RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 CDR2Q01850 454 aa6.73□□□□□ -1.33
CNOT1-202ENST00000441024 ANO4Q32M45 955 aa6.73□□□□□ -1.33
CNOT1-202ENST00000441024 FKBP1CQ5VVH2 108 aa6.73□□□□□ -1.33
CNOT1-202ENST00000441024 LMBRD2Q68DH5 695 aaPredicted RBP6.73□□□□□ -1.33
CNOT1-202ENST00000441024 C1orf228Q6PIY5 440 aa6.73□□□□□ -1.33
CNOT1-202ENST00000441024 VGLL2Q8N8G2 317 aa6.73□□□□□ -1.33
CNOT1-202ENST00000441024 PPWD1Q96BP3 646 aaKnown RBP6.73□□□□□ -1.33
CNOT1-202ENST00000441024 CCDC124Q96CT7 223 aaKnown RBP6.73□□□□□ -1.33
CNOT1-202ENST00000441024 MS4A14Q96JA4 679 aa6.73□□□□□ -1.33
CNOT1-202ENST00000441024 GGA3Q9NZ52 723 aa6.73□□□□□ -1.33
CNOT1-202ENST00000441024 SUPT20HL2P0C7V6 817 aa6.73□□□□□ -1.33
CNOT1-202ENST00000441024 GPD1P21695 349 aa6.73□□□□□ -1.33
CNOT1-202ENST00000441024 HOXA10P31260 410 aaPredicted RBP6.73□□□□□ -1.33
CNOT1-202ENST00000441024 COILP38432 576 aaPredicted RBP6.73□□□□□ -1.33
CNOT1-202ENST00000441024 RECQLP46063 649 aaPredicted RBP6.73□□□□□ -1.33
CNOT1-202ENST00000441024 OAZ1P54368 228 aa6.73□□□□□ -1.33
CNOT1-202ENST00000441024 CUL2Q13617 745 aa6.73□□□□□ -1.33
CNOT1-202ENST00000441024 TMEM119Q4V9L6 283 aa6.73□□□□□ -1.33
CNOT1-202ENST00000441024 PLA2G4FQ68DD2 849 aa6.73□□□□□ -1.33
CNOT1-202ENST00000441024 TRIM65Q6PJ69 517 aa6.73□□□□□ -1.33
CNOT1-202ENST00000441024 ADGRA1Q86SQ6 560 aa6.73□□□□□ -1.33
CNOT1-202ENST00000441024 PPHLN1Q8NEY8 458 aaKnown RBP6.73□□□□□ -1.33
CNOT1-202ENST00000441024 RBM15Q96T37 977 aaKnown RBP eCLIP6.73□□□□□ -1.331e-6■■□□□ 14.5
CNOT1-202ENST00000441024 ZSWIM1Q9BR11 485 aa6.73□□□□□ -1.33
CNOT1-202ENST00000441024 IDI2Q9BXS1 227 aa6.73□□□□□ -1.33
CNOT1-202ENST00000441024 EPC1Q9H2F5 836 aa6.73□□□□□ -1.33
CNOT1-202ENST00000441024 SEMA6BQ9H3T3 888 aa6.73□□□□□ -1.33
CNOT1-202ENST00000441024 EML4Q9HC35 981 aaKnown RBP6.73□□□□□ -1.33
CNOT1-202ENST00000441024 NAGPAQ9UK23 515 aa6.73□□□□□ -1.33
CNOT1-202ENST00000441024 ZBTB12Q9Y330 459 aaPredicted RBP6.73□□□□□ -1.33
CNOT1-202ENST00000441024 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.73□□□□□ -1.33
CNOT1-202ENST00000441024 PIK3R2O00459 728 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 CES2O00748 559 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 OGTO15294 1046 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 EIF3HO15372 352 aaKnown RBP eCLIP6.72□□□□□ -1.333e-7■■■■□ 19.5
CNOT1-202ENST00000441024 GCKP35557 465 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 OCRLQ01968 901 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 SNX17Q15036 470 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 PDK1Q15118 436 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 DGKDQ16760 1214 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 BOLA3Q53S33 107 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 FAM47EQ6ZV65 393 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 PID1Q7Z2X4 250 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 SPATA21Q7Z572 469 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 COL23A1Q86Y22 540 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-202ENST00000441024 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.72□□□□□ -1.333e-15■■□□□ 12.3
CNOT1-202ENST00000441024 PDZD8Q8NEN9 1154 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 SLC30A5Q8TAD4 765 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 ACTRT1Q8TDG2 376 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 TMEM117Q9H0C3 514 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 MROH8Q9H579 483 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 KCNQ5Q9NR82 932 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 NEU2Q9Y3R4 380 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.72□□□□□ -1.33
CNOT1-202ENST00000441024 KIF13BQ9NQT8 1826 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 DOT1LQ8TEK3 1739 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 TNPO2O14787 897 aaKnown RBP6.72□□□□□ -1.33
CNOT1-202ENST00000441024 HOXC6P09630 235 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 LCP1P13796 627 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 PCSK1P29120 753 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 TYK2P29597 1187 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 KLK7P49862 253 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 BACE1P56817 501 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 EFCAB12Q6NXP0 572 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 FRA10AC1Q70Z53 315 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 SPATA2LQ8IUW3 424 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-202ENST00000441024 DNERQ8NFT8 737 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 ZNF507Q8TCN5 953 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 CGRRF1Q99675 332 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 TRIM51Q9BSJ1 452 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 KCND1Q9NSA2 647 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 KCNH4Q9UQ05 1017 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 SNX9Q9Y5X1 595 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 DISP2A7MBM2 1401 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 C3orf70A6NLC5 250 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-202ENST00000441024 KCNN4O15554 427 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 SMIM24O75264 130 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 YWHAHQ04917 246 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-202ENST00000441024 NME3Q13232 169 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 VEPH1Q14D04 833 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 RNF219Q5W0B1 726 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-202ENST00000441024 NOTUMQ6P988 496 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 ZNF720Q7Z2F6 126 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 SLC13A5Q86YT5 568 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-202ENST00000441024 DCP1BQ8IZD4 617 aaKnown RBP6.72□□□□□ -1.33
CNOT1-202ENST00000441024 TSPAN17Q96FV3 270 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 PRMT6Q96LA8 375 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-202ENST00000441024 MCEEQ96PE7 176 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 XPO6Q96QU8 1125 aaKnown RBP6.72□□□□□ -1.33
CNOT1-202ENST00000441024 TRIM4Q9C037 500 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 ECT2Q9H8V3 914 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 ZFYVE28Q9HCC9 887 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 TRIM10Q9UDY6 481 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 UBQLN1Q9UMX0 589 aaKnown RBP6.72□□□□□ -1.33
CNOT1-202ENST00000441024 MAGED2Q9UNF1 606 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-202ENST00000441024 TRAF3IP3Q9Y228 551 aa6.72□□□□□ -1.33
CNOT1-202ENST00000441024 NVLO15381 856 aaKnown RBP6.72□□□□□ -1.33
CNOT1-202ENST00000441024 DNAJC8O75937 253 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-202ENST00000441024 LSM8O95777 96 aaKnown RBP6.72□□□□□ -1.33
CNOT1-202ENST00000441024 CYP3A4P08684 503 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms