 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 SLC2A13Q96QE2 648 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 LMBRD1Q9NUN5 540 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 NUP188Q5SRE5 1749 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 A0A0G2JS52 829 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 APOL1O14791 398 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 POLR2GP62487 172 aaKnown RBP eCLIP11.19□□□□□ -0.62
SYNE2-206ENST00000441438 OLR1P78380 273 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 IFI35P80217 286 aaPredicted RBP11.19□□□□□ -0.62
SYNE2-206ENST00000441438 ARHGAP8P85298 464 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 ACTN3Q08043 901 aaPredicted RBP11.19□□□□□ -0.62
SYNE2-206ENST00000441438 AAGABQ6PD74 315 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 LRIG3Q6UXM1 1119 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 LRRC31Q6UY01 552 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 KIAA1328Q86T90 577 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 GTF3C6Q969F1 213 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 SAAL1Q96ER3 474 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 RRP36Q96EU6 259 aaKnown RBP11.19□□□□□ -0.62
SYNE2-206ENST00000441438 NLRP4Q96MN2 994 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 TSG101Q99816 390 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 THAP9Q9H5L6 903 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 SYNDIG1Q9H7V2 258 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 STK32BQ9NY57 414 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 GOLGA8SH3BPF8 625 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 ZBTB7BO15156 539 aaPredicted RBP11.19□□□□□ -0.62
SYNE2-206ENST00000441438 SEC22BO75396 215 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 GLAP06280 429 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 HOXD13P35453 343 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 IARSP41252 1262 aaKnown RBP11.19□□□□□ -0.62
SYNE2-206ENST00000441438 CBX5P45973 191 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 ID4P47928 161 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 NOP14P78316 857 aaKnown RBP11.19□□□□□ -0.62
SYNE2-206ENST00000441438 OTUD4Q01804 1114 aaKnown RBP11.19□□□□□ -0.62
SYNE2-206ENST00000441438 GTF2H3Q13889 308 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 INSCQ1MX18 579 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 SPDYE1Q8NFV5 336 aaPredicted RBP11.19□□□□□ -0.62
SYNE2-206ENST00000441438 ART5Q96L15 291 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 SIKE1Q9BRV8 207 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 NTMT1Q9BV86 223 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 ZCWPW1Q9H0M4 648 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 FARSBQ9NSD9 589 aaKnown RBP11.19□□□□□ -0.62
SYNE2-206ENST00000441438 HMG20BQ9P0W2 317 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 ANKRD6Q9Y2G4 727 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 LAMB4A4D0S4 1761 aa11.19□□□□□ -0.62
SYNE2-206ENST00000441438 SPATA31A5Q5VU36 1347 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 SPATA31A7Q8IWB4 1347 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 FOXO6A8MYZ6 492 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 ARHGAP33O14559 1287 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 ALBP02768 609 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 ENO2P09104 434 aaPredicted RBP11.18□□□□□ -0.62
SYNE2-206ENST00000441438 MYCLP12524 364 aaPredicted RBP11.18□□□□□ -0.62
SYNE2-206ENST00000441438 ALADP13716 330 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 VEGFAP15692 232 aaPredicted RBP11.18□□□□□ -0.62
SYNE2-206ENST00000441438 SDSP20132 328 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 PPM1AP35813 382 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 HTD2P86397 168 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 MAPRE2Q15555 327 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 LRIT3Q3SXY7 679 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 TRAPPC3LQ5T215 181 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 TPTE2Q6XPS3 522 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 LBX2Q6XYB7 198 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 CDH26Q8IXH8 852 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 C10orf53Q8N6V4 93 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 DENND6BQ8NEG7 585 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 SUCOQ9UBS9 1254 aaKnown RBP11.18□□□□□ -0.62
SYNE2-206ENST00000441438 CNOT6Q9ULM6 557 aaKnown RBP11.18□□□□□ -0.62
SYNE2-206ENST00000441438 LRCH1Q9Y2L9 728 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 COL5A3P25940 1745 aaPredicted RBP11.18□□□□□ -0.62
SYNE2-206ENST00000441438 ADCY3O60266 1144 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 GJB3O75712 270 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 POU2F1P14859 743 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 U2AF2P26368 475 aaKnown RBP eCLIP11.18□□□□□ -0.62
SYNE2-206ENST00000441438 HAND2P61296 217 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 LASP1Q14847 261 aaKnown RBP11.18□□□□□ -0.62
SYNE2-206ENST00000441438 LLGL1Q15334 1064 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 XKR9Q5GH70 373 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 FDX2Q6P4F2 183 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms