RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 BMT2Q1RMZ1 405 aa26.76■■□□□ 1.87
RAPGEF1-206ENST00000438647 OTOP3Q7RTS5 596 aa26.76■■□□□ 1.87
RAPGEF1-206ENST00000438647 EFCAB13Q8IY85 973 aa26.76■■□□□ 1.87
RAPGEF1-206ENST00000438647 TMEM130Q8N3G9 435 aa26.76■■□□□ 1.87
RAPGEF1-206ENST00000438647 ZNF461Q8TAF7 563 aa26.76■■□□□ 1.87
RAPGEF1-206ENST00000438647 CACTINQ8WUQ7 758 aaKnown RBP26.76■■□□□ 1.87
RAPGEF1-206ENST00000438647 ZNF707Q96C28 371 aaPredicted RBP26.76■■□□□ 1.87
RAPGEF1-206ENST00000438647 WDR6Q9NNW5 1121 aaKnown RBP26.76■■□□□ 1.87
RAPGEF1-206ENST00000438647 HSPBP1Q9NZL4 362 aa26.76■■□□□ 1.87
RAPGEF1-206ENST00000438647 FBXL5Q9UKA1 691 aa26.76■■□□□ 1.87
RAPGEF1-206ENST00000438647 ANK1P16157 1881 aa26.76■■□□□ 1.87
RAPGEF1-206ENST00000438647 ZNF233A6NK53 670 aa26.75■■□□□ 1.87
RAPGEF1-206ENST00000438647 C2CD4DB7Z1M9 353 aa26.75■■□□□ 1.87
RAPGEF1-206ENST00000438647 TULP1O00294 542 aaPredicted RBP26.75■■□□□ 1.87
RAPGEF1-206ENST00000438647 KLRC4O43908 158 aa26.75■■□□□ 1.87
RAPGEF1-206ENST00000438647 ODC1P11926 461 aa26.75■■□□□ 1.87
RAPGEF1-206ENST00000438647 SURF1Q15526 300 aa26.75■■□□□ 1.87
RAPGEF1-206ENST00000438647 NELFCDQ8IXH7 590 aa26.75■■□□□ 1.87
RAPGEF1-206ENST00000438647 ZSWIM2Q8NEG5 633 aa26.75■■□□□ 1.87
RAPGEF1-206ENST00000438647 SLC7A14Q8TBB6 771 aa26.75■■□□□ 1.87
RAPGEF1-206ENST00000438647 CCDC47Q96A33 483 aaKnown RBP26.75■■□□□ 1.87
RAPGEF1-206ENST00000438647 AGPAT3Q9NRZ7 376 aa26.75■■□□□ 1.87
RAPGEF1-206ENST00000438647 CLUHO75153 1309 aa26.74■■□□□ 1.87
RAPGEF1-206ENST00000438647 PPEF2O14830 753 aa26.74■■□□□ 1.87
RAPGEF1-206ENST00000438647 TGFB1I1O43294 461 aa26.74■■□□□ 1.87
RAPGEF1-206ENST00000438647 XYLBO75191 536 aa26.74■■□□□ 1.87
RAPGEF1-206ENST00000438647 OAZ2O95190 189 aa26.74■■□□□ 1.87
RAPGEF1-206ENST00000438647 TYMPP19971 482 aa26.74■■□□□ 1.87
RAPGEF1-206ENST00000438647 ELF1P32519 619 aa26.74■■□□□ 1.87
RAPGEF1-206ENST00000438647 TAF6P49848 677 aa26.74■■□□□ 1.87
RAPGEF1-206ENST00000438647 TFAMQ00059 246 aaKnown RBP26.74■■□□□ 1.87
RAPGEF1-206ENST00000438647 KNOP1Q1ED39 458 aaKnown RBP26.74■■□□□ 1.87
RAPGEF1-206ENST00000438647 KMT5BQ4FZB7 885 aa26.74■■□□□ 1.87
RAPGEF1-206ENST00000438647 TPGS2Q68CL5 300 aa26.74■■□□□ 1.87
RAPGEF1-206ENST00000438647 ZDHHC14Q8IZN3 488 aa26.74■■□□□ 1.87
RAPGEF1-206ENST00000438647 GOLGA5Q8TBA6 731 aa26.74■■□□□ 1.87
RAPGEF1-206ENST00000438647 FEZF2Q8TBJ5 459 aa26.74■■□□□ 1.87
RAPGEF1-206ENST00000438647 WDR27A2RRH5 827 aa26.73■■□□□ 1.87
RAPGEF1-206ENST00000438647 ABLIM3O94929 683 aa26.73■■□□□ 1.87
RAPGEF1-206ENST00000438647 ZNF202O95125 648 aa26.73■■□□□ 1.87
RAPGEF1-206ENST00000438647 POU2F2P09086 479 aa26.73■■□□□ 1.87
RAPGEF1-206ENST00000438647 ARPP19P56211 112 aa26.73■■□□□ 1.87
RAPGEF1-206ENST00000438647 TMEM31Q5JXX7 168 aa26.73■■□□□ 1.87
RAPGEF1-206ENST00000438647 KRBA2Q6ZNG9 492 aa26.73■■□□□ 1.87
RAPGEF1-206ENST00000438647 SENP8Q96LD8 212 aa26.73■■□□□ 1.87
RAPGEF1-206ENST00000438647 ZNF560Q96MR9 790 aa26.73■■□□□ 1.87
RAPGEF1-206ENST00000438647 GOLPH3LQ9H4A5 285 aa26.73■■□□□ 1.87
RAPGEF1-206ENST00000438647 DSEQ9UL01 958 aa26.73■■□□□ 1.87
RAPGEF1-206ENST00000438647 C2orf16Q68DN1 1984 aa26.73■■□□□ 1.87
RAPGEF1-206ENST00000438647 DENND4AQ7Z401 1863 aa26.72■■□□□ 1.87
RAPGEF1-206ENST00000438647 GPR37L1O60883 481 aa26.72■■□□□ 1.87
RAPGEF1-206ENST00000438647 ATF2P15336 505 aa26.72■■□□□ 1.87
RAPGEF1-206ENST00000438647 PNPLA4P41247 253 aa26.72■■□□□ 1.87
RAPGEF1-206ENST00000438647 SV2CQ496J9 727 aa26.72■■□□□ 1.87
RAPGEF1-206ENST00000438647 OVOS1Q6IE37 1185 aa26.72■■□□□ 1.87
RAPGEF1-206ENST00000438647 PDE11AQ9HCR9 933 aa26.72■■□□□ 1.87
RAPGEF1-206ENST00000438647 MAFFQ9ULX9 164 aa26.72■■□□□ 1.87
RAPGEF1-206ENST00000438647 TIMM13Q9Y5L4 95 aaPredicted RBP26.72■■□□□ 1.87
RAPGEF1-206ENST00000438647 OR6C75A6NL08 312 aa26.71■■□□□ 1.87
RAPGEF1-206ENST00000438647 RPN1P04843 607 aaKnown RBP26.71■■□□□ 1.87
RAPGEF1-206ENST00000438647 TMEM191BP0C7N4 346 aa26.71■■□□□ 1.87
RAPGEF1-206ENST00000438647 CPB1P15086 417 aa26.71■■□□□ 1.87
RAPGEF1-206ENST00000438647 WNT7BP56706 349 aa26.71■■□□□ 1.87
RAPGEF1-206ENST00000438647 STK4Q13043 487 aa26.71■■□□□ 1.87
RAPGEF1-206ENST00000438647 CBWD2Q8IUF1 395 aa26.71■■□□□ 1.87
RAPGEF1-206ENST00000438647 C12orf56Q8IXR9 622 aa26.71■■□□□ 1.87
RAPGEF1-206ENST00000438647 XXYLT1Q8NBI6 393 aa26.71■■□□□ 1.87
RAPGEF1-206ENST00000438647 ANKRD36BP1Q96IX9 119 aa26.71■■□□□ 1.87
RAPGEF1-206ENST00000438647 ITGA11Q9UKX5 1188 aa26.71■■□□□ 1.87
RAPGEF1-206ENST00000438647 CIZ1Q9ULV3 898 aaPredicted RBP26.71■■□□□ 1.87
RAPGEF1-206ENST00000438647 PRRG1O14668 218 aa26.7■■□□□ 1.86
RAPGEF1-206ENST00000438647 SPTLC1O15269 473 aa26.7■■□□□ 1.86
RAPGEF1-206ENST00000438647 KIF20AO95235 890 aa26.7■■□□□ 1.86
RAPGEF1-206ENST00000438647 SNRNP35Q16560 246 aaKnown RBP26.7■■□□□ 1.86
RAPGEF1-206ENST00000438647 PTPN21Q16825 1174 aa26.7■■□□□ 1.86
RAPGEF1-206ENST00000438647 KIAA0895Q8NCT3 520 aa26.7■■□□□ 1.86
RAPGEF1-206ENST00000438647 AFF4Q9UHB7 1163 aaKnown RBP26.7■■□□□ 1.86
RAPGEF1-206ENST00000438647 POLIQ9UNA4 740 aa26.7■■□□□ 1.86
RAPGEF1-206ENST00000438647 R3HCC1Q9Y3T6 440 aaKnown RBP26.7■■□□□ 1.86
RAPGEF1-206ENST00000438647 CLIC2O15247 247 aa26.69■■□□□ 1.86
RAPGEF1-206ENST00000438647 CCL16O15467 120 aa26.69■■□□□ 1.86
RAPGEF1-206ENST00000438647 ITGB3P05106 788 aa26.69■■□□□ 1.86
RAPGEF1-206ENST00000438647 CYP11A1P05108 521 aa26.69■■□□□ 1.86
RAPGEF1-206ENST00000438647 CYP2J2P51589 502 aa26.69■■□□□ 1.86
RAPGEF1-206ENST00000438647 METTL23Q86XA0 190 aa26.69■■□□□ 1.86
RAPGEF1-206ENST00000438647 TCEAL8Q8IYN2 117 aa26.69■■□□□ 1.86
RAPGEF1-206ENST00000438647 C1orf127Q8N9H9 656 aa26.69■■□□□ 1.86
RAPGEF1-206ENST00000438647 EDAQ92838 391 aa26.69■■□□□ 1.86
RAPGEF1-206ENST00000438647 CYP4F11Q9HBI6 524 aa26.69■■□□□ 1.86
RAPGEF1-206ENST00000438647 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.69■■□□□ 1.862e-8■■■■■ 28.8
RAPGEF1-206ENST00000438647 KPNA7A9QM74 516 aa26.68■■□□□ 1.86
RAPGEF1-206ENST00000438647 CYB561D2O14569 222 aa26.68■■□□□ 1.86
RAPGEF1-206ENST00000438647 LRG1P02750 347 aa26.68■■□□□ 1.86
RAPGEF1-206ENST00000438647 POLR2BP30876 1174 aaKnown RBP26.68■■□□□ 1.86
RAPGEF1-206ENST00000438647 GBP2P32456 591 aaPredicted RBP26.68■■□□□ 1.86
RAPGEF1-206ENST00000438647 DPYDQ12882 1025 aa26.68■■□□□ 1.86
RAPGEF1-206ENST00000438647 MYBPC2Q14324 1141 aa26.68■■□□□ 1.86
RAPGEF1-206ENST00000438647 GRASPQ7Z6J2 395 aaPredicted RBP26.68■■□□□ 1.86
RAPGEF1-206ENST00000438647 WDR49Q8IV35 697 aa26.68■■□□□ 1.86
RAPGEF1-206ENST00000438647 LRRC52Q8N7C0 313 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms