RNA–Protein interactions for RNA: ENST00000440915.1

AP004290.1-201, humanhuman

BASIC

Gene AP004290.1, Length 1,412 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004290.1-201ENST00000440915 MYO6Q9UM54 1294 aa11.05□□□□□ -0.64
AP004290.1-201ENST00000440915 POLIQ9UNA4 740 aa11.05□□□□□ -0.64
AP004290.1-201ENST00000440915 CASTOR2A6NHX0 329 aa11.04□□□□□ -0.64
AP004290.1-201ENST00000440915 PODXLO00592 558 aa11.04□□□□□ -0.64
AP004290.1-201ENST00000440915 DDHD2O94830 711 aa11.04□□□□□ -0.64
AP004290.1-201ENST00000440915 TBXAS1P24557 533 aaPredicted RBP11.04□□□□□ -0.64
AP004290.1-201ENST00000440915 RPL9P32969 192 aaKnown RBP11.04□□□□□ -0.64
AP004290.1-201ENST00000440915 PNPLA4P41247 253 aa11.04□□□□□ -0.64
AP004290.1-201ENST00000440915 STAT1P42224 750 aa11.04□□□□□ -0.64
AP004290.1-201ENST00000440915 ASPAP45381 313 aa11.04□□□□□ -0.64
AP004290.1-201ENST00000440915 CLCNKBP51801 687 aa11.04□□□□□ -0.64
AP004290.1-201ENST00000440915 EPHB4P54760 987 aa11.04□□□□□ -0.64
AP004290.1-201ENST00000440915 CUL2Q13617 745 aa11.04□□□□□ -0.64
AP004290.1-201ENST00000440915 UPP1Q16831 310 aa11.04□□□□□ -0.64
AP004290.1-201ENST00000440915 WDR72Q3MJ13 1102 aa11.04□□□□□ -0.64
AP004290.1-201ENST00000440915 SFMBT2Q5VUG0 894 aa11.04□□□□□ -0.64
AP004290.1-201ENST00000440915 E4F1Q66K89 784 aaPredicted RBP11.04□□□□□ -0.64
AP004290.1-201ENST00000440915 ZNF365Q70YC5 407 aa11.04□□□□□ -0.64
AP004290.1-201ENST00000440915 ZNF280BQ86YH2 543 aa11.04□□□□□ -0.64
AP004290.1-201ENST00000440915 RSPH1Q8WYR4 309 aa11.04□□□□□ -0.64
AP004290.1-201ENST00000440915 FAXDC2Q96IV6 333 aa11.04□□□□□ -0.64
AP004290.1-201ENST00000440915 ZNF560Q96MR9 790 aa11.04□□□□□ -0.64
AP004290.1-201ENST00000440915 UROC1Q96N76 676 aa11.04□□□□□ -0.64
AP004290.1-201ENST00000440915 ARID3AQ99856 593 aa11.04□□□□□ -0.64
AP004290.1-201ENST00000440915 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.04□□□□□ -0.64
AP004290.1-201ENST00000440915 NXF1Q9UBU9 619 aaKnown RBP11.04□□□□□ -0.64
AP004290.1-201ENST00000440915 TTC3P53804 2025 aa11.04□□□□□ -0.64
AP004290.1-201ENST00000440915 TDRD15B5MCY1 1934 aaKnown RBP11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 TBKBP1A7MCY6 615 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 KPNA7A9QM74 516 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 F8VZ95 297 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 FOXN3O00409 490 aaPredicted RBP11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 SPTLC1O15269 473 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 DGKIO75912 1065 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 PNMA6AP0CW24 399 aaPredicted RBP11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 P4HA1P13674 534 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 ACO1P21399 889 aaKnown RBP11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 FECHP22830 423 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 IGFBP6P24592 240 aaPredicted RBP11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 HNRNPH3P31942 346 aaKnown RBP11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 SOX5P35711 763 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 TAF6P49848 677 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 RNASELQ05823 741 aaKnown RBP11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 DSC1Q08554 894 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 ASIC2Q16515 512 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 MEA1Q16626 185 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 TSR1Q2NL82 804 aaKnown RBP11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 SV2CQ496J9 727 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 TMEM240Q5SV17 173 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 PSRC1Q6PGN9 363 aaPredicted RBP11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 WDR59Q6PJI9 974 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 SCARA5Q6ZMJ2 495 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 GPIHBP1Q8IV16 184 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 TMEM139Q8IV31 216 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 COLGALT2Q8IYK4 626 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 UBR7Q8N806 425 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 SHC3Q92529 594 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 RABGGTAQ92696 567 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 SYN2Q92777 582 aaPredicted RBP11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 JAKMIP2Q96AA8 810 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 DDX27Q96GQ7 796 aaKnown RBP11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 ZNF830Q96NB3 372 aaPredicted RBP11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 FAM193BQ96PV7 902 aaPredicted RBP11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 LBHD1Q9BQE6 289 aaPredicted RBP11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 PAAF1Q9BRP4 392 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 MRPL9Q9BYD2 267 aaKnown RBP11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 BCO2Q9BYV7 579 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 SDCBP2Q9H190 292 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 KCNF1Q9H3M0 494 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 NRDE2Q9H7Z3 1164 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 AIPL1Q9NZN9 384 aa11.03□□□□□ -0.64
AP004290.1-201ENST00000440915 ZBBXA8MT70 800 aa11.02□□□□□ -0.64
AP004290.1-201ENST00000440915 B4GALT3O60512 393 aa11.02□□□□□ -0.64
AP004290.1-201ENST00000440915 GFPT2O94808 682 aa11.02□□□□□ -0.64
AP004290.1-201ENST00000440915 WEE2P0C1S8 567 aa11.02□□□□□ -0.64
AP004290.1-201ENST00000440915 FERP16591 822 aa11.02□□□□□ -0.64
AP004290.1-201ENST00000440915 RAP1GAPP47736 663 aa11.02□□□□□ -0.64
AP004290.1-201ENST00000440915 KCNJ6P48051 423 aa11.02□□□□□ -0.64
AP004290.1-201ENST00000440915 LILRA4P59901 499 aa11.02□□□□□ -0.64
AP004290.1-201ENST00000440915 TNNC1P63316 161 aa11.02□□□□□ -0.64
AP004290.1-201ENST00000440915 CCZ1BP86790 482 aa11.02□□□□□ -0.64
AP004290.1-201ENST00000440915 CCZ1P86791 482 aaPredicted RBP11.02□□□□□ -0.64
AP004290.1-201ENST00000440915 PAN2Q504Q3 1202 aaKnown RBP11.02□□□□□ -0.64
AP004290.1-201ENST00000440915 DCLRE1AQ6PJP8 1040 aa11.02□□□□□ -0.64
AP004290.1-201ENST00000440915 IRF2BP2Q7Z5L9 587 aa11.02□□□□□ -0.64
AP004290.1-201ENST00000440915 TMCO2Q7Z6W1 182 aaPredicted RBP11.02□□□□□ -0.64
AP004290.1-201ENST00000440915 C3orf58Q8NDZ4 430 aa11.02□□□□□ -0.64
AP004290.1-201ENST00000440915 ZNF689Q96CS4 500 aaPredicted RBP11.02□□□□□ -0.64
AP004290.1-201ENST00000440915 TRIM44Q96DX7 344 aaPredicted RBP11.02□□□□□ -0.64
AP004290.1-201ENST00000440915 MMS19Q96T76 1030 aa11.02□□□□□ -0.64
AP004290.1-201ENST00000440915 BAG1Q99933 345 aaPredicted RBP11.02□□□□□ -0.64
AP004290.1-201ENST00000440915 SMYD3Q9H7B4 428 aa11.02□□□□□ -0.64
AP004290.1-201ENST00000440915 ZNHIT6Q9NWK9 470 aaKnown RBP11.02□□□□□ -0.64
AP004290.1-201ENST00000440915 DNAJB4Q9UDY4 337 aa11.02□□□□□ -0.64
AP004290.1-201ENST00000440915 SNX9Q9Y5X1 595 aa11.02□□□□□ -0.64
AP004290.1-201ENST00000440915 SERPING1P05155 500 aa11.01□□□□□ -0.65
AP004290.1-201ENST00000440915 SKILP12757 684 aa11.01□□□□□ -0.65
AP004290.1-201ENST00000440915 KRT5P13647 590 aa11.01□□□□□ -0.65
AP004290.1-201ENST00000440915 CD58P19256 250 aa11.01□□□□□ -0.65
AP004290.1-201ENST00000440915 CLCN1P35523 988 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms