RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 GDPD5Q8WTR4 605 aa8.13□□□□□ -1.11
COPS3-203ENST00000439936 SCFD1Q8WVM8 642 aa8.13□□□□□ -1.11
COPS3-203ENST00000439936 POMGNT1Q8WZA1 660 aa8.13□□□□□ -1.11
COPS3-203ENST00000439936 ERCC4Q92889 916 aaPredicted RBP8.13□□□□□ -1.11
COPS3-203ENST00000439936 CCDC47Q96A33 483 aaKnown RBP8.13□□□□□ -1.11
COPS3-203ENST00000439936 SCARF2Q96GP6 870 aaPredicted RBP8.13□□□□□ -1.11
COPS3-203ENST00000439936 CCDC34Q96HJ3 373 aa8.13□□□□□ -1.11
COPS3-203ENST00000439936 ZNF558Q96NG5 402 aa8.13□□□□□ -1.11
COPS3-203ENST00000439936 C11orf84Q9BUA3 381 aaPredicted RBP8.13□□□□□ -1.11
COPS3-203ENST00000439936 MSTO1Q9BUK6 570 aa8.13□□□□□ -1.11
COPS3-203ENST00000439936 PCIF1Q9H4Z3 704 aa8.13□□□□□ -1.11
COPS3-203ENST00000439936 TMEM206Q9H813 350 aa8.13□□□□□ -1.11
COPS3-203ENST00000439936 EXOC1Q9NV70 894 aa8.13□□□□□ -1.11
COPS3-203ENST00000439936 AGO2Q9UKV8 859 aaKnown RBP8.13□□□□□ -1.11
COPS3-203ENST00000439936 FAN1Q9Y2M0 1017 aa8.13□□□□□ -1.11
COPS3-203ENST00000439936 PCDHGA11Q9Y5H2 935 aa8.13□□□□□ -1.11
COPS3-203ENST00000439936 MTCH2Q9Y6C9 303 aa8.13□□□□□ -1.11
COPS3-203ENST00000439936 PRRC2BQ5JSZ5 2229 aaKnown RBP8.13□□□□□ -1.11
COPS3-203ENST00000439936 SZT2Q5T011 3432 aa8.13□□□□□ -1.11
COPS3-203ENST00000439936 TTC26A0AVF1 554 aa8.12□□□□□ -1.11
COPS3-203ENST00000439936 LACTBL1A8MY62 500 aa8.12□□□□□ -1.11
COPS3-203ENST00000439936 CLIC2O15247 247 aa8.12□□□□□ -1.11
COPS3-203ENST00000439936 KINO60870 393 aaKnown RBP8.12□□□□□ -1.11
COPS3-203ENST00000439936 ZC3H11AO75152 810 aaKnown RBP eCLIP8.12□□□□□ -1.11
COPS3-203ENST00000439936 LDHAP00338 332 aaKnown RBP8.12□□□□□ -1.11
COPS3-203ENST00000439936 ADRB2P07550 413 aa8.12□□□□□ -1.11
COPS3-203ENST00000439936 KCNE1P15382 129 aa8.12□□□□□ -1.11
COPS3-203ENST00000439936 GARTP22102 1010 aa8.12□□□□□ -1.11
COPS3-203ENST00000439936 DNAJB1P25685 340 aa8.12□□□□□ -1.11
COPS3-203ENST00000439936 OR1G1P47890 313 aa8.12□□□□□ -1.11
COPS3-203ENST00000439936 ACOT2P49753 483 aa8.12□□□□□ -1.11
COPS3-203ENST00000439936 PLCB3Q01970 1234 aa8.12□□□□□ -1.11
COPS3-203ENST00000439936 GRIK3Q13003 919 aa8.12□□□□□ -1.11
COPS3-203ENST00000439936 KYAT1Q16773 422 aa8.12□□□□□ -1.11
COPS3-203ENST00000439936 KNOP1Q1ED39 458 aaKnown RBP8.12□□□□□ -1.11
COPS3-203ENST00000439936 SLC39A11Q8N1S5 342 aa8.12□□□□□ -1.11
COPS3-203ENST00000439936 KIAA0895Q8NCT3 520 aa8.12□□□□□ -1.11
COPS3-203ENST00000439936 SPATA20Q8TB22 786 aa8.12□□□□□ -1.11
COPS3-203ENST00000439936 RNF217Q8TC41 542 aa8.12□□□□□ -1.11
COPS3-203ENST00000439936 POF1BQ8WVV4 589 aa8.12□□□□□ -1.11
COPS3-203ENST00000439936 RABGGTAQ92696 567 aa8.12□□□□□ -1.11
COPS3-203ENST00000439936 ZMAT2Q96NC0 199 aaKnown RBP8.12□□□□□ -1.11
COPS3-203ENST00000439936 GSDMAQ96QA5 445 aa8.12□□□□□ -1.11
COPS3-203ENST00000439936 PPP1R10Q96QC0 940 aaKnown RBP8.12□□□□□ -1.11
COPS3-203ENST00000439936 RPS6KC1Q96S38 1066 aa8.12□□□□□ -1.11
COPS3-203ENST00000439936 CBWD1Q9BRT8 395 aa8.12□□□□□ -1.11
COPS3-203ENST00000439936 TMEM175Q9BSA9 504 aa8.12□□□□□ -1.11
COPS3-203ENST00000439936 VRTNQ9H8Y1 702 aa8.12□□□□□ -1.11
COPS3-203ENST00000439936 RPF1Q9H9Y2 349 aaKnown RBP8.12□□□□□ -1.11
COPS3-203ENST00000439936 PLEKHA5Q9HAU0 1116 aa8.12□□□□□ -1.11
COPS3-203ENST00000439936 TOPORSQ9NS56 1045 aaPredicted RBP8.12□□□□□ -1.11
COPS3-203ENST00000439936 LMCD1Q9NZU5 365 aa8.12□□□□□ -1.11
COPS3-203ENST00000439936 CPSF3Q9UKF6 684 aaKnown RBP8.12□□□□□ -1.11
COPS3-203ENST00000439936 ANK1P16157 1881 aa8.12□□□□□ -1.11
COPS3-203ENST00000439936 PDCD11Q14690 1871 aaKnown RBP8.12□□□□□ -1.11
COPS3-203ENST00000439936 ZMYM2Q9UBW7 1377 aa8.12□□□□□ -1.11
COPS3-203ENST00000439936 GOLGA8IPA6NC78 632 aa8.11□□□□□ -1.11
COPS3-203ENST00000439936 GOLGA8JA6NMD2 632 aa8.11□□□□□ -1.11
COPS3-203ENST00000439936 CXCL8P10145 99 aa8.11□□□□□ -1.11
COPS3-203ENST00000439936 IGFBP6P24592 240 aaPredicted RBP8.11□□□□□ -1.11
COPS3-203ENST00000439936 PTGIRP43119 386 aa8.11□□□□□ -1.11
COPS3-203ENST00000439936 MARSP56192 900 aaKnown RBP8.11□□□□□ -1.11
COPS3-203ENST00000439936 ERVFC1P60507 584 aa8.11□□□□□ -1.11
COPS3-203ENST00000439936 CLDN10P78369 228 aa8.11□□□□□ -1.11
COPS3-203ENST00000439936 KRT17Q04695 432 aa8.11□□□□□ -1.11
COPS3-203ENST00000439936 SOX4Q06945 474 aaPredicted RBP8.11□□□□□ -1.11
COPS3-203ENST00000439936 SPAG1Q07617 926 aa8.11□□□□□ -1.11
COPS3-203ENST00000439936 TUSC3Q13454 348 aa8.11□□□□□ -1.11
COPS3-203ENST00000439936 CCDC85BQ15834 202 aaPredicted RBP8.11□□□□□ -1.11
COPS3-203ENST00000439936 ZBTB6Q15916 424 aa8.11□□□□□ -1.11
COPS3-203ENST00000439936 ENOX2Q16206 610 aaKnown RBP8.11□□□□□ -1.11
COPS3-203ENST00000439936 BMT2Q1RMZ1 405 aa8.11□□□□□ -1.11
COPS3-203ENST00000439936 GLRA4Q5JXX5 417 aa8.11□□□□□ -1.11
COPS3-203ENST00000439936 ISM2Q6H9L7 571 aa8.11□□□□□ -1.11
COPS3-203ENST00000439936 ARMCX5Q6P1M9 558 aa8.11□□□□□ -1.11
COPS3-203ENST00000439936 TMEM173Q86WV6 379 aaPredicted RBP8.11□□□□□ -1.11
COPS3-203ENST00000439936 BCL7CQ8WUZ0 217 aaPredicted RBP8.11□□□□□ -1.11
COPS3-203ENST00000439936 SMARCE1Q969G3 411 aa8.11□□□□□ -1.11
COPS3-203ENST00000439936 MRPL38Q96DV4 380 aaKnown RBP8.11□□□□□ -1.11
COPS3-203ENST00000439936 SAAL1Q96ER3 474 aa8.11□□□□□ -1.11
COPS3-203ENST00000439936 IGSF21Q96ID5 467 aa8.11□□□□□ -1.11
COPS3-203ENST00000439936 SNX27Q96L92 541 aa8.11□□□□□ -1.11
COPS3-203ENST00000439936 GBP4Q96PP9 640 aa8.11□□□□□ -1.11
COPS3-203ENST00000439936 PAAF1Q9BRP4 392 aa8.11□□□□□ -1.11
COPS3-203ENST00000439936 FAM213AQ9BRX8 229 aa8.11□□□□□ -1.11
COPS3-203ENST00000439936 COLEC11Q9BWP8 271 aa8.11□□□□□ -1.11
COPS3-203ENST00000439936 LMAN2LQ9H0V9 348 aa8.11□□□□□ -1.11
COPS3-203ENST00000439936 CNTN3Q9P232 1028 aa8.11□□□□□ -1.11
COPS3-203ENST00000439936 CACNG4Q9UBN1 327 aa8.11□□□□□ -1.11
COPS3-203ENST00000439936 PUF60Q9UHX1 559 aaKnown RBP8.11□□□□□ -1.11
COPS3-203ENST00000439936 HOOK1Q9UJC3 728 aaKnown RBP8.11□□□□□ -1.11
COPS3-203ENST00000439936 MAPK8IP1Q9UQF2 711 aa8.11□□□□□ -1.11
COPS3-203ENST00000439936 STXBP5LQ9Y2K9 1186 aa8.11□□□□□ -1.11
COPS3-203ENST00000439936 CARNS1A5YM72 827 aa8.1□□□□□ -1.11
COPS3-203ENST00000439936 CASTOR2A6NHX0 329 aa8.1□□□□□ -1.11
COPS3-203ENST00000439936 F8W810 466 aa8.1□□□□□ -1.11
COPS3-203ENST00000439936 EXTL3O43909 919 aa8.1□□□□□ -1.11
COPS3-203ENST00000439936 SMC2O95347 1197 aa8.1□□□□□ -1.11
COPS3-203ENST00000439936 CXCL14O95715 111 aa8.1□□□□□ -1.11
COPS3-203ENST00000439936 EFEMP2O95967 443 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms