RNA–Protein interactions for RNA: ENST00000441099.5

TRAPPC12-209, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-209ENST00000441099 TYMPP19971 482 aa17.22■□□□□ 0.35
TRAPPC12-209ENST00000441099 SSTR3P32745 418 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC12-209ENST00000441099 SNRNP35Q16560 246 aaKnown RBP17.22■□□□□ 0.35
TRAPPC12-209ENST00000441099 ELMSAN1Q6PJG2 1045 aa17.22■□□□□ 0.35
TRAPPC12-209ENST00000441099 DSTYKQ6XUX3 929 aa17.22■□□□□ 0.35
TRAPPC12-209ENST00000441099 RDH13Q8NBN7 331 aa17.22■□□□□ 0.35
TRAPPC12-209ENST00000441099 CACTINQ8WUQ7 758 aaKnown RBP17.22■□□□□ 0.35
TRAPPC12-209ENST00000441099 KHSRPQ92945 711 aaKnown RBP eCLIP17.22■□□□□ 0.35
TRAPPC12-209ENST00000441099 CCDC47Q96A33 483 aaKnown RBP17.22■□□□□ 0.35
TRAPPC12-209ENST00000441099 ZNF707Q96C28 371 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC12-209ENST00000441099 RHOBTB2Q9BYZ6 727 aa17.22■□□□□ 0.35
TRAPPC12-209ENST00000441099 DMAC2Q9NW81 257 aa17.22■□□□□ 0.35
TRAPPC12-209ENST00000441099 ZDHHC7Q9NXF8 308 aa17.22■□□□□ 0.35
TRAPPC12-209ENST00000441099 FBXL5Q9UKA1 691 aa17.22■□□□□ 0.35
TRAPPC12-209ENST00000441099 PTPRJQ12913 1337 aa17.21■□□□□ 0.35
TRAPPC12-209ENST00000441099 TULP1O00294 542 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC12-209ENST00000441099 PDXKO00764 312 aa17.21■□□□□ 0.35
TRAPPC12-209ENST00000441099 ZMYND10O75800 440 aa17.21■□□□□ 0.35
TRAPPC12-209ENST00000441099 ABLIM3O94929 683 aa17.21■□□□□ 0.35
TRAPPC12-209ENST00000441099 ROR1Q01973 937 aa17.21■□□□□ 0.35
TRAPPC12-209ENST00000441099 YWHAHQ04917 246 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC12-209ENST00000441099 CYP24A1Q07973 514 aa17.21■□□□□ 0.35
TRAPPC12-209ENST00000441099 SURF1Q15526 300 aa17.21■□□□□ 0.35
TRAPPC12-209ENST00000441099 CTXN3Q4LDR2 81 aa17.21■□□□□ 0.35
TRAPPC12-209ENST00000441099 LMBRD2Q68DH5 695 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC12-209ENST00000441099 ZNF280DQ6N043 979 aa17.21■□□□□ 0.35
TRAPPC12-209ENST00000441099 CYP26C1Q6V0L0 522 aa17.21■□□□□ 0.35
TRAPPC12-209ENST00000441099 SLC9A9Q8IVB4 645 aa17.21■□□□□ 0.35
TRAPPC12-209ENST00000441099 ELOA2Q8IYF1 753 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC12-209ENST00000441099 OR5B17Q8NGF7 314 aa17.21■□□□□ 0.35
TRAPPC12-209ENST00000441099 SPATA20Q8TB22 786 aa17.21■□□□□ 0.35
TRAPPC12-209ENST00000441099 RPGRIP1Q96KN7 1286 aa17.21■□□□□ 0.35
TRAPPC12-209ENST00000441099 MFSD14AQ96MC6 490 aa17.21■□□□□ 0.35
TRAPPC12-209ENST00000441099 GZF1Q9H116 711 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC12-209ENST00000441099 INTS13Q9NVM9 706 aa17.21■□□□□ 0.35
TRAPPC12-209ENST00000441099 SIX4Q9UIU6 781 aa17.21■□□□□ 0.35
TRAPPC12-209ENST00000441099 WDR27A2RRH5 827 aa17.2■□□□□ 0.34
TRAPPC12-209ENST00000441099 KIF20AO95235 890 aa17.2■□□□□ 0.34
TRAPPC12-209ENST00000441099 ITGB3P05106 788 aa17.2■□□□□ 0.34
TRAPPC12-209ENST00000441099 CYP11A1P05108 521 aa17.2■□□□□ 0.34
TRAPPC12-209ENST00000441099 ODC1P11926 461 aa17.2■□□□□ 0.34
TRAPPC12-209ENST00000441099 POLR2BP30876 1174 aaKnown RBP17.2■□□□□ 0.34
TRAPPC12-209ENST00000441099 TAF6P49848 677 aa17.2■□□□□ 0.34
TRAPPC12-209ENST00000441099 PSMD6Q15008 389 aa17.2■□□□□ 0.34
TRAPPC12-209ENST00000441099 GUF1Q8N442 669 aaKnown RBP17.2■□□□□ 0.34
TRAPPC12-209ENST00000441099 CSGALNACT2Q8N6G5 542 aa17.2■□□□□ 0.34
TRAPPC12-209ENST00000441099 ZNF461Q8TAF7 563 aa17.2■□□□□ 0.34
TRAPPC12-209ENST00000441099 PRKD2Q9BZL6 878 aa17.2■□□□□ 0.34
TRAPPC12-209ENST00000441099 MTMR12Q9C0I1 747 aa17.2■□□□□ 0.34
TRAPPC12-209ENST00000441099 ITGA11Q9UKX5 1188 aa17.2■□□□□ 0.34
TRAPPC12-209ENST00000441099 AGAP1Q9UPQ3 857 aa17.2■□□□□ 0.34
TRAPPC12-209ENST00000441099 TRAF3IP3Q9Y228 551 aa17.2■□□□□ 0.34
TRAPPC12-209ENST00000441099 CYB561D2O14569 222 aa17.19■□□□□ 0.34
TRAPPC12-209ENST00000441099 EXOC3O60645 756 aa17.19■□□□□ 0.34
TRAPPC12-209ENST00000441099 C8AP07357 584 aa17.19■□□□□ 0.34
TRAPPC12-209ENST00000441099 TMEM191BP0C7N4 346 aa17.19■□□□□ 0.34
TRAPPC12-209ENST00000441099 PNPLA4P41247 253 aa17.19■□□□□ 0.34
TRAPPC12-209ENST00000441099 ARPP19P56211 112 aa17.19■□□□□ 0.34
TRAPPC12-209ENST00000441099 DUOXA2Q1HG44 320 aa17.19■□□□□ 0.34
TRAPPC12-209ENST00000441099 UVSSAQ2YD98 709 aa17.19■□□□□ 0.34
TRAPPC12-209ENST00000441099 OVOS1Q6IE37 1185 aa17.19■□□□□ 0.34
TRAPPC12-209ENST00000441099 RTL10Q7L3V2 364 aa17.19■□□□□ 0.34
TRAPPC12-209ENST00000441099 USP37Q86T82 979 aa17.19■□□□□ 0.34
TRAPPC12-209ENST00000441099 WDR49Q8IV35 697 aa17.19■□□□□ 0.34
TRAPPC12-209ENST00000441099 LRRC52Q8N7C0 313 aa17.19■□□□□ 0.34
TRAPPC12-209ENST00000441099 SMG7Q92540 1137 aaKnown RBP17.19■□□□□ 0.34
TRAPPC12-209ENST00000441099 ERCC4Q92889 916 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC12-209ENST00000441099 ANKRD36BP1Q96IX9 119 aa17.19■□□□□ 0.34
TRAPPC12-209ENST00000441099 GSDMAQ96QA5 445 aa17.19■□□□□ 0.34
TRAPPC12-209ENST00000441099 OXCT2Q9BYC2 517 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC12-209ENST00000441099 MAPK8IP1Q9UQF2 711 aa17.19■□□□□ 0.34
TRAPPC12-209ENST00000441099 PCDHA5Q9Y5H7 936 aa17.19■□□□□ 0.34
TRAPPC12-209ENST00000441099 BDP1A6H8Y1 2624 aa17.19■□□□□ 0.34
TRAPPC12-209ENST00000441099 MYH11P35749 1972 aa17.19■□□□□ 0.34
TRAPPC12-209ENST00000441099 KPNA7A9QM74 516 aa17.18■□□□□ 0.34
TRAPPC12-209ENST00000441099 SMC2O95347 1197 aa17.18■□□□□ 0.34
TRAPPC12-209ENST00000441099 NR3C1P04150 777 aa17.18■□□□□ 0.34
TRAPPC12-209ENST00000441099 HNRNPA1P09651 372 aaKnown RBP eCLIP17.18■□□□□ 0.34
TRAPPC12-209ENST00000441099 DLATP10515 647 aaKnown RBP17.18■□□□□ 0.34
TRAPPC12-209ENST00000441099 ATF2P15336 505 aa17.18■□□□□ 0.34
TRAPPC12-209ENST00000441099 HOXA9P31269 272 aa17.18■□□□□ 0.34
TRAPPC12-209ENST00000441099 RBP5P82980 135 aa17.18■□□□□ 0.34
TRAPPC12-209ENST00000441099 MYBPC2Q14324 1141 aa17.18■□□□□ 0.34
TRAPPC12-209ENST00000441099 SV2CQ496J9 727 aa17.18■□□□□ 0.34
TRAPPC12-209ENST00000441099 PPM1LQ5SGD2 360 aa17.18■□□□□ 0.34
TRAPPC12-209ENST00000441099 LIN9Q5TKA1 542 aa17.18■□□□□ 0.34
TRAPPC12-209ENST00000441099 TPGS2Q68CL5 300 aa17.18■□□□□ 0.34
TRAPPC12-209ENST00000441099 SMYD4Q8IYR2 804 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC12-209ENST00000441099 SLC7A14Q8TBB6 771 aa17.18■□□□□ 0.34
TRAPPC12-209ENST00000441099 PLEKHO2Q8TD55 490 aa17.18■□□□□ 0.34
TRAPPC12-209ENST00000441099 ZNF560Q96MR9 790 aa17.18■□□□□ 0.34
TRAPPC12-209ENST00000441099 FNBP1Q96RU3 617 aa17.18■□□□□ 0.34
TRAPPC12-209ENST00000441099 CGRRF1Q99675 332 aa17.18■□□□□ 0.34
TRAPPC12-209ENST00000441099 RMND1Q9NWS8 449 aa17.18■□□□□ 0.34
TRAPPC12-209ENST00000441099 TDRD15B5MCY1 1934 aaKnown RBP17.17■□□□□ 0.34
TRAPPC12-209ENST00000441099 ARHGEF37A1IGU5 675 aa17.17■□□□□ 0.34
TRAPPC12-209ENST00000441099 OR6C75A6NL08 312 aa17.17■□□□□ 0.34
TRAPPC12-209ENST00000441099 C2CD4DB7Z1M9 353 aa17.17■□□□□ 0.34
TRAPPC12-209ENST00000441099 CALUO43852 315 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC12-209ENST00000441099 KINO60870 393 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms