RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 RBM15Q96T37 977 aaKnown RBP eCLIP14.38□□□□□ -0.112e-8■■■■□ 24.1
HERPUD1-204ENST00000439977 ARHGAP28Q9P2N2 729 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 ZNF148Q9UQR1 794 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 F8VP50 259 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 K7ERI5 159 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 BANF1O75531 89 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 CST3P01034 146 aaPredicted RBP14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 IFNB1P01574 187 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 CYP1A1P04798 512 aaPredicted RBP14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 GARTP22102 1010 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 GTF2H1P32780 548 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 STX2P32856 288 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 NOMO3P69849 1222 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 PLCB3Q01970 1234 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 MCPH1Q8NEM0 835 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 SPOCK2Q92563 424 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 TGS1Q96RS0 853 aaKnown RBP14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 MSTO1Q9BUK6 570 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 ATP4AP20648 1035 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 KCNA3P22001 575 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 MAP3K10Q02779 954 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 LIN9Q5TKA1 542 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 ABRAQ8N0Z2 381 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 TMEM130Q8N3G9 435 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 AGBL3Q8NEM8 1001 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 NSUN6Q8TEA1 469 aaKnown RBP14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 SLCO2A1Q92959 643 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 TCHPQ9BT92 498 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 NSRP1Q9H0G5 558 aaKnown RBP14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 SAYSD1Q9NPB0 183 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 PDLIM7Q9NR12 457 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 PPP1R1BQ9UD71 204 aaPredicted RBP14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 USP15Q9Y4E8 981 aaPredicted RBP14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 IVNS1ABPQ9Y6Y0 642 aa14.38□□□□□ -0.11
HERPUD1-204ENST00000439977 ZNF646O15015 1829 aaPredicted RBP14.37□□□□□ -0.11
HERPUD1-204ENST00000439977 RASA4BC9J798 803 aa14.37□□□□□ -0.11
HERPUD1-204ENST00000439977 RASA4O43374 803 aa14.37□□□□□ -0.11
HERPUD1-204ENST00000439977 TNFSF9P41273 254 aa14.37□□□□□ -0.11
HERPUD1-204ENST00000439977 SLC1A1P43005 524 aa14.37□□□□□ -0.11
HERPUD1-204ENST00000439977 DYNLT1P63172 113 aa14.37□□□□□ -0.11
HERPUD1-204ENST00000439977 NOP14P78316 857 aaKnown RBP14.37□□□□□ -0.11
HERPUD1-204ENST00000439977 ITIH4Q14624 930 aa14.37□□□□□ -0.11
HERPUD1-204ENST00000439977 TMEM132BQ14DG7 1078 aa14.37□□□□□ -0.11
HERPUD1-204ENST00000439977 MIS18BP1Q6P0N0 1132 aa14.37□□□□□ -0.11
HERPUD1-204ENST00000439977 MFSD7Q6UXD7 560 aa14.37□□□□□ -0.11
HERPUD1-204ENST00000439977 ENOSF1Q7L5Y1 443 aa14.37□□□□□ -0.11
HERPUD1-204ENST00000439977 CROCCP2Q86T23 111 aa14.37□□□□□ -0.11
HERPUD1-204ENST00000439977 DEPTORQ8TB45 409 aa14.37□□□□□ -0.11
HERPUD1-204ENST00000439977 GRK7Q8WTQ7 553 aa14.37□□□□□ -0.11
HERPUD1-204ENST00000439977 AVENQ9NQS1 362 aaPredicted RBP14.37□□□□□ -0.11
HERPUD1-204ENST00000439977 STK38LQ9Y2H1 464 aa14.37□□□□□ -0.11
HERPUD1-204ENST00000439977 GLRA2P23416 452 aa14.37□□□□□ -0.11
HERPUD1-204ENST00000439977 GHRHRQ02643 423 aa14.37□□□□□ -0.11
HERPUD1-204ENST00000439977 PSMD6Q15008 389 aa14.37□□□□□ -0.11
HERPUD1-204ENST00000439977 TMEM63BQ5T3F8 832 aa14.37□□□□□ -0.11
HERPUD1-204ENST00000439977 CIAPIN1Q6FI81 312 aa14.37□□□□□ -0.11
HERPUD1-204ENST00000439977 SCARA5Q6ZMJ2 495 aa14.37□□□□□ -0.11
HERPUD1-204ENST00000439977 EEPD1Q7L9B9 569 aa14.37□□□□□ -0.11
HERPUD1-204ENST00000439977 RMDN2Q96LZ7 410 aa14.37□□□□□ -0.11
HERPUD1-204ENST00000439977 MCEEQ96PE7 176 aa14.37□□□□□ -0.11
HERPUD1-204ENST00000439977 SLC12A4Q9UP95 1085 aa14.37□□□□□ -0.11
HERPUD1-204ENST00000439977 L3MBTL1Q9Y468 752 aa14.37□□□□□ -0.11
HERPUD1-204ENST00000439977 GHRP10912 638 aa14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 MAP2K2P36507 400 aa14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 MAGEA4P43358 317 aa14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 CNTN2Q02246 1040 aa14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 NFX1Q12986 1120 aaKnown RBP14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 CYP4A22Q5TCH4 519 aa14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 ABHD15Q6UXT9 468 aa14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 CDR2LQ86X02 465 aaPredicted RBP14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 ZNF606Q8WXB4 792 aa14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 GPRASP2Q96D09 838 aa14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 A1CFQ9NQ94 594 aaKnown RBP14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 GJA3Q9Y6H8 435 aa14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 A8MUI8 341 aa14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 DNAJC8O75937 253 aaPredicted RBP14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 RPSAP08865 295 aaKnown RBP14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 WEE2P0C1S8 567 aa14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 BRD2P25440 801 aaKnown RBP14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 HMGB2P26583 209 aaKnown RBP14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 ARSEP51690 589 aa14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 OSTNP61366 133 aa14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 GPS1Q13098 491 aa14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 CCNG2Q16589 344 aa14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 CCDC91Q7Z6B0 441 aa14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 C4orf33Q8N1A6 199 aa14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 FITM2Q8N6M3 262 aa14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 CCDC89Q8N998 374 aa14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 PRCCQ92733 491 aaPredicted RBP14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 ZBED3Q96IU2 234 aaPredicted RBP14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 FAM81BQ96LP2 452 aa14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 WRNIP1Q96S55 665 aa14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 CCDC134Q9H6E4 229 aa14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 ECT2Q9H8V3 914 aa14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 C17orf75Q9HAS0 396 aa14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 NEU2Q9Y3R4 380 aa14.36□□□□□ -0.11
HERPUD1-204ENST00000439977 KRT1P04264 644 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 BACE1P56817 501 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 BPIFB4P59827 614 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms